bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0132_orf3 Length=147 Score E Sequences producing significant alignments: (Bits) Value 160488.PP_3195 270 8e-72 > 160488.PP_3195 Length=420 Score = 270 bits (691), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 123/147 (83%), Positives = 138/147 (93%), Gaps = 0/147 (0%) Query 1 LPRWLAQRGVSSLVIDQPGTGEALRLHGMTAVYNSEVWASKVVDWLETRSDVDPKRIGCD 60 LP WLA+RGVSSL++DQPGTGEALRLHGMTA ++SE WAS++VDWLETR+DVD +RIG + Sbjct 206 LPAWLARRGVSSLIVDQPGTGEALRLHGMTARHDSEHWASRIVDWLETRADVDARRIGLE 265 Query 61 GVSLSGYYCPPAVAFEPRFACGVAWGANHDWRDVQKKRLEKEGNFPVPHYWAHVQWVWGA 120 GVSL GYYCP AVAFEPRFACGV WGANHDWRDVQK+RLEKEGNFPVPHYWAHVQWVWGA Sbjct 266 GVSLGGYYCPRAVAFEPRFACGVVWGANHDWRDVQKRRLEKEGNFPVPHYWAHVQWVWGA 325 Query 121 KDMDNFMRIAENVHLDGVVERIKVPFL 147 KD+D+FMRIAENVHLDGV++RI VPFL Sbjct 326 KDLDDFMRIAENVHLDGVLDRIHVPFL 352 Lambda K H 0.322 0.138 0.474 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23033159460 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40