bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_0112_orf1
Length=297
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5671.LinJ34.0080                                                     249    6e-65


> 5671.LinJ34.0080
Length=562

 Score =  249 bits (637),  Expect = 6e-65, Method: Compositional matrix adjust.
 Identities = 132/259 (50%), Positives = 172/259 (66%), Gaps = 17/259 (6%)

Query  45   LSVVVFGASGDLAKRKTYPALFSLFCEGLLPPNVHIVGFARSKLELGDFWRQIAEHLTEL  104
            L+++VFGASGDLAK+KT+PALF L+C GLLPP V+I+G+AR+K++  + W+    H T L
Sbjct  72   LTIIVFGASGDLAKKKTFPALFDLYCGGLLPPEVNIIGYARTKVDDVEKWK----HET-L  126

Query  105  STYFSRQVAPLSSKCEDLVQRFRSICSYICGDGYDDEVALKKLSHHL----DTLEGPDGH  160
              YFS  ++      ED ++      SY CG  YD     K+L   +    +  +GP+  
Sbjct  127  MKYFS-NLSERGCHAEDFLKHI----SYFCG-AYDSVDDFKRLDAVIREKENAFKGPEKG  180

Query  161  NNRLFYLALPPQLFALNVRSIRKHCWTQR--GWNRVVVEKPFGRDSKSSEKLSNELMEVL  218
             NRLFYLALPP +FA    SI K    Q   GW RV++EKPFGRD+KSS +LS  L    
Sbjct  181  GNRLFYLALPPSVFASVCESIHKGAMPQEVGGWVRVIIEKPFGRDTKSSAELSQALEPFF  240

Query  219  QEKEIYRIDHYLGKEMTLSIIALRFANVAFKHLFHRHNVRCVRITFKEDIGTKGRGGYFN  278
             E ++YRIDHYLGKEM  +II  RFAN  F  +++  N+ CV+ITFKE IGT+GRGGYF+
Sbjct  241  DESQLYRIDHYLGKEMVQNIITTRFANRIFSAVWNASNIACVQITFKETIGTEGRGGYFD  300

Query  279  SYGIIRDVMQNHMLQLLTL  297
            S GIIRDVMQNH+ Q+L L
Sbjct  301  SIGIIRDVMQNHLTQILAL  319



Lambda     K      H
   0.324    0.139    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 102013186730


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40