bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_966 164,496 sequences; 82,071,388 total letters Query= Eace_2912_orf2 Length=175 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_098020 DEAD-box ATP-dependent RNA helicase, putativ... 251 7e-67 tpv:TP04_0265 small nuclear ribonucleoprotein; K12858 ATP-depe... 219 5e-57 bbo:BBOV_II003280 18.m06276; DEAD box RNA helicase; K12858 ATP... 197 2e-50 ath:AT2G33730 DEAD box RNA helicase, putative; K12858 ATP-depe... 152 6e-37 hsa:9416 DDX23, MGC8416, PRPF28, U5-100K, U5-100KD, prp28; DEA... 143 3e-34 mmu:74351 Ddx23, 3110082M05Rik, 4921506D17Rik; DEAD (Asp-Glu-A... 143 3e-34 pfa:PFE0925c snrnp protein, putative; K12858 ATP-dependent RNA... 139 5e-33 dre:334283 ddx23, wu:fi39b12, zgc:63742; DEAD (Asp-Glu-Ala-Asp... 136 4e-32 cel:F01F1.7 ddx-23; DEAD boX helicase homolog family member (d... 136 5e-32 ath:AT1G28180 ATP binding / ATP-dependent helicase/ helicase/ ... 89.0 8e-18 cpv:cgd3_3690 U5 snRNP 100 kD protein ; K12858 ATP-dependent R... 86.3 5e-17 sce:YDR243C PRP28; Prp28p (EC:3.6.1.-); K12858 ATP-dependent R... 70.5 3e-12 mmu:212880 Ddx46, 2200005K02Rik, 8430438J23Rik, AI325430, AI95... 66.6 4e-11 hsa:9879 DDX46, FLJ25329, KIAA0801, MGC9936, PRPF5, Prp5; DEAD... 66.6 4e-11 dre:321948 ddx46, fb39a03, wu:fb39a03; DEAD (Asp-Glu-Ala-Asp) ... 66.2 5e-11 ath:AT1G20920 DEAD box RNA helicase, putative; K12811 ATP-depe... 65.1 1e-10 ath:AT3G09620 DEAD/DEAH box helicase, putative 63.2 4e-10 cel:F53H1.1 hypothetical protein; K12811 ATP-dependent RNA hel... 60.8 2e-09 xla:398649 ddx17, MGC80019; DEAD (Asp-Glu-Ala-Asp) box polypep... 60.5 3e-09 ath:AT3G02065 DEAD/DEAH box helicase family protein 60.5 3e-09 ath:AT5G51280 DEAD-box protein abstrakt, putative; K13116 ATP-... 60.5 3e-09 hsa:51428 DDX41, ABS, MGC8828; DEAD (Asp-Glu-Ala-Asp) box poly... 60.1 4e-09 dre:556764 similar to Probable RNA-dependent helicase p72 (DEA... 59.7 4e-09 ath:AT5G63120 ethylene-responsive DEAD box RNA helicase, putat... 59.7 5e-09 mmu:72935 Ddx41, 2900024F02Rik, AA958953, ABS, AI324246; DEAD ... 58.9 8e-09 cpv:cgd7_4600 abstrakt protein SF II helicase + Znknuckle C2HC... 58.9 9e-09 cel:H27M09.1 hypothetical protein; K13116 ATP-dependent RNA he... 58.9 9e-09 xla:399382 ddx5, MGC81559; DEAD (Asp-Glu-Ala-Asp) box polypept... 58.5 1e-08 ath:AT4G33370 DEAD-box protein abstrakt, putative 57.8 2e-08 ath:AT2G42520 DEAD box RNA helicase, putative; K11594 ATP-depe... 57.4 3e-08 ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823 A... 57.0 3e-08 pfa:PFE1390w RNA helicase-1; K13116 ATP-dependent RNA helicase... 57.0 3e-08 ath:AT3G58510 DEAD box RNA helicase, putative (RH11); K11594 A... 56.6 4e-08 ath:AT2G47330 DEAD/DEAH box helicase, putative; K12835 ATP-dep... 56.6 5e-08 ath:AT3G01540 DRH1; DRH1 (DEAD BOX RNA HELICASE 1); ATP-depend... 56.2 5e-08 xla:379390 MGC53795; similar to DEAD/H (Asp-Glu-Ala-Asp/His) b... 56.2 6e-08 dre:394020 ddx41, MGC55896, wu:fb92e02, zgc:55896; DEAD (Asp-G... 55.1 1e-07 hsa:11056 DDX52, HUSSY19, ROK1; DEAD (Asp-Glu-Ala-Asp) box pol... 54.3 2e-07 sce:YNL112W DBP2; Dbp2p (EC:3.6.1.-); K12823 ATP-dependent RNA... 54.3 2e-07 mmu:67040 Ddx17, 2610007K22Rik, A430025E01Rik, AI047725, C8092... 54.3 2e-07 hsa:10521 DDX17, DKFZp761H2016, P72, RH70; DEAD (Asp-Glu-Ala-A... 53.9 3e-07 bbo:BBOV_II004470 18.m06373; p68-like protein; K12823 ATP-depe... 53.9 3e-07 xla:446276 ddx52; DEAD (Asp-Glu-Ala-Asp) box polypeptide 52; K... 53.5 4e-07 mmu:100048658 Ddx43, OTTMUSG00000019690; DEAD (Asp-Glu-Ala-Asp... 53.5 4e-07 tpv:TP02_0316 RNA helicase-1; K13116 ATP-dependent RNA helicas... 53.1 5e-07 ath:AT3G58570 DEAD box RNA helicase, putative; K11594 ATP-depe... 52.4 7e-07 tgo:TGME49_010360 DEAD/DEAH box helicase, putative (EC:5.99.1.... 