bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0130_orf3 Length=560 Score E Sequences producing significant alignments: (Bits) Value 69293.ENSGACP00000003245 148 5e-34 > 69293.ENSGACP00000003245 Length=484 Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 125/394 (31%), Positives = 181/394 (45%), Gaps = 82/394 (20%) Query 121 EEFSRTTLPFLASVAKHISDLFPK-------GLKHMTRSHPSVHLRRIQVLCLMAASFFG 173 E + LP + +A S+L K G+ H S+ + + QV CL+A +FF Sbjct 97 EHLFDSLLPDMVQLALRASELCTKPIPLLKGGMNH------SITMSQEQVACLLANAFFC 150 Query 174 IIPQKQRKLLRSWGRLRLNALDMHHRGFFEREPKLKALLIYFGSMQKTMSGCWQQMLKDN 233 P++ + +N + + KLK L+ YF S Sbjct 151 TFPRRNSRRNEYCNYPDINFFRLFEGSSQMKIEKLKTLMCYFKS---------------- 194 Query 234 DFTQAKCTATCLCQEITFEGRTRKISPADEIISFYLHTPEATTFEAPEGEQVSRSEVDVS 293 FT+ K T +TF TRK + + P ++ + Sbjct 195 -FTEQKPTGL-----VTF---TRK------------------SLDKP---------LNWT 218 Query 294 KIISQPLPLSGLTVDVHGDITKS-DGDLQVDFADMYVGGLSMWAGHVAQEELIFALRPEL 352 + +Q L+ L + G I G LQVDFA+ +VGG +G V QEE+ F + PEL Sbjct 219 RCSTQ---LTKLHITCEGTIEDDGHGMLQVDFANQFVGGGVTGSGLV-QEEIRFLINPEL 274 Query 353 HVIMLFREALRDDEAVVVKGAESFVLYSGYEGTFQVFPPVVPAGSHWSVHGLAPLDSMGR 412 + LF EAL +E +++KG + + Y+GY T+Q GSH P D R Sbjct 275 IISRLFTEALDPNECLIIKGTQQYSKYTGYSHTYQW------GGSH---RDTTPRDGWQR 325 Query 413 RETTVVAIDAIVVKNEREQYSIQSMKREILKAALGFQGDPFEDVIHETRAGVATGKWGCV 472 R T +VAIDA+ KN EQ++ + RE+ KA GF P E + A VATG WGC Sbjct 326 RCTEIVAIDALQFKNFLEQFNPDKLNRELNKAYCGF-ARPEER--SQNLAAVATGNWGCG 382 Query 473 IFGGDNQLKSLLQWIAATAAGREMHYKAFGDATL 506 +FGGD +LK+LLQ +AA AGR++ Y FGD+ L Sbjct 383 VFGGDARLKALLQMLAAAEAGRDVAYFTFGDSQL 416 Lambda K H 0.321 0.136 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 249870968851 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40