bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_966 164,496 sequences; 82,071,388 total letters Query= Eace_2503_orf1 Length=101 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_071440 hypothetical protein ; K14015 nuclear protei... 139 3e-33 bbo:BBOV_II006090 18.m06505; NPL4 family protein; K14015 nucle... 120 1e-27 pfa:PFE0380c Nuclear pore associated protein (NLP4), putative;... 116 1e-26 cpv:cgd7_1970 nuclear pore associated protein (NLP4) with N-te... 115 3e-26 tpv:TP02_0563 hypothetical protein; K14015 nuclear protein loc... 113 2e-25 sce:YBR170C NPL4, HRD4; Endoplasmic reticulum and nuclear memb... 56.6 2e-08 mmu:217365 Nploc4, AK129375, KIAA1499, Npl4, mKIAA1499; nuclea... 56.6 2e-08 xla:380119 nploc4, MGC68928, npl4; nuclear protein localizatio... 56.2 2e-08 hsa:55666 NPLOC4, FLJ20657, FLJ23742, KIAA1499, NPL4; nuclear ... 56.2 2e-08 xla:494816 hypothetical LOC494816 54.7 7e-08 dre:327447 nploc4, npl4, wu:fi11f09, zgc:55988; nuclear protei... 54.7 8e-08 cel:F59E12.4 npl-4.1; NPL (yeast Nuclear Protein Localization)... 47.0 2e-05 cel:F59E12.5 npl-4.2; NPL (yeast Nuclear Protein Localization)... 46.6 2e-05 ath:AT3G63000 NPL41; NPL41 (NPL4-LIKE PROTEIN 1); K14015 nucle... 34.7 0.084 ath:AT2G47970 NPL4 family protein 32.7 0.30 pfa:PFA_0100c Plasmodium exported protein (PHISTa), unknown fu... 30.8 0.99 dre:559010 exoc5, zgc:175220; exocyst complex component 5 29.3 cel:R09E10.9 hypothetical protein 28.9 4.0 tpv:TP01_1211 hypothetical protein 28.9 4.0 ath:AT1G09840 ATSK41; ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41); ... 28.9 4.1 ath:AT4G23510 disease resistance protein (TIR class), putative 27.7 9.7 > tgo:TGME49_071440 hypothetical protein ; K14015 nuclear protein localization protein 4 homolog Length=502 Score = 139 bits (349), Expect = 3e-33, Method: Composition-based stats. Identities = 59/92 (64%), Positives = 72/92 (78%), Gaps = 0/92 (0%) Query 1 PLLKSYKPTKLQAGQMNRMPQTLSLKHQVYRRVDHLELMNVREARDFVSFWRDSLCMQQQ 60 P SYKP +L+AG+MN++P T++LKHQVYR VDHLE+MNV + ++FV FW++ L M QQ Sbjct 161 PGCTSYKPRRLEAGRMNKIPTTVTLKHQVYRHVDHLEMMNVEDVKNFVRFWQEDLQMLQQ 220 Query 61 RFGLMFGYYTEDNHYNKGSRPVCEVIYEPPQE 92 RFG MFGYY ED HY G R VCE IYEPPQE Sbjct 221 RFGYMFGYYVEDPHYPDGIRAVCEAIYEPPQE 252 > bbo:BBOV_II006090 18.m06505; NPL4 family protein; K14015 nuclear protein localization protein 4 homolog Length=480 Score = 120 bits (301), Expect = 1e-27, Method: Composition-based stats. Identities = 48/91 (52%), Positives = 69/91 (75%), Gaps = 0/91 (0%) Query 1 PLLKSYKPTKLQAGQMNRMPQTLSLKHQVYRRVDHLELMNVREARDFVSFWRDSLCMQQQ 60 PL +SYKP ++ G+MN++P ++++KHQ YR VDH+ELMNV++ +F ++W + L M +Q Sbjct 147 PLRQSYKPILIERGKMNKLPSSVTVKHQPYRHVDHIELMNVQDIHNFANYWMNDLEMAEQ 206 Query 61 RFGLMFGYYTEDNHYNKGSRPVCEVIYEPPQ 91 R G ++GYY ED+HY G R VCE IYEPPQ Sbjct 207 RAGWLYGYYVEDSHYPLGIRAVCEGIYEPPQ 237 > pfa:PFE0380c Nuclear pore associated protein (NLP4), putative; K14015 nuclear protein localization protein 4 homolog Length=531 Score = 116 bits (291), Expect = 1e-26, Method: Composition-based stats. Identities = 53/91 (58%), Positives = 65/91 (71%), Gaps = 0/91 (0%) Query 1 PLLKSYKPTKLQAGQMNRMPQTLSLKHQVYRRVDHLELMNVREARDFVSFWRDSLCMQQQ 60 PL YK L G++N++P +++LKHQ YR VDHLELMNV E R+FV++W M +Q Sbjct 196 PLNLEYKSVYLCKGRVNKIPLSITLKHQEYRHVDHLELMNVEEVRNFVNYWYTYNNMLEQ 255 Query 61 RFGLMFGYYTEDNHYNKGSRPVCEVIYEPPQ 91 R G M+GYY EDNHYN G R VCE IYEPPQ Sbjct 256 RIGWMYGYYREDNHYNLGIRAVCECIYEPPQ 286 > cpv:cgd7_1970 nuclear pore associated protein (NLP4) with N-terminal ubiquitin domain ; K14015 nuclear protein localization protein 4 homolog Length=491 Score = 115 bits (289), Expect = 3e-26, Method: Composition-based stats. Identities = 52/101 (51%), Positives = 68/101 (67%), Gaps = 0/101 (0%) Query 1 PLLKSYKPTKLQAGQMNRMPQTLSLKHQVYRRVDHLELMNVREARDFVSFWRDSLCMQQQ 60 PL +SYK + G MN++P +++L+HQ YR VDHLE+MN+ EA FV +WR L M +Q Sbjct 154 PLKQSYKSFFISKGVMNKIPPSVTLRHQAYRHVDHLEMMNLSEAMQFVDYWRSKLGMMKQ 213 Query 61 RFGLMFGYYTEDNHYNKGSRPVCEVIYEPPQEGVGEGWRLI 101 R G M+GYY ED+ Y G R V E IYEPPQ+ E +LI Sbjct 214 RVGWMYGYYREDSTYPMGIRAVMEAIYEPPQDEKAEPGKLI 254 > tpv:TP02_0563 hypothetical protein; K14015 nuclear protein localization protein 4 homolog Length=531 Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 50/95 (52%), Positives = 67/95 (70%), Gaps = 4/95 (4%) Query 1 PLLKSYKPTKLQAGQMNR----MPQTLSLKHQVYRRVDHLELMNVREARDFVSFWRDSLC 56 PL+ S+ P K++ G +N+ +P++++++HQ YR VDHLE+MNV E R F +FW L Sbjct 145 PLMNSFVPIKIKRGAINKVSVTLPKSITIRHQKYRHVDHLEMMNVDEVRGFANFWLSELQ 204 Query 57 MQQQRFGLMFGYYTEDNHYNKGSRPVCEVIYEPPQ 91 M QR G M+GYYTED+HY G R VCE IYEPPQ Sbjct 205 MSLQRIGWMYGYYTEDHHYPYGIRAVCEAIYEPPQ 239 > sce:YBR170C NPL4, HRD4; Endoplasmic reticulum and nuclear membrane protein, forms a complex with Cdc48p and Ufd1p that recognizes ubiquitinated proteins in the endoplasmic reticulum and delivers them to the proteasome for degradation; K14015 nuclear protein localization protein 4 homolog Length=580 Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 3/81 (3%) Query 20 PQTLSLKHQVYRRVDHLELMNVREARDFVSFWRDSLCMQQQRFGLMFGYYTEDNHYNKGS 79 P ++L+ Q +R VDH+E +F+ WR + QRFG M+G Y++ ++ G Sbjct 221 PSAITLQQQEFRMVDHVEFQKSEIINEFIQAWRYT---GMQRFGYMYGSYSKYDNTPLGI 277 Query 80 RPVCEVIYEPPQEGVGEGWRL 100 + V E IYEPPQ +G + Sbjct 278 KAVVEAIYEPPQHDEQDGLTM 298 > mmu:217365 Nploc4, AK129375, KIAA1499, Npl4, mKIAA1499; nuclear protein localization 4 homolog (S. cerevisiae); K14015 nuclear protein localization protein 4 homolog Length=608 Score = 56.6 bits (135), Expect = 2e-08, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 3/82 (3%) Query 20 PQTLSLKHQVYRRVDHLELMNVREARDFVSFWRDSLCMQQQRFGLMFGYYTEDNHYNKGS 79 P ++L Q YR VD++ N A F+ FWR + Q FG ++G YTE G Sbjct 210 PSAITLNRQKYRHVDNIMFENHTVADRFLDFWRKT---GNQHFGYLYGRYTEHKDIPLGI 266 Query 80 RPVCEVIYEPPQEGVGEGWRLI 101 R IYEPPQ G L+ Sbjct 267 RAEVAAIYEPPQIGTQNSLELL 288 > xla:380119 nploc4, MGC68928, npl4; nuclear protein localization 4 homolog; K14015 nuclear protein localization protein 4 homolog Length=610 