bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0172_orf1 Length=139 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_1840 129 3e-29 > 5807.cgd7_1840 Length=676 Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 57/109 (52%), Positives = 79/109 (72%), Gaps = 0/109 (0%) Query 26 IRLVMELCTGKELYERLLQKRKYNEKDAAKIVWQMLAAVNHCHQHNICHRDIKLENWVYL 85 I LVMELCTG EL+ER++ KR + E DAA+I+ +L+AV +CH+ N+ HRD+K EN+++L Sbjct 276 IYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFL 335 Query 86 DEREDAPLKLIDFGFSCLFSGGNSMRAMKGTIYYVAPEVLDGQYNQLCN 134 + D+PLKLIDFG + F G MR GT YYV+P+VL+G Y C+ Sbjct 336 TDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECD 384 Lambda K H 0.318 0.131 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23001752095 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40