52.0 1e-06 xla:379217 MGC53409; similar to ATP-dependent, RNA helicase; K... 51.6 1e-06 cel:C46F11.4 hypothetical protein; K12835 ATP-dependent RNA he... 51.6 1e-06 hsa:1655 DDX5, DKFZp434E109, DKFZp686J01190, G17P1, HLR1, HUMP... 51.6 1e-06 > tgo:TGME49_098020 DEAD-box ATP-dependent RNA helicase, putative (EC:2.7.11.25); K12858 ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13] Length=1158 Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 128/174 (73%), Positives = 145/174 (83%), Gaps = 1/174 (0%) Query 2 SEDTMRGDNNPLYQNRLEPQLLFGRGFRAGMDIREQRKANNFYDELVKRRQEYELKQRQR 61 +EDT +GDNNPLYQ R+EPQLLFGRGFRAGMDIREQRK NNFYDELVKRRQE++ K Sbjct 607 AEDTCKGDNNPLYQERMEPQLLFGRGFRAGMDIREQRKQNNFYDELVKRRQEHQ-KAEAS 665 Query 62 GAEEAAAAAATAAAEAARASDKKKVKDMEEEPELEGHWSTKKREEMTDRDWRIFREDFEI 121 AAAAAT A AAR + ++++ E+ + GHW+TKKREEM +RDWRIFREDFEI Sbjct 666 RGAAEAAAAATEAVRAARDAQASRLREKEDAEDNRGHWTTKKREEMNERDWRIFREDFEI 725 Query 122 YLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 Y+KGGRVPPPIRTWAE+ LPWELIEAVK ANY+RPTPIQMQAIPIALE RDLIG Sbjct 726 YIKGGRVPPPIRTWAESALPWELIEAVKHANYDRPTPIQMQAIPIALEQRDLIG 779 > tpv:TP04_0265 small nuclear ribonucleoprotein; K12858 ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13] Length=744 Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 107/175 (61%), Positives = 124/175 (70%), Gaps = 22/175 (12%) Query 2 SEDTMRGDNNPLYQNRLEPQLLFGRGFRAGMDIREQRKANNFYDELVKRRQEYELKQRQR 61 SEDT + +NNP+YQ+R EPQLLFGRGFRAG+D+REQRK NNFYDEL ++R E + Sbjct 218 SEDTTKFENNPIYQDRPEPQLLFGRGFRAGIDVREQRKKNNFYDELSRKRAELPQTTPKP 277 Query 62 GAEEAAAAAATAAAEAARASDKKKVKDMEEEPE-LEGHWSTKKREEMTDRDWRIFREDFE 120 EEE E L HW+ KK EMT+RDWRIFREDFE Sbjct 278 PEPTPKH---------------------EEESEVLSNHWTKKKLSEMTERDWRIFREDFE 316 Query 121 IYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 IY+KGGRVPPPIRTWAE+ LPWEL+EA+K+A Y +PTPIQMQAIPIALEMRDLIG Sbjct 317 IYIKGGRVPPPIRTWAESPLPWELLEAIKKAGYIKPTPIQMQAIPIALEMRDLIG 371 > bbo:BBOV_II003280 18.m06276; DEAD box RNA helicase; K12858 ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13] Length=714 Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 97/178 (54%), Positives = 120/178 (67%), Gaps = 25/178 (14%) Query 2 SEDTMRGDNNPLYQNRLEPQLLFGRGFRAGMDIREQRKANNFYDELVKRRQEYELKQRQR 61 S+DT R DNNP+YQNR EPQLLFGRG RAGMD +EQRK +FYD+L K R Sbjct 183 SDDTSRNDNNPIYQNRPEPQLLFGRGCRAGMDPKEQRKHADFYDKLSKLR---------- 232 Query 62 GAEEAAAAAATAAAEAARASDKKKVKDMEE----EPELEGHWSTKKREEMTDRDWRIFRE 117 ++AA + D + +D E + +++ HWS K +E MT RDWRIFRE Sbjct 233 -----------TGSDAAFSRDSRSNEDRTEPTSVDDDVDTHWSAKTKENMTQRDWRIFRE 281 Query 118 DFEIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 DF+IY+KG RVPPP+RTWAE+ LP EL+ A+K A ++ PTPIQMQAIPI L MRDLIG Sbjct 282 DFDIYVKGTRVPPPMRTWAESNLPSELLRAIKDAGFKSPTPIQMQAIPIGLGMRDLIG 339 > ath:AT2G33730 DEAD box RNA helicase, putative; K12858 ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13] Length=733 Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 86/176 (48%), Positives = 113/176 (64%), Gaps = 15/176 (8%) Query 2 SEDTMRGDNNPLYQNRLEPQLLFGRGFRAGMDIREQRKANNFYDELVKRRQEYELKQRQR 61 +EDT R D N LYQN E QLLFGRGFRAGMD REQ+K + E E++ R Sbjct 193 TEDTSR-DMNVLYQNPHEAQLLFGRGFRAGMDRREQKKQAA--------KHEKEMRDEIR 243 Query 62 GAEEAAAAAATAAAEAAR--ASDKKKVKDMEEEPELEGHWSTKKREEMTDRDWRIFREDF 119 + AAA+ R A+D DM ++ HWS K+ EEMT+RDWRIFREDF Sbjct 244 KKDGIVEKPEEAAAQRVREEAADTYDSFDMR----VDRHWSDKRLEEMTERDWRIFREDF 299 Query 120 EIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 I KG R+P P+R+W E++L EL++AV++A Y++P+PIQM AIP+ L+ RD+IG Sbjct 300 NISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIG 355 > hsa:9416 DDX23, MGC8416, PRPF28, U5-100K, U5-100KD, prp28; DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 (EC:3.6.4.13); K12858 ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13] Length=820 Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 80/176 (45%), Positives = 110/176 (62%), Gaps = 21/176 (11%) Query 1 ASEDTMRGDNNPLYQNRLEPQLLFGRGFRAGMDIREQ-RKANNFYDELVKRRQEYELKQR 59 ASEDT D NPLY+ R + QLL GRGF AG+D+++Q R+ + FY +L+++R+ E K++ Sbjct 278 ASEDTSI-DYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQ 335 Query 60 QRGAEEAAAAAATAAAEAARASDKKKVKDMEEEPELEGHWSTKKREEMTDRDWRIFREDF 119 EEA R D+ HWS KK +EMTDRDWRIFRED+ Sbjct 336 ----EEARLRKLRKKEAKQRWDDR--------------HWSQKKLDEMTDRDWRIFREDY 377 Query 120 EIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 I KGG++P PIR+W ++ LP ++E + + Y+ PTPIQ QAIPI L+ RD+IG Sbjct 378 SITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIG 433 > mmu:74351 Ddx23, 3110082M05Rik, 4921506D17Rik; DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 (EC:3.6.1.