bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0043_orf1 Length=145 Score E Sequences producing significant alignments: (Bits) Value 69293.ENSGACP00000014505 132 4e-30 > 69293.ENSGACP00000014505 Length=186 Score = 132 bits (331), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 56/95 (58%), Positives = 78/95 (82%), Gaps = 0/95 (0%) Query 1 LGFRVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIKELKAVLK 60 LGF+V+F ++VVNVL C +PFGI++ +F+ ++R +ASYE ELHP ATYRIK +KA ++ Sbjct 91 LGFKVRFSAFKVVNVLAVCSMPFGIQLVDFTIKNRPIASYEPELHPAATYRIKHIKATVQ 150 Query 61 IFQTGSITITAPSIQNVQLAVEQIYPLVYEFRKPR 95 +F TGSIT+T P++QNV AVEQIYPL++E RKP+ Sbjct 151 VFSTGSITVTGPNVQNVATAVEQIYPLLFECRKPK 185 Lambda K H 0.316 0.134 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22480264135 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40