bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_966 164,496 sequences; 82,071,388 total letters Query= Eace_2001_orf2 Length=137 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_112520 tRNA delta(2)-isopentenylpyrophosphate trans... 107 1e-23 tpv:TP01_0445 tRNA delta(2)-isopentenylpyrophosphate transfera... 80.9 1e-15 ath:AT5G20040 ATIPT9; ATIPT9; ATP binding / tRNA isopentenyltr... 75.9 3e-14 cpv:cgd6_2540 tRNA delta(2)-isopentenylpyrophosphate transferase 71.6 7e-13 ath:AT3G63110 ATIPT3; ATIPT3 (ARABIDOPSIS THALIANA ISOPENTENYL... 68.6 5e-12 ath:AT5G19040 IPT5; IPT5; ATP binding / tRNA isopentenyltransf... 67.4 1e-11 ath:AT1G68460 ATIPT1; ATIPT1 (isopentenyltransferase 1); adeny... 66.6 2e-11 dre:553523 trit1, si:ch211-194e15.1; tRNA isopentenyltransfera... 66.2 3e-11 ath:AT3G23630 ATIPT7; ATIPT7; ATP binding / tRNA isopentenyltr... 65.5 5e-11 cel:ZC395.6 gro-1; abnormal GROwth rate family member (gro-1);... 64.7 8e-11 pfa:PFL0380c tRNA delta(2)-isopentenylpyrophosphate transferas... 64.3 9e-11 eco:b4171 miaA, ECK4167, JW4129, trpX; delta(2)-isopentenylpyr... 63.5 2e-10 sce:YOR274W MOD5; Delta 2-isopentenyl pyrophosphate:tRNA isope... 63.2 2e-10 ath:AT4G24650 ATIPT4; ATIPT4; adenylate dimethylallyltransfera... 63.2 2e-10 ath:AT1G25410 ATIPT6; ATIPT6; ATP binding / adenylate dimethyl... 62.4 4e-10 ath:AT2G27760 ATIPT2; ATIPT2 (TRNA ISOPENTENYLTRANSFERASE 2); ... 62.0 5e-10 mmu:66966 Trit1, 2310075G14Rik, AI314189, AI314635, AV099619, ... 61.6 8e-10 hsa:54802 TRIT1, FLJ20061, IPT, MGC149242, MGC149243, MOD5; tR... 60.8 1e-09 ath:AT3G19160 ATIPT8; ATIPT8 (ATP/ADP ISOPENTENYLTRANSFERASES)... 55.5 4e-08 dre:100332840 tRNA delta(2)-isopentenylpyrophosphate transfera... 52.0 5e-07 bbo:BBOV_IV006320 23.m06027; hypothetical protein; K00791 tRNA... 50.4 1e-06 ath:AT4G16900 ATP binding / protein binding / transmembrane re... 31.6 0.87 cel:Y61A9LA.10 hypothetical protein; K14569 ribosome biogenesi... 31.2 1.1 ath:AT3G04340 emb2458 (embryo defective 2458); ATP binding / A... 30.8 1.3 hsa:57674 RNF213, C17orf27, DKFZp762N1115, FLJ13051, KIAA1554,... 30.8 1.3 eco:b3931 hslU, clpY, ECK3923, htpI, JW3902; molecular chapero... 30.0 2.3 eco:b0794 ybhF, ECK0783, JW5104; fused predicted transporter s... 30.0 2.4 mmu:240255 Ythdc2, 3010002F02Rik, BC037178; YTH domain contain... 29.6 2.7 ath:AT1G15310 ATHSRP54A (ARABIDOPSIS THALIANA SIGNAL RECOGNITI... 29.6 2.7 hsa:64848 YTHDC2; YTH domain containing 2 (EC:3.6.4.13) 29.6 2.8 cpv:cgd7_3430 protein kinase 29.6 2.8 tgo:TGME49_057740 UMP-CMP kinase, putative (EC:2.7.4.3); K1380... 29.3 3.4 ath:AT1G05910 cell division cycle protein 48-related / CDC48-r... 29.3 3.5 ath:AT2G45700 sterile alpha motif (SAM) domain-containing protein 29.3 3.6 ath:AT1G79050 DNA repair protein recA 29.3 3.7 xla:398492 smc5, SMC-5; structural maintenance of chromosomes 5 29.3 sce:YPL217C BMS1; Bms1p; K14569 ribosome biogenesis protein BMS1 29.3 4.1 pfa:PF11_0175 heat shock protein 101, putative 28.9 4.3 ath:AT5G19410 ABC transporter family protein 28.9 5.5 mmu:381917 Dnahc3, BC051401, Dnah3; dynein, axonemal, heavy ch... 28.9 5.6 mmu:622554 1700123I01Rik; RIKEN cDNA 1700123I01 gene 28.5 5.7 cpv:cgd4_1480 BMS1 like GTpase involved in ribosome biogenesis... 28.5 6.0 ath:AT5G52860 ABC transporter family protein 28.5 6.1 hsa:221264 AKD1, AKD2, C6orf199, C6orf224, FLJ16163, FLJ25791,... 28.5 6.7 dre:558115 zgc:153738 28.5 7.2 dre:393941 psmc2, MGC63995, zgc:63995; proteasome (prosome, ma... 28.1 7.6 xla:399327 psmc2, xMSS1; proteasome (prosome, macropain) 26S s... 28.1 7.6 tgo:TGME49_088700 chromosome segregation protein smc1, putativ... 