bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_2985_orf1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_093610 dihydroorotase protein, putative (EC:3.5.2.3... 114 1e-25
bbo:BBOV_III009670 17.m07839; dihydroorotase (EC:3.5.2.3); K01... 110 1e-24
tpv:TP04_0882 dihydroorotase (EC:3.5.2.3); K01465 dihydroorota... 103 2e-22
pfa:PF14_0697 dihydroorotase, putative; K01465 dihydroorotase ... 84.0 1e-16
sce:YLR420W URA4; Dihydroorotase, catalyzes the third enzymati... 76.6 2e-14
eco:b1062 pyrC, ECK1047, JW1049; dihydro-orotase (EC:3.5.2.3);... 52.8 3e-07
ath:AT4G22930 PYR4; PYR4 (PYRIMIDIN 4); dihydroorotase/ hydrol... 47.8 9e-06
dre:322265 psmd11b, psmd11, wu:fb55b06, zgc:56580, zgc:77763; ... 29.3 3.0
ath:AT5G24280 hypothetical protein 28.5 6.0
dre:503934 psmd11a, im:7148232, wu:fc16c05; proteasome (prosom... 28.5 6.3
hsa:5717 PSMD11, MGC3844, Rpn6, S9, p44.5; proteasome (prosome... 28.1 7.2
mmu:69077 Psmd11, 1700089D09Rik, 1810019E17Rik, 2610024G20Rik,... 28.1 7.7
> tgo:TGME49_093610 dihydroorotase protein, putative (EC:3.5.2.3);
K01465 dihydroorotase [EC:3.5.2.3]
Length=403
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 80/127 (62%), Gaps = 6/127 (4%)
Query 3 IASMSSPCLK---CVCMSSSGNSLWDPS---QALEYRNELLKRDPKVNYLMTLYLCPDVD 56
+A +P +K C C+ N++ + QA YR L++ DP V+Y+MTL+L P+V
Sbjct 43 MAEFVTPMIKKGGCRCVLVMPNTIPPVTTCAQAAAYRERLVRIDPNVDYMMTLFLSPEVS 102
Query 57 PHDLAKNAKASHVVGVKLYPRGVTTNSEAGVEDLTAFDGVFEALQRCGLSLHIHAESPTA 116
DL +NAK HV G+K YP+GVTTNS+ GVE + G+FEA+Q GL+LH+H E P
Sbjct 103 ADDLRQNAKMCHVTGIKSYPKGVTTNSDQGVESYEQYYGIFEAMQELGLTLHLHGEVPGV 162
Query 117 SALKAEE 123
+ L AEE
Sbjct 163 APLDAEE 169
> bbo:BBOV_III009670 17.m07839; dihydroorotase (EC:3.5.2.3); K01465
dihydroorotase [EC:3.5.2.3]
Length=351
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 82/128 (64%), Gaps = 6/128 (4%)
Query 1 GTIASMSSP------CLKCVCMSSSGNSLWDPSQALEYRNELLKRDPKVNYLMTLYLCPD 54
G + S+ +P C + + M ++ + + +QA EYR +L++ +P+V YLMTLYL P+
Sbjct 16 GELMSLVTPLIRHGGCNRVLVMPNTNPPITNCAQAGEYRRQLMQIEPRVTYLMTLYLSPE 75
Query 55 VDPHDLAKNAKASHVVGVKLYPRGVTTNSEAGVEDLTAFDGVFEALQRCGLSLHIHAESP 114
V D+ NAKA+HV G+K YP G+TTNSE G L + +F ++R GLSLHIH E P
Sbjct 76 VSTDDIRLNAKANHVQGIKCYPVGMTTNSEHGFNSLEEYYPLFAEMERLGLSLHIHGEQP 135
Query 115 TASALKAE 122
++ L++E
Sbjct 136 GSNPLRSE 143
> tpv:TP04_0882 dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase
[EC:3.5.2.3]
Length=295
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 63/97 (64%), Gaps = 0/97 (0%)
