bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0167_orf1 Length=150 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd2_1300 151 7e-36 > 5807.cgd2_1300 Length=677 Score = 151 bits (381), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 77/146 (52%), Positives = 106/146 (72%), Gaps = 3/146 (2%) Query 8 INIYNNSSSSCLSVRLGSDLIERFKSFQRLNKLKRLAITCVAYQLTDKEIGILHDTFSLL 67 I+ N + ++ + + + L+ RF+ FQR +KLK+LA+TCVAY L D +IG L FS L Sbjct 443 ISSPNTADATYFTNDVCNSLLARFRDFQRQSKLKKLALTCVAYHLNDADIGALQKLFSTL 502 Query 68 DKNNDGVLTLNEL---LNGLQLCGVQGEEIINIIKEIDTDKNGTIDYTEFIAASLDHKIY 124 D+N DGVLT+NE+ L+ +Q G++I N++ E+DTD NG IDYTEFIAAS+DHK+Y Sbjct 503 DRNGDGVLTINEIRSALHKIQNVSQLGDDIDNLLMELDTDGNGRIDYTEFIAASIDHKLY 562 Query 125 EQESAIQNAFRVFDLDGDGKISVEEL 150 EQES + AF+VFDLD DG+IS +EL Sbjct 563 EQESLCKAAFKVFDLDMDGRISPQEL 588 Lambda K H 0.317 0.139 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22764965652 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40