28.1 7.7 cel:C52E4.4 rpt-1; proteasome Regulatory Particle, ATPase-like... 28.1 7.8 > tgo:TGME49_112520 tRNA delta(2)-isopentenylpyrophosphate transferase, putative (EC:2.5.1.8); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Length=741 Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 48/67 (71%), Positives = 58/67 (86%), Gaps = 0/67 (0%) Query 68 VVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASAAEREAVP 127 VVFI+GPTGVGK+RL +++ L L++ G AEIVSADSMQVYKGCDIATAKAS E++ VP Sbjct 177 VVFILGPTGVGKTRLSVEVALALQRRGQAAEIVSADSMQVYKGCDIATAKASVEEQKQVP 236 Query 128 HHLLDVC 134 HHLLD+C Sbjct 237 HHLLDIC 243 > tpv:TP01_0445 tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Length=374 Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 0/70 (0%) Query 67 KVVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASAAEREAV 126 K+V I+GPT GK++ +D C +L+ IN+EI+++DSMQVYKG +I TAK S E + Sbjct 35 KLVIIVGPTASGKTKFSVDFCKKLKDFNINSEIINSDSMQVYKGFNIGTAKPSEDELSLI 94 Query 127 PHHLLDVCTP 136 PHHLL+ P Sbjct 95 PHHLLNFVDP 104 > ath:AT5G20040 ATIPT9; ATIPT9; ATP binding / tRNA isopentenyltransferase (EC:2.5.1.27); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Length=459 Score = 75.9 bits (185), Expect = 3e-14, Method: Composition-based stats. Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 9/104 (8%) Query 37 LRFPTFLGKFPFLASNTPAMAP----EECAETPPKVVFIIGPTGVGKSRLGLDICLELRK 92 L+ P+ + + F A+ T P ++ KV+ I GPTG GKSRL +++ L Sbjct 17 LQPPSLVLRRRFCAATTACSVPLNGNKKKKSEKEKVIVISGPTGAGKSRLAMELAKRL-- 74 Query 93 NGINAEIVSADSMQVYKGCDIATAKASAAEREAVPHHLLDVCTP 136 N EI+SADS+QVYKG D+ +AK S ++R+ VPHHL+D+ P Sbjct 75 ---NGEIISADSVQVYKGLDVGSAKPSDSDRKVVPHHLIDILHP 115 > cpv:cgd6_2540 tRNA delta(2)-isopentenylpyrophosphate transferase Length=361 Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 0/56 (0%) Query 78 GKSRLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASAAEREAVPHHLLDV 133 GK+RL +DI L K G +EI++ DSMQ+YKG DI TAK S R +PHHLLDV Sbjct 5 GKTRLSIDIWKYLDKKGFKSEIINCDSMQLYKGFDIGTAKVSKEIRNRIPHHLLDV 60 > ath:AT3G63110 ATIPT3; ATIPT3 (ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 3); ATP binding / tRNA isopentenyltransferase/ transferase, transferring alkyl or aryl (other than methyl) groups; K10760 adenylate isopentenyltransferase (cytokinin synthase) Length=336 Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 5/71 (7%) Query 67 KVVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASAAEREAV 126 KVV I+G TG GKSRL +DI R AEI+++D +QV++G DI T K ++ E V Sbjct 42 KVVVIMGATGTGKSRLSVDIATRFR-----AEIINSDKIQVHQGLDIVTNKITSEESCGV 96 Query 127 PHHLLDVCTPQ 137 PHHLL V P+ Sbjct 97 PHHLLGVLPPE 107 > ath:AT5G19040 IPT5; IPT5; ATP binding / tRNA isopentenyltransferase/ transferase, transferring alkyl or aryl (other than methyl) groups; K10760 adenylate isopentenyltransferase (cytokinin synthase) Length=330 Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 5/65 (7%) Query 67 KVVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASAAEREAV 126 KVVF++G TG GKSRL +D+ AEIV++D +QVYKG DI T K + E V Sbjct 34 KVVFVMGATGTGKSRLAIDLATRF-----PAEIVNSDKIQVYKGLDIVTNKVTPEESLGV 88 Query 127 PHHLL 131 PHHLL Sbjct 89 PHHLL 93 > ath:AT1G68460 ATIPT1; ATIPT1 (isopentenyltransferase 1); adenylate dimethylallyltransferase (EC:2.5.1.27); K10760 adenylate isopentenyltransferase (cytokinin synthase) Length=357 Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 5/82 (6%) Query 56 MAPEECAETPPKVVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVYKGCDIAT 115 M KVV I+G TG GKSRL +D+ +EI+++D +QVY+G +I T Sbjct 55 MEQSRSRNRKDKVVVILGATGAGKSRLSVDLATRF-----PSEIINSDKIQVYEGLEITT 109 Query 116 AKASAAEREAVPHHLLDVCTPQ 137 + + +R VPHHLL V P+ Sbjct 110 NQITLQDRRGVPHHLLGVINPE 131 > dre:553523 trit1, si:ch211-194e15.1; tRNA isopentenyltransferase 1 (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Length=447 Score = 66.2 bits (160), Expect = 3e-11, Method: Composition-based stats. Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 5/71 (7%) Query 66 PKVVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASAAEREA 125 P +V I+G TG GKS+L ++I L N EI+SADSMQVYKG DI T K + E+ Sbjct 14 PSLVVILGATGTGKSKLAIEIGKRL-----NGEIISADSMQVYKGLDIITNKVTEEEQAQ 68 Query 126 VPHHLLDVCTP 136 HH++ P Sbjct 69 CHHHMISFVDP 79 > ath:AT3G23630 ATIPT7; ATIPT7; ATP binding / tRNA isopentenyltransferase/ transferase, transferring alkyl or aryl (other than methyl) groups; K10760 adenylate isopentenyltransferase (cytokinin synthase) Length=329 Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 5/69 (7%) Query 65 PPKVVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASAAERE 124 KV+F++G TG GKSRL +D+ + EI+++D +Q+YKG D+ T K + E Sbjct 33 KEKVIFVMGATGSGKSRLAIDLATRFQ-----GEIINSDKIQLYKGLDVLTNKVTPKECR 87 Query 125 AVPHHLLDV 133 VPHHLL V Sbjct 88 GVPHHLLGV 96 > cel:ZC395.6 gro-1; abnormal GROwth rate family member (gro-1); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Length=430 Score = 64.7 bits (156), Expect = 8e-11, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 5/69 (7%) Query 68 VVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASAAEREAVP 127 ++F+IG TG GKS LG+ I +K G E++S DSMQ YKG DIAT K + E E + Sbjct 20 IIFVIGCTGTGKSDLGVAIA---KKYG--GEVISVDSMQFYKGLDIATNKITEEESEGIQ 74 Query 128 HHLLDVCTP 136 HH++ P Sbjct 75 HHMMSFLNP 83 > pfa:PFL0380c tRNA delta(2)-isopentenylpyrophosphate transferase, putative (EC:2.5.1.8); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Length=601 Score = 64.3 bits (155), Expect = 9e-11, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 0/64 (0%) Query 73 GPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASAAEREAVPHHLLD 132 G T GK++ +D+ +L K I +EI+SADSMQVY+ ++ AK E + V HHLLD Sbjct 236 GVTCSGKTKFSIDLSEQLMKYKIKSEIISADSMQVYQNFNVGIAKVEEEEMKDVKHHLLD 295 Query 133 VCTP 136 VC P Sbjct 296 VCHP 299 > eco:b4171 miaA, ECK4167, JW4129, trpX; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Length=316 Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 5/71 (7%) Query 66 PKVVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASAAEREA 125 PK +F++GPT GK+ L +ELRK + E++S DS +YKG DI TAK +A E A Sbjct 10 PKAIFLMGPTASGKTAL----AIELRKI-LPVELISVDSALIYKGMDIGTAKPNAEELLA 64 Query 126 VPHHLLDVCTP 136 PH LLD+ P Sbjct 65 APHRLLDIRDP 75 > sce:YOR274W MOD5; Delta 2-isopentenyl pyrophosphate:tRNA isopentenyl transferase, required for biosynthesis of the modified base isopentenyladenosine in mitochondrial and cytoplasmic tRNAs; gene is nuclear and encodes two isozymic forms (EC:2.5.1.8); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Length=428 Score = 63.2 bits (152), Expect = 2e-10, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 5/72 (6%) Query 61 CAETPPKVVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASA 120 C KV+ I G TGVGKS+L + + + N E++++DSMQVYK I T K Sbjct 9 CLNMSKKVIVIAGTTGVGKSQLSIQLAQKF-----NGEVINSDSMQVYKDIPIITNKHPL 63 Query 121 AEREAVPHHLLD 132 ERE +PHH+++ Sbjct 64 QEREGIPHHVMN 75 > ath:AT4G24650 ATIPT4; ATIPT4; adenylate dimethylallyltransferase; K10760 adenylate isopentenyltransferase (cytokinin synthase) Length=318 Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 5/71 (7%) Query 67 KVVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASAAEREAV 126 K+V I+G TG GKS L +D+ L + AEI+++D MQ Y G I T +++ +R V Sbjct 6 KMVVIMGATGSGKSSLSVDLALHFK-----AEIINSDKMQFYDGLKITTNQSTIEDRRGV 60 Query 127 PHHLLDVCTPQ 137 PHHLL P+