Query 27 SQALEYRNELLKRDPKVNYLMTLYLCPDVDPHDLAKNAKASHVVGVKLYPRGVTTNSEAG 86
SQALEYR +LL+ DP V YLMTLYL D+ DL NAK HV GVK YP GVTTNS+ G
Sbjct 54 SQALEYRKKLLELDPNVEYLMTLYLTDDLSSEDLRNNAKKCHVQGVKCYPSGVTTNSDRG 113
Query 87 VEDLTAFDGVFEALQRCGLSLHIHAESPTASALKAEE 123
+ +F +++ G+SLH+H E P A L AE+
Sbjct 114 FNSFEKYYPLFSEMEKIGVSLHLHGELPGAPPLTAEK 150
> pfa:PF14_0697 dihydroorotase, putative; K01465 dihydroorotase
[EC:3.5.2.3]
Length=358
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 0/114 (0%)
Query 10 CLKCVCMSSSGNSLWDPSQALEYRNELLKRDPKVNYLMTLYLCPDVDPHDLAKNAKASHV 69
C + + M ++ + S A +Y +L RD + YLMTLYL + D +D+ N ++
Sbjct 35 CNRVLVMPNTHPIISTCSDAQKYLYQLKSRDDDIEYLMTLYLNKNTDENDILSNYYKCNL 94
Query 70 VGVKLYPRGVTTNSEAGVEDLTAFDGVFEALQRCGLSLHIHAESPTASALKAEE 123
GVK+YP VTTNS G+ L + VF AL++ S+HIH E P + L AEE
Sbjct 95 QGVKIYPSNVTTNSSDGITSLEPYYKVFHALEKLNKSIHIHCEEPNINPLYAEE 148
> sce:YLR420W URA4; Dihydroorotase, catalyzes the third enzymatic
step in the de novo biosynthesis of pyrimidines, converting
carbamoyl-L-aspartate into dihydroorotate (EC:3.5.2.3);
K01465 dihydroorotase [EC:3.5.2.3]
Length=364
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query 28 QALEYRNELLKRDPKVNYLMTLYLCPDVDPHDLAKNAKASHVV-GVKLYPRGVTTNSEAG 86
+ +EY+ L K PK +LM+ YL D+ P DL A H + GVK YP GVTTNS AG
Sbjct 53 RVIEYKKTLQKLAPKTTFLMSFYLSKDLTP-DLIHEAAQQHAIRGVKCYPAGVTTNSAAG 111
Query 87 VE--DLTAFDGVFEALQRCGLSLHIHAESPT 115
V+ D +AF +F+A+Q L L++H E P+
Sbjct 112 VDPNDFSAFYPIFKAMQEENLVLNLHGEKPS 142
> eco:b1062 pyrC, ECK1047, JW1049; dihydro-orotase (EC:3.5.2.3);
K01465 dihydroorotase [EC:3.5.2.3]
Length=348
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query 29 ALEYRNELLKRDP---KVNYLMTLYLCPDVDPHDLAKNAKASHVVGVKLYPRGVTTNSEA 85
A+ YR +L P LMT YL +DP++L + KLYP TTNS
Sbjct 56 AVAYRQRILDAVPAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAKLYPANATTNSSH 115
Query 86 GVEDLTAFDGVFEALQRCGLSLHIHAE 112
GV + A V E +++ G+ L +H E
Sbjct 116 GVTSIDAIMPVLERMEKIGMPLLVHGE 142
> ath:AT4G22930 PYR4; PYR4 (PYRIMIDIN 4); dihydroorotase/ hydrolase/
hydrolase, acting on carbon-nitrogen (but not peptide)
bonds, in cyclic amides (EC:3.5.2.3); K01465 dihydroorotase
[EC:3.5.2.3]
Length=377
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query 12 KCVCMSSSGNSLWDPSQALEYRNELLKRDPK---VNYLMTLYLCPDVDPHDLAKNAKASH 68
+ + M + + + A+ YR ++K P + LMTLYL P ++ ++
Sbjct 66 RAIVMPNLKPPVTSTAAAIIYRKFIMKALPSESSFDPLMTLYLTDKTLPEEIRLARESGV 125
