bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_3066_orf1
Length=128
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_070770 hypothetical protein ; K12822 RNA-binding pr... 68.9 4e-12
> tgo:TGME49_070770 hypothetical protein ; K12822 RNA-binding
protein 25
Length=779
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 39/53 (73%), Gaps = 0/53 (0%)
Query 76 LRKLDPEAIAAAAENSIYRIAPDGTDRRTYIEEDYRPSRRELERLQNAGRREA 128
L+ ++PE AA+ S+YR+ PDG DRR YI EDYRP RRELERL + RR++
Sbjct 375 LKAMNPELAEAASSCSVYRVGPDGVDRRRYITEDYRPCRRELERLHHLERRDS 427
Lambda K H
0.300 0.118 0.316
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2049573556
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40