Score = 56.2 bits (134), Expect = 2e-08, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 3/82 (3%) Query 20 PQTLSLKHQVYRRVDHLELMNVREARDFVSFWRDSLCMQQQRFGLMFGYYTEDNHYNKGS 79 P ++L Q YR VD++ N A F+ FWR + QR G ++G YTE G Sbjct 212 PSAITLNRQKYRHVDNIMFENHTIADRFLDFWRKT---GNQRIGYLYGRYTEHKDIPLGL 268 Query 80 RPVCEVIYEPPQEGVGEGWRLI 101 R IYEPPQ G +L+ Sbjct 269 RAEVAAIYEPPQIGTQNSLQLL 290 > hsa:55666 NPLOC4, FLJ20657, FLJ23742, KIAA1499, NPL4; nuclear protein localization 4 homolog (S. cerevisiae); K14015 nuclear protein localization protein 4 homolog Length=608 Score = 56.2 bits (134), Expect = 2e-08, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 3/82 (3%) Query 20 PQTLSLKHQVYRRVDHLELMNVREARDFVSFWRDSLCMQQQRFGLMFGYYTEDNHYNKGS 79 P ++L Q YR VD++ N A F+ FWR + Q FG ++G YTE G Sbjct 210 PSAITLNRQKYRHVDNIMFENHTVADRFLDFWRKT---GNQHFGYLYGRYTEHKDIPLGI 266 Query 80 RPVCEVIYEPPQEGVGEGWRLI 101 R IYEPPQ G L+ Sbjct 267 RAEVAAIYEPPQIGTQNSLELL 288 > xla:494816 hypothetical LOC494816 Length=610 Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 3/82 (3%) Query 20 PQTLSLKHQVYRRVDHLELMNVREARDFVSFWRDSLCMQQQRFGLMFGYYTEDNHYNKGS 79 P ++L Q YR VD++ N A F+ FWR + QR G ++G YTE G Sbjct 212 PSAITLNRQKYRHVDNIMFENHTIADRFLDFWRKT---GNQRIGYLYGRYTEHKDIPLGL 268 Query 80 RPVCEVIYEPPQEGVGEGWRLI 101 R IYEPPQ G +L+ Sbjct 269 RAEVAAIYEPPQIGTQNSLQLL 290 > dre:327447 nploc4, npl4, wu:fi11f09, zgc:55988; nuclear protein localization 4 homolog (S. cerevisiae); K14015 nuclear protein localization protein 4 homolog Length=624 Score = 54.7 bits (130), Expect = 8e-08, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 3/82 (3%) Query 20 PQTLSLKHQVYRRVDHLELMNVREARDFVSFWRDSLCMQQQRFGLMFGYYTEDNHYNKGS 79 P ++L Q YR VD++ N A F+ FWR + QR G ++G YTE G Sbjct 226 PSAITLNRQKYRHVDNIMFENHTIADRFLDFWRKT---GNQRMGYLYGRYTEHKDIPLGI 282 Query 80 RPVCEVIYEPPQEGVGEGWRLI 101 R IYEPPQ LI Sbjct 283 RAEVAAIYEPPQIATQNSLELI 304 > cel:F59E12.4 npl-4.1; NPL (yeast Nuclear Protein Localization) homolog family member (npl-4.1) Length=529 Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 3/82 (3%) Query 20 PQTLSLKHQVYRRVDHLELMNVREARDFVSFWRDSLCMQQQRFGLMFGYYTEDNHYNKGS 79 PQ ++L Q +R VD++++ N F+ +WR S QR G + G Y G Sbjct 113 PQVVTLNRQKFRHVDNIQIENQELVNQFLDYWRLS---GHQRVGFLIGQYQPHLEVPLGI 169 Query 80 RPVCEVIYEPPQEGVGEGWRLI 101 + IYEPPQ +G + Sbjct 170 KATVAAIYEPPQHCREDGIEFL 191 > cel:F59E12.5 npl-4.2; NPL (yeast Nuclear Protein Localization) homolog family member (npl-4.2); K14015 nuclear protein localization protein 4 homolog Length=529 Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 3/82 (3%) Query 20 PQTLSLKHQVYRRVDHLELMNVREARDFVSFWRDSLCMQQQRFGLMFGYYTEDNHYNKGS 79 PQ ++L Q +R VD++++ N F+ +WR S QR G + G Y G Sbjct 113 PQVVTLNRQKFRHVDNIQIENQELVNQFLDYWRLS---GHQRVGFLIGQYQPHLEVPLGI 169 Query 80 RPVCEVIYEPPQEGVGEGWRLI 101 + IYEPPQ +G + Sbjct 170 KATVAAIYEPPQHCREDGIEFL 191 > ath:AT3G63000 NPL41; NPL41 (NPL4-LIKE PROTEIN 1); K14015 nuclear protein localization protein 4 homolog Length=413 Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 6/58 (10%) Query 44 ARDFVSFWRDSLCMQQQRFGLMFGYYTEDNHYNKGSRPVCEVIYEPPQEGVGEGWRLI 101 A F F +SL +R G M+G +ED IYEPPQ+G+ + L+ Sbjct 139 ANAFQHFVNESLAFAVKRGGFMYGNVSEDGQVE------VNFIYEPPQQGMEDNLILM 190 > ath:AT2G47970 NPL4 family protein Length=413 Score = 32.7 bits (73), Expect = 0.30, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 6/50 (12%) Query 44 ARDFVSFWRDSLCMQQQRFGLMFGYYTEDNHYNKGSRPVCEVIYEPPQEG 93 A F + +SL +R G M+G TE+ + IYEPPQ+G Sbjct 139 ANAFQHYVNESLAFAVKRGGFMYGTVTEEGQVE------VDFIYEPPQQG 182 > pfa:PFA_0100c Plasmodium exported protein (PHISTa), unknown function Length=187 Score = 30.8 bits (68), Expect = 0.99, Method: Compositional matrix adjust. Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 13/52 (25%) Query 45 RDFVSFWRDSLCMQQQRFGLM---FGYYTED----------NHYNKGSRPVC 83 ++F S W++ LC+ ++ F + +Y ED NH+ RPVC Sbjct 63 KNFYSIWKNVLCITKEEFDDISKELSFYIEDYLPKYEYPCYNHFRCKDRPVC 114 > dre:559010 exoc5, zgc:175220; exocyst complex component 5 Length=708 Score = 29.3 bits (64), Expect = 3.6, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 12/105 (11%) Query 4 KSYKPTKLQAGQMNRMPQTLSLKHQVYRRVDHLELMNVREARDFVSFWRDSLCMQQQRFG 63 +++ P KL +N + + L ++ R+V+ LE REA++F +D Q+ Sbjct 35 EAFDPKKLLEEFVNHIEELKLLDERIQRKVEKLEQQCHREAKEFAHKVQD----LQRSNQ 90 Query 64 LMFGYYTE-DNHYNKGSRPVC------EVIYEPPQEGVGEGWRLI 101 + F ++ E D H + + VC E + P Q V E RL+ Sbjct 91 VAFQHFQELDEHISYVATKVCHLGDQLEGVNTPRQRAV-EAQRLM 134 > cel:R09E10.9 hypothetical protein Length=443 Score = 28.9 bits (63), Expect = 4.0, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query 51 WRDSLCMQQQRFGLMFGYYTEDNHYN--KGSRPVCEVIYEPPQEGVGEGWRLI 101 ++D +C + R L GY + H N KG++P+ + P ++ V + WR++ Sbjct 85 YKDVMCNDKTRVILKDGYPGDYIHANYLKGTKPMLILTQGPLKDSVMDIWRMV 137 > tpv:TP01_1211 hypothetical protein Length=247 Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust. Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 0/25 (0%) Query 22 TLSLKHQVYRRVDHLELMNVREARD 46 TL L +QVY VD+LE M +++ RD Sbjct 213 TLRLANQVYPEVDNLESMQIKKIRD 237 > ath:AT1G09840 ATSK41; ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41); ATP binding / protein kinase/ protein serine/threonine kinase Length=421 Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 0/35 (0%) Query 4 KSYKPTKLQAGQMNRMPQTLSLKHQVYRRVDHLEL 38 K YK +LQ QM P ++LKH + R D+ E+ Sbjct 118 KRYKNRELQIMQMLDHPNAVALKHSFFSRTDNEEV 152 > ath:AT4G23510 disease resistance protein (TIR class), putative Length=635 Score = 27.7 bits (60), Expect = 9.7, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 0/54 (0%) Query 23 LSLKHQVYRRVDHLELMNVREARDFVSFWRDSLCMQQQRFGLMFGYYTEDNHYN 76 L + V ++VD + ++ E D + WR +L R G + + +++ N Sbjct 122 LKTEEDVRKKVDRSNIRSILETEDMIWGWRQALVSVGGRMGFSYNHKCDNDFVN 175 Lambda K H 0.323 0.138 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2036602604 Database: egene_temp_file_orthology_annotation_similarity_blast_database_966 Posted date: Sep 16, 2011 8:45 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40