Query 69 VVGVKLYPRGVTTNSEAGVEDLTAFDG---VFEALQRCGLSLHIHAE 112
V VKLYP G TTNS+ GV DL F V E + + + L +H E
Sbjct 126 VYAVKLYPAGATTNSQDGVTDL--FGKCLPVLEEMVKQNMPLLVHGE 170
> dre:322265 psmd11b, psmd11, wu:fb55b06, zgc:56580, zgc:77763;
proteasome (prosome, macropain) 216S subunit, non-ATPase,
11b; K03036 26S proteasome regulatory subunit N6
Length=422
Score = 29.3 bits (64), Expect = 3.0, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query 4 ASMSSPCLKCVCMSSSGNSLWDPSQALEYRNELLKRDPKVN-YLMTLY 50
A + LKC+ +S SL D +AL + L+ DP +N +L LY
Sbjct 280 AGRQTDALKCIAQASKNRSLADFEKALTEYTKELRDDPIINTHLAKLY 327
> ath:AT5G24280 hypothetical protein
Length=1607
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query 32 YRNELLKRDPKVNYLMTLYLCPDVDPHDLAKNAKASHVVGVKLYPRGVTTNSEAGVEDLT 91
+RN L++ DP+ M P+ DP K A +++ + + ++S G+ + T
Sbjct 1436 WRNGLVRNDPQKRLAMDNPYLPNGDPIPGFK-GYAVNMIDLASEELDIQSSSGYGLRE-T 1493
Query 92 AFDGVFEALQRCGLSLHIHAESP 114
F GVF LQ + H+ A P
Sbjct 1494 LFYGVFRELQVYETAEHLEAALP 1516
> dre:503934 psmd11a, im:7148232, wu:fc16c05; proteasome (prosome,
macropain) 216S subunit, non-ATPase, 11a; K03036 26S proteasome
regulatory subunit N6
Length=421
Score = 28.5 bits (62), Expect = 6.3, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query 4 ASMSSPCLKCVCMSSSGNSLWDPSQAL-EYRNELLKRDPKVN-YLMTLY 50
A + LKCV +S SL D +AL EY+ E L+ DP ++ +L LY
Sbjct 279 AGRQTEALKCVAQASKNRSLADFEKALTEYKAE-LRDDPIISTHLTKLY 326
> hsa:5717 PSMD11, MGC3844, Rpn6, S9, p44.5; proteasome (prosome,
macropain) 26S subunit, non-ATPase, 11; K03036 26S proteasome
regulatory subunit N6
Length=422
Score = 28.1 bits (61), Expect = 7.2, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query 4 ASMSSPCLKCVCMSSSGNSLWDPSQAL-EYRNELLKRDPKVN-YLMTLY 50
A + LKCV +S SL D +AL +YR E L+ DP ++ +L LY
Sbjct 280 AGRQTEALKCVAQASKNRSLADFEKALTDYRAE-LRDDPIISTHLAKLY 327
> mmu:69077 Psmd11, 1700089D09Rik, 1810019E17Rik, 2610024G20Rik,
2810055C24Rik, C78232, P44.5, S9; proteasome (prosome, macropain)
26S subunit, non-ATPase, 11; K03036 26S proteasome
regulatory subunit N6
Length=422
Score = 28.1 bits (61), Expect = 7.7, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query 4 ASMSSPCLKCVCMSSSGNSLWDPSQAL-EYRNELLKRDPKVN-YLMTLY 50
A + LKCV +S SL D +AL +YR E L+ DP ++ +L LY
Sbjct 280 AGRQTEALKCVAQASKNRSLADFEKALTDYRAE-LRDDPIISTHLAKLY 327
Lambda K H
0.316 0.130 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2069971060
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40