-); K12858 ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13] Length=819 Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 80/176 (45%), Positives = 110/176 (62%), Gaps = 21/176 (11%) Query 1 ASEDTMRGDNNPLYQNRLEPQLLFGRGFRAGMDIREQ-RKANNFYDELVKRRQEYELKQR 59 ASEDT D NPLY+ R + QLL GRGF AG+D+++Q R+ + FY +L+++R+ E K++ Sbjct 277 ASEDTSI-DYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQ 334 Query 60 QRGAEEAAAAAATAAAEAARASDKKKVKDMEEEPELEGHWSTKKREEMTDRDWRIFREDF 119 EEA R D+ HWS KK +EMTDRDWRIFRED+ Sbjct 335 ----EEARLRKLRKKEAKQRWDDR--------------HWSQKKLDEMTDRDWRIFREDY 376 Query 120 EIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 I KGG++P PIR+W ++ LP ++E + + Y+ PTPIQ QAIPI L+ RD+IG Sbjct 377 SITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIG 432 > pfa:PFE0925c snrnp protein, putative; K12858 ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13] Length=1123 Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 61/81 (75%), Positives = 69/81 (85%), Gaps = 0/81 (0%) Query 95 LEGHWSTKKREEMTDRDWRIFREDFEIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYE 154 E HWS K REEMTDRDWRIFRED EIY+KGG VPPPIR W E+ L +L++A+K+A YE Sbjct 660 CEKHWSQKSREEMTDRDWRIFREDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYE 719 Query 155 RPTPIQMQAIPIALEMRDLIG 175 +PTPIQMQAIPIALEMRDLIG Sbjct 720 KPTPIQMQAIPIALEMRDLIG 740 Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 40/57 (70%), Positives = 47/57 (82%), Gaps = 0/57 (0%) Query 2 SEDTMRGDNNPLYQNRLEPQLLFGRGFRAGMDIREQRKANNFYDELVKRRQEYELKQ 58 SEDT R D+NPLYQNRLEPQLLFGRG+ AG+D+REQRK NNFYD+LV+ R L + Sbjct 488 SEDTSRNDSNPLYQNRLEPQLLFGRGYIAGIDVREQRKKNNFYDKLVQNRLNMSLNK 544 > dre:334283 ddx23, wu:fi39b12, zgc:63742; DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 (EC:3.6.1.-); K12858 ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13] Length=807 Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 76/176 (43%), Positives = 106/176 (60%), Gaps = 21/176 (11%) Query 1 ASEDTMRGDNNPLYQNRLEPQLLFGRGFRAGMDIREQ-RKANNFYDELVKRRQEYELKQR 59 ASEDT D NP+Y+ + + L +GRGF AG+D+++Q R + FY +L+++R+ E K++ Sbjct 265 ASEDTSI-DYNPIYKEKHQVHL-YGRGFIAGIDLKQQKRDQSRFYGDLMEKRRTNEEKEQ 322 Query 60 QRGAEEAAAAAATAAAEAARASDKKKVKDMEEEPELEGHWSTKKREEMTDRDWRIFREDF 119 EE R D+ HWS KK +EMTDRDWRIFRED+ Sbjct 323 ----EEQRLKKVRKKEAKQRWDDR--------------HWSQKKLDEMTDRDWRIFREDY 364 Query 120 EIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 I KGG++P PIR W E LP ++E +++ Y+ PTPIQ QAIPI L+ RD+IG Sbjct 365 SITTKGGKIPNPIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGLQNRDIIG 420 > cel:F01F1.7 ddx-23; DEAD boX helicase homolog family member (ddx-23); K12858 ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13] Length=730 Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 79/176 (44%), Positives = 101/176 (57%), Gaps = 21/176 (11%) Query 1 ASEDTMRGDNNPLYQNRLEPQLLFGRGFRAGMDIREQRK-ANNFYDELVKRRQEYELKQR 59 A EDT + D N LYQ+R E Q FGRG AG D+ Q+K N+FY E+++ R+ + K++ Sbjct 188 AGEDTSQ-DYNKLYQSRHEIQF-FGRGSVAGTDVNAQKKEKNSFYQEMMENRRTVDEKEQ 245 Query 60 QRGAEEAAAAAATAAAEAARASDKKKVKDMEEEPELEGHWSTKKREEMTDRDWRIFREDF 119 + E A R HW K+ EM+DRDWRIFREDF Sbjct 246 EMHRLEKELKKEKKVAHDDR------------------HWRMKELSEMSDRDWRIFREDF 287 Query 120 EIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 I +KGGRVP P+R W EA P E+ +AVK+ Y PTPIQ QAIPI L+ RD+IG Sbjct 288 NISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIG 343 > ath:AT1G28180 ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding Length=614 Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 59/174 (33%), Positives = 72/174 (41%), Gaps = 67/174 (38%) Query 2 SEDTMRGDNNPLYQNRLEPQLLFGRGFRAGMDIREQRKANNFYDELVKRRQEYELKQRQR 61 +EDT+ G+ N LYQN E Q LFGRG RAG+D REQ+K Sbjct 138 TEDTLSGEMNVLYQNPHEAQPLFGRGCRAGIDRREQKKL--------------------- 176 Query 62 GAEEAAAAAATAAAEAARASDKKKVKDMEEEPELEGHWSTKKREEMTDRDWRIFREDFEI 121 E DK HWS KK EEM +RDWRIF+EDF I Sbjct 177 -------MTGKHEREKREEEDK--------------HWSEKKLEEMNERDWRIFKEDFNI 215 Query 122 YLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 +G ++P P+R W E IP+ LE RD+IG Sbjct 216 SYRGSKIPHPMRNWEE-------------------------TIPLGLEQRDVIG 244 > cpv:cgd3_3690 U5 snRNP 100 kD protein ; K12858 ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13] Length=529 Score = 86.3 bits (212), Expect = 5e-17, Method: Composition-based stats. Identities = 36/70 (51%), Positives = 50/70 (71%), Gaps = 0/70 (0%) Query 106 EMTDRDWRIFREDFEIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIP 165 +MT+RDW+IFRED+ I ++G VP PIR W + + E ++ YE+PTPIQMQ IP Sbjct 115 DMTERDWKIFREDYSINVRGKDVPNPIRNWKDCHVLEIQTELIRNIGYEKPTPIQMQCIP 174 Query 166 IALEMRDLIG 175 I L++RD+IG Sbjct 175 IGLKLRDMIG 184 > sce:YDR243C PRP28; Prp28p (EC:3.6.1.-); K12858 ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13] Length=588 Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 5/94 (5%) Query 87 KDMEEEPELEGHWSTKKREEMTDRDWRIFREDFEIYLKGGRVPPPIRTWAEAE-LPWELI 145 K+ E + HW+ K EM +RDWRI +ED+ I KGG V P+R W E +P +L+ Sbjct 126 KNAAESSYMGKHWTEKSLHEMNERDWRILKEDYAIVTKGGTVENPLRNWEELNIIPRDLL 185 Query 146 EAVKQ-ANYERPTPIQMQAIPIALEM---RDLIG 175 + Q + PTPIQ IP M RD +G Sbjct 186 RVIIQELRFPSPTPIQRITIPNVCNMKQYRDFLG 219 > mmu:212880 Ddx46, 2200005K02Rik, 8430438J23Rik, AI325430, AI957095, MGC116676, MGC31579, mKIAA0801; DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 (EC:3.6.4.13); K12811 ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13] Length=1031 Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 1/71 (1%) Query 106 EMTDRDWRIFREDFE-IYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAI 164 +M+ + +FR + E I +KG P PI++W + + +++ ++K+ YE+PTPIQ QAI Sbjct 344 KMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI 403 Query 165 PIALEMRDLIG 175 P + RDLIG Sbjct 404 PAIMSGRDLIG 414 > hsa:9879 DDX46, FLJ25329, KIAA0801, MGC9936, PRPF5, Prp5; DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 (EC:3.6.4.13); K12811 ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13] Length=1031 Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 1/71 (1%) Query 106 EMTDRDWRIFREDFE-IYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAI 164 +M+ + +FR + E I +KG P PI++W + + +++ ++K+ YE+PTPIQ QAI Sbjct 344 KMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI 403 Query 165 PIALEMRDLIG 175 P + RDLIG Sbjct 404 PAIMSGRDLIG 414 > dre:321948 ddx46, fb39a03, wu:fb39a03; DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 (EC:3.6.4.13); K12811 ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13] Length=1018 Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%) Query 115 FREDFE-IYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDL 173 +R + E I +KG P PI+TW + + +++ A+K+ NYE+PTPIQ QAIP + RDL Sbjct 321 YRLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDL 380 Query 174 IG 175 IG Sbjct 381 IG 382 > ath:AT1G20920 DEAD box RNA helicase, putative; K12811 ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13] Length=828 Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 0/78 (0%) Query 98 HWSTKKREEMTDRDWRIFREDFEIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPT 157 + K MT + +R++ E+ + G VP PI+ W + L ++++ +K+ NYE+P Sbjct 156 YIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPM 215 Query 158 PIQMQAIPIALEMRDLIG 175 PIQ QA+PI + RD IG Sbjct 216 PIQTQALPIIMSGRDCIG 233 > ath:AT3G09620 DEAD/DEAH box helicase, putative Length=989 Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 0/69 (0%) Query 107 MTDRDWRIFREDFEIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPI 166 MT +R++ E+ + G VP PI+ W + L ++++ +K+ NYE+P PIQ QA+PI Sbjct 370 MTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPI 429 Query 167 ALEMRDLIG 175 + RD IG Sbjct 430 IMSGRDCIG 438 > cel:F53H1.1 hypothetical protein; K12811 ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13] Length=970 Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query 107 MTDRDWRIFREDFE-IYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIP 165 MT + + +RE+ + I +KG P PI+TWA+ + +++ +K+ Y +PT IQ QAIP Sbjct 277 MTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIP 336 Query 166 IALEMRDLIG 175 + RD+IG Sbjct 337 SIMSGRDVIG 346 > xla:398649 ddx17, MGC80019; DEAD (Asp-Glu-Ala-Asp) box polypeptide 17; K13178 ATP-dependent RNA helicase DDX17 [EC:3.6.4.13] Length=610 Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 2/95 (2%) Query 83 KKKVKDMEEEPELEGHWSTKKRE--EMTDRDWRIFREDFEIYLKGGRVPPPIRTWAEAEL 140 +KK D+ E P+ E ++ T+ E MT D R EI ++G P P+ + +A Sbjct 30 RKKRWDLNELPKFEKNFYTEHPEVARMTQHDVEELRRKKEITIRGVNCPKPLYAFHQANF 89 Query 141 PWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 P +++ + ++ PTPIQ Q P+AL RD++G Sbjct 90 PQYVLDVLLDQRFKEPTPIQCQGFPLALSGRDMVG 124 > ath:AT3G02065 DEAD/DEAH box helicase family protein Length=505 Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 2/69 (2%) Query 108 TDRDWRIFREDFEIYLKG--GRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIP 165 + D ++ R +I+++G VPPP+ T+ LP +L+ ++ A Y+ PTPIQMQAIP Sbjct 83 SSHDAQLLRRKLDIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIP 142 Query 166 IALEMRDLI 174 AL + L+ Sbjct 143 AALTGKSLL 151 > ath:AT5G51280 DEAD-box protein abstrakt, putative; K13116 ATP-dependent RNA helicase DDX41 [EC:3.6.4.13] Length=591 Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 8/103 (7%) Query 81 SDKKKVKDMEE--------EPELEGHWSTKKREEMTDRDWRIFREDFEIYLKGGRVPPPI 132 SDKK + + E EP L G +M+ + + R+ + I + G +PPPI Sbjct 86 SDKKTLMSVRELAKGITYTEPLLTGWKPPLHIRKMSSKQRDLIRKQWHIIVNGDDIPPPI 145 Query 133 RTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 + + + + P +++ +K+ +PTPIQ+Q +P+ L RD+IG Sbjct 146 KNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIG 188 > hsa:51428 DDX41, ABS, MGC8828; DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 (EC:3.6.4.13); K13116 ATP-dependent RNA helicase DDX41 [EC:3.6.4.13] Length=622 Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 0/61 (0%) Query 115 FREDFEIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLI 174 R+ + I ++G +PPPI+++ E + P ++ +K+ PTPIQ+Q IP L RD+I Sbjct 163 VRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMI 222 Query 175 G 175 G Sbjct 223 G 223 > dre:556764 similar to Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17); K13178 ATP-dependent RNA helicase DDX17 [EC:3.6.4.13] Length=671 Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 2/95 (2%) Query 83 KKKVKDMEEEPELEGHWSTKKRE--EMTDRDWRIFREDFEIYLKGGRVPPPIRTWAEAEL 140 +KK D+++ P+ E ++ + E M+ D +R EI ++G P P+ + +A+ Sbjct 43 RKKKWDLDQLPKFEKNFYNENPEVHHMSQYDVEEYRRKREITVRGSGCPKPVTNFHQAQF 102 Query 141 PWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 P +++ + Q N++ PT IQ Q P+AL RD++G Sbjct 103 PQYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVG 137 > ath:AT5G63120 ethylene-responsive DEAD box RNA helicase, putative (RH30) Length=484 Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 47/71 (66%), Gaps = 0/71 (0%) Query 105 EEMTDRDWRIFREDFEIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAI 164 + MT++D ++R + +I ++G VP P++ + +A P ++EA+ + + PTPIQ Q Sbjct 137 QAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGW 196 Query 165 PIALEMRDLIG 175 P+AL+ RDLIG Sbjct 197 PMALKGRDLIG 207 > mmu:72935 Ddx41, 2900024F02Rik, AA958953, ABS, AI324246; DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 (EC:3.6.4.13); K13116 ATP-dependent RNA helicase DDX41 [EC:3.6.4.13] Length=622 Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 0/61 (0%) Query 115 FREDFEIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLI 174 R+ + I ++G +PPPI+++ E + P ++ +K+ PTPIQ+Q IP L RD+I Sbjct 163 VRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMI 222 Query 175 G 175 G Sbjct 223 G 223 > cpv:cgd7_4600 abstrakt protein SF II helicase + Znknuckle C2HC (PA) ; K13116 ATP-dependent RNA helicase DDX41 [EC:3.6.4.13] Length=570 Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 1/113 (0%) Query 64 EEAAAAAATAAAEAARASDKKKVKDMEEEPELEGHWST-KKREEMTDRDWRIFREDFEIY 122 EE AA + A + + K + E W KK ++ + + R I Sbjct 38 EEKLLAAVNQSYNAPLKAVHEIAKGITFSKREETSWRVPKKYSSLSASECQDLRSRLLIV 97 Query 123 LKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 + G VPPPI ++ + P E+++A+ +P+ IQMQ +PI L RDLIG Sbjct 98 VNGSDVPPPILSFKDMGFPQEILDALASKGISKPSQIQMQGLPIILMGRDLIG 150 > cel:H27M09.1 hypothetical protein; K13116 ATP-dependent RNA helicase DDX41 [EC:3.6.4.13] Length=630 Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 6/80 (7%) Query 97 GHWSTKKREEMTDRDWRIFREDFEIYLKGGRVPPPIRTWAEAELPWELIEAV-KQANYER 155 GH + +E D+ I R+ I +G +PPPI ++ E + P L+E + KQ Sbjct 158 GHIRRQSQE-----DYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVT 212 Query 156 PTPIQMQAIPIALEMRDLIG 175 PT IQ+Q IP+AL RD+IG Sbjct 213 PTAIQIQGIPVALSGRDMIG 232 > xla:399382 ddx5, MGC81559; DEAD (Asp-Glu-Ala-Asp) box polypeptide 5; K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13] Length=608 Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 2/94 (2%) Query 84 KKVKDMEEEPELEGHWSTKKREEM--TDRDWRIFREDFEIYLKGGRVPPPIRTWAEAELP 141 KK +++E P+ E ++ + + + T ++ +R EI ++G P PI + EA P Sbjct 41 KKKWNLDELPKFEKNFYQEHPDVVRRTPQECDQYRRSKEITVRGINCPKPILNFNEASFP 100 Query 142 WELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 ++EA+K+ N+ PTPIQ Q P+AL D++G Sbjct 101 ANVMEAIKRQNFTEPTPIQGQGWPVALSGLDMVG 134 > ath:AT4G33370 DEAD-box protein abstrakt, putative Length=542 Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 10/104 (9%) Query 81 SDKKKVKDMEE--------EPELEGHWSTKKR-EEMTDRDWRIFREDFEIYLKGGRVPPP 131 SDKKK+ + E EP L W +M+ + + R+ + I + G +PPP Sbjct 37 SDKKKLMSVGELARGITYTEP-LSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGEDIPPP 95 Query 132 IRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 I+ + + + P L+ +K PTPIQ+Q +P+ L RD+IG Sbjct 96 IKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIG 139 > ath:AT2G42520 DEAD box RNA helicase, putative; K11594 ATP-dependent RNA helicase [EC:3.6.4.13] Length=633 Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 0/58 (0%) Query 117 EDFEIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLI 174 ED I G VPPP+ T+AE +L L +++ Y +PTP+Q AIPI LE RDL+ Sbjct 143 EDIPIETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLM 200 > ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13] Length=501 Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 0/69 (0%) Query 107 MTDRDWRIFREDFEIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPI 166 MTD + +R+ EI ++G +P P++++ + P ++E VK+A + PTPIQ Q P+ Sbjct 73 MTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPM 132 Query 167 ALEMRDLIG 175 A++ RDLIG Sbjct 133 AMKGRDLIG 141 > pfa:PFE1390w RNA helicase-1; K13116 ATP-dependent RNA helicase DDX41 [EC:3.6.4.13] Length=665 Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 1/130 (0%) Query 47 LVKRRQEYELKQRQRGAEEAAAAAATAAAEAARASDKKKVKDMEEEPELEGHWSTKKREE 106 L K+ E + + R EE A + A A S K++ K + + +E W K+ + Sbjct 130 LEKKNDEIDETEEIRKREEKLLAQVSKALNAPLQSVKERAKGIVYKENVESIWKLPKKYK 189 Query 107 MTDRDW-RIFREDFEIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIP 165 + + + R F I + G +P PI+ + + + P +++ +++ N ++PT IQMQ +P Sbjct 190 LLKKSYVEKIRRIFYIDVNGDDIPAPIKNFKDMKFPKAILKGLRKKNIKKPTQIQMQGLP 249 Query 166 IALEMRDLIG 175 L RD+IG Sbjct 250 SILLGRDIIG 259 > ath:AT3G58510 DEAD box RNA helicase, putative (RH11); K11594 ATP-dependent RNA helicase [EC:3.6.4.13] Length=612 Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 0/59 (0%) Query 117 EDFEIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 ED + GG VPPP+ T+A+ +L L +++ Y RPTP+Q AIPI L RDL+ Sbjct 135 EDIPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMA 193 > ath:AT2G47330 DEAD/DEAH box helicase, putative; K12835 ATP-dependent RNA helicase DDX42 [EC:3.6.4.13] Length=760 Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 0/69 (0%) Query 107 MTDRDWRIFREDFEIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPI 166 MT+++ +R+ I + G V P++T+ + +++ A+K+ YE+PT IQ QA+PI Sbjct 202 MTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPI 261 Query 167 ALEMRDLIG 175 L RD+IG Sbjct 262 VLSGRDVIG 270 > ath:AT3G01540 DRH1; DRH1 (DEAD BOX RNA HELICASE 1); ATP-dependent RNA helicase/ ATPase Length=619 Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 0/55 (0%) Query 120 EIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLI 174 EI + GG+VPPP+ ++ P EL+ V A + PTPIQ Q+ PIA++ RD++ Sbjct 145 EITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIV 199 > xla:379390 MGC53795; similar to DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 5 (RNA helicase, 68kDa); K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13] Length=607 Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 10/98 (10%) Query 84 KKVKDMEEEPELEGHWSTKKREEMTDRDWRI------FREDFEIYLKGGRVPPPIRTWAE 137 KK +++E P+ E ++ +E+ D R +R EI ++G P P+ + E Sbjct 39 KKKWNLDELPKFEKNFY----QELPDVSRRTPQECDQYRRSKEITVRGLNCPKPVLNFHE 94 Query 138 AELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 A P ++E +K+ N+ PTPIQ Q P+AL D++G Sbjct 95 ASFPANVMEVIKRLNFTEPTPIQGQGWPVALSGLDMVG 132 > dre:394020 ddx41, MGC55896, wu:fb92e02, zgc:55896; DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 (EC:3.6.4.13); K13116 ATP-dependent RNA helicase DDX41 [EC:3.6.4.13] Length=306 Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 0/60 (0%) Query 116 REDFEIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 R+ + I ++G +P PI+++ E + P +++ +K+ PTPIQ+Q IP L RD+IG Sbjct 155 RKKYHILVEGEGIPAPIKSFREMKFPQAILKGLKKKGIVHPTPIQIQGIPTILSGRDMIG 214 > hsa:11056 DDX52, HUSSY19, ROK1; DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 (EC:3.6.4.13); K14779 ATP-dependent RNA helicase DDX52/ROK1 [EC:3.6.4.13] Length=599 Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 71/134 (52%), Gaps = 7/134 (5%) Query 45 DELVKRRQEYELKQRQRGAEEAAAAAATAAAEAARASDKKKVKDMEEEPELEGHWSTKKR 104 + L +R++E K+R+ E A+ A + +S + K++D ++ + E ++ K Sbjct 76 ESLTERKREQSKKKRKTMTSEIASQEEGATIQWM-SSVEAKIED--KKVQRESKLTSGKL 132 Query 105 EEMTDRDWRIFREDFEIYLKGGRVPPPIRTWA----EAELPWELIEAVKQANYERPTPIQ 160 E + R +I+++G +P PI T+ E ++ L++ + A ++ PTPIQ Sbjct 133 ENLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQ 192 Query 161 MQAIPIALEMRDLI 174 MQAIP+ L R+L+ Sbjct 193 MQAIPVMLHGRELL 206 > sce:YNL112W DBP2; Dbp2p (EC:3.6.1.-); K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13] Length=546 Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 3/78 (3%) Query 98 HWSTKKREEMTDRDWRIFREDFEIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPT 157 H S + R +D + FR++ E+ + G +P PI T+ EA P ++ VK +++PT Sbjct 81 HESVRDR---SDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPT 137 Query 158 PIQMQAIPIALEMRDLIG 175 IQ Q P+AL RD++G Sbjct 138 GIQCQGWPMALSGRDMVG 155 > mmu:67040 Ddx17, 2610007K22Rik, A430025E01Rik, AI047725, C80929, Gm926, MGC79147, p72; DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 (EC:3.6.4.13); K13178 ATP-dependent RNA helicase DDX17 [EC:3.6.4.13] Length=650 Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 3/96 (3%) Query 83 KKKVKDMEEEPELEGHWSTKKRE--EMTDRDWRIFREDFEIYLKGGRVPP-PIRTWAEAE 139 +KK D+ E P+ E ++ + E +T + R EI ++GG V P P+ + A Sbjct 39 RKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHAN 98 Query 140 LPWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 P +++ + ++ PTPIQ Q P+AL RD++G Sbjct 99 FPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVG 134 > hsa:10521 DDX17, DKFZp761H2016, P72, RH70; DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 (EC:3.6.4.13); K13178 ATP-dependent RNA helicase DDX17 [EC:3.6.4.13] Length=731 Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 3/96 (3%) Query 83 KKKVKDMEEEPELEGHWSTKKRE--EMTDRDWRIFREDFEIYLKGGRVPP-PIRTWAEAE 139 +KK D+ E P+ E ++ + E +T + R EI ++GG V P P+ + A Sbjct 118 RKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHAN 177 Query 140 LPWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 P +++ + ++ PTPIQ Q P+AL RD++G Sbjct 178 FPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVG 213 > bbo:BBOV_II004470 18.m06373; p68-like protein; K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13] Length=529 Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Query 107 MTDRDWRIFREDFEIYLKGGR-VPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIP 165 M+ D R++ EI + GR VP P+ ++ P +++A++ A + PTPIQ+Q P Sbjct 81 MSSADVDRVRKEREITIIAGRDVPKPVVSFEHTSFPDYILKAIRAAGFTAPTPIQVQGWP 140 Query 166 IALEMRDLIG 175 IAL RD+IG Sbjct 141 IALSGRDVIG 150 > xla:446276 ddx52; DEAD (Asp-Glu-Ala-Asp) box polypeptide 52; K14779 ATP-dependent RNA helicase DDX52/ROK1 [EC:3.6.4.13] Length=614 Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 68/131 (51%), Gaps = 4/131 (3%) Query 49 KRRQEYELKQRQRGAEEAAAAAATAAAEAARASDKKKVKDMEEEPELEGHWSTKKREEMT 