bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0247_orf2 Length=417 Score E Sequences producing significant alignments: (Bits) Value 69293.ENSGACP00000007352 164 5e-39 > 69293.ENSGACP00000007352 Length=396 Score = 164 bits (415), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 125/366 (34%), Positives = 181/366 (49%), Gaps = 28/366 (7%) Query 55 NFVFSPFSIFSVFHTAQRGAAGETREQMDALVGPTESFDIPELMQPPQKD-----GAVAV 109 N SP SI S GA G+T QM + + + Q D + + Sbjct 51 NIFVSPLSISSALAMVYLGAKGDTAAQMAKALSFSSGESVHGDFQTLNGDINSPSASYIL 110 Query 110 DVANRLYVHPGLEDNKQFNKFKQELEKEKQS-AETLDFSDGVAAAD-KINTFVATTTRDH 167 +ANRLY G F + +K Q+ + +DF A +IN++V T + Sbjct 111 KLANRLY---GENTANFLPLFLKATQKHYQADLKAVDFMGAPEACRMEINSWVEQQTENK 167 Query 168 IKNLISPSALGAQTRLVLVNALYFKAPWLQQFEGASTSQGVF-FTPSGPKQVMFMKGKLD 226 IK+L+ P + TRL LVNA+YFK WL +F+ A+T + F + KQV M ++ Sbjct 168 IKDLLKPGTVTPMTRLALVNAIYFKGNWLNRFDPANTKEMSFKVNQNEAKQVQMMY-QMK 226 Query 227 KAPLLVSMKREALAVGLPYTDPRLRLYIVMPEDLASFEKSMISDPQILEKTFADMESSAM 286 K P + + LPY D L ++I++PE+ A SDP + EK M Sbjct 227 KLPYNYVPELGLQILELPYVDEELSMFILLPEESADG-----SDPLLKEKLGEWTNRRNM 281 Query 287 DRSFEEELFLTLPKFKLSADDNKVDLTEIFGRLGATDMFDMAKADFTGITGDRDLFVSSF 346 D E+ + LPKFKL D +L+E +LG TD+F AKAD +G+ G+R LF+S+ Sbjct 282 D--VHSEVLVHLPKFKLEED---YELSEPLAKLGMTDVFCGAKADLSGMNGERGLFLSTV 336 Query 347 VHQADIDVNEEGTEATAASAMIMMLRAMPMPKTPIHVTVDKPFIFQLRFVDGDTNLILFS 406 H+A ++VNEEGTEA AA+ + ++L + H T D PFIF +R T ILF Sbjct 337 AHKAFVEVNEEGTEAAAATVVTVLLCSF----REEHFTADHPFIFFIR--HNKTKAILFL 390 Query 407 GRVADP 412 GR + P Sbjct 391 GRFSSP 396 Lambda K H 0.318 0.133 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 168781316990 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40