108 KR+++ ++R +E+ A +A E+ + K + + + + S +K ++ Sbjct 83 KRKKDLGRGVKKRKIQESDAGDVSAGDESILWMSSLEAKLQDGKGKSKKKLSIEKMKQQR 142 Query 109 DRDWRIFREDFEIYLKGGRVPPPIRTWAEAELPWELI----EAVKQANYERPTPIQMQAI 164 FR + +IY++G +P P T+ + E ++++ + VK A + PTPIQMQAI Sbjct 143 LEKINHFRNEHKIYVQGTDIPEPAATFQQLEQEYKILSKIMQNVKDAGFHTPTPIQMQAI 202 Query 165 PIALEMRDLIG 175 PI L R+++ Sbjct 203 PIMLHDREILA 213 > mmu:100048658 Ddx43, OTTMUSG00000019690; DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 (EC:3.6.4.13) Length=646 Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 34/168 (20%) Query 37 QRKANNFYDELVKRRQEYELKQR--------QRGAEEAAAAAAT---------AAAEAAR 79 Q KA D +VK++Q Y QR GA+ + + + T E A Sbjct 120 QTKAKTVIDNVVKKQQNYIPGQRVGIIAFQPTVGADTSTSESVTDDQPLIDWDQIREDAL 179 Query 80 ASDKKKVKDMEEEPELEGHW-----STKKREEMTDRDWRIFREDFEIY---LKGGR---V 128 +KKK D+ P ++ ++ +T ++ +WR +E+F I LK G + Sbjct 180 KWEKKKWADL---PPIKKNFYIESATTSSMSQVQIDNWR--KENFNITCDDLKDGEKRPI 234 Query 129 PPPIRTWAEAELPW-ELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 P PI + +A + E++E +K+A +++PTPIQ QA PI L+ DLIG Sbjct 235 PNPICKFEDAFQSYPEVMENIKRAGFQKPTPIQSQAWPIVLQGIDLIG 282 > tpv:TP02_0316 RNA helicase-1; K13116 ATP-dependent RNA helicase DDX41 [EC:3.6.4.13] Length=598 Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 0/60 (0%) Query 116 REDFEIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 R I + G +VPPPI T+ + +LP +++A++ PT IQMQA+P L RD+IG Sbjct 175 RNALVIDVSGDQVPPPILTFEDMKLPRPILKALRHKKIFEPTKIQMQAMPAVLLGRDVIG 234 > ath:AT3G58570 DEAD box RNA helicase, putative; K11594 ATP-dependent RNA helicase [EC:3.6.4.13] Length=646 Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 0/58 (0%) Query 117 EDFEIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLI 174 ED I G VPPP+ T+AE +L L +++ Y +PTP+Q AIPI RDL+ Sbjct 130 EDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLM 187 > tgo:TGME49_010360 DEAD/DEAH box helicase, putative (EC:5.99.1.3); K13116 ATP-dependent RNA helicase DDX41 [EC:3.6.4.13] Length=657 Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 0/73 (0%) Query 103 KREEMTDRDWRIFREDFEIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQ 162 K EMT + RE F I + G PPP R + + P +++ +++ PT IQMQ Sbjct 178 KYAEMTLAEANEVRERFFIDVSGEDPPPPFRNFKDMRFPQPILKGLQERGISYPTQIQMQ 237 Query 163 AIPIALEMRDLIG 175 IP L+ RD+IG Sbjct 238 GIPAILQGRDIIG 250 > xla:379217 MGC53409; similar to ATP-dependent, RNA helicase; K14779 ATP-dependent RNA helicase DDX52/ROK1 [EC:3.6.4.13] Length=686 Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 4/65 (6%) Query 115 FREDFEIYLKGGRVPPPIRTWAEAELPWEL----IEAVKQANYERPTPIQMQAIPIALEM 170 FR + +IY++G +P P T+ + E +++ ++ VK A + PTPIQMQAIPI L Sbjct 149 FRNEQKIYIQGTDIPEPAATFQQLEQEYKIHSKIMQNVKDAGFHTPTPIQMQAIPIMLHG 208 Query 171 RDLIG 175 R+++ Sbjct 209 REILA 213 > cel:C46F11.4 hypothetical protein; K12835 ATP-dependent RNA helicase DDX42 [EC:3.6.4.13] Length=811 Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%) Query 125 GGRVPP-PIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPIALEMRDLIG 175 GG PP P+ ++A L+EA++++ YE+PTPIQ AIP AL RD++G Sbjct 256 GGLKPPRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLG 307 > hsa:1655 DDX5, DKFZp434E109, DKFZp686J01190, G17P1, HLR1, HUMP68, p68; DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (EC:3.6.4.13); K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13] Length=614 Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 12/129 (9%) Query 59 RQRGAEEAAAAAATAAAEAARASDKK----------KVKDMEEEPELEGHWSTKKRE--E 106 R RG + A + A S KK K +++E P+ E ++ + + Sbjct 8 RDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLAR 67 Query 107 MTDRDWRIFREDFEIYLKGGRVPPPIRTWAEAELPWELIEAVKQANYERPTPIQMQAIPI 166 T ++ +R EI ++G P P+ + EA P +++ + + N+ PT IQ Q P+ Sbjct 68 RTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPV 127 Query 167 ALEMRDLIG 175 AL D++G Sbjct 128 ALSGLDMVG 136 Lambda K H 0.315 0.132 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 4535951560 Database: egene_temp_file_orthology_annotation_similarity_blast_database_966 Posted date: Sep 16, 2011 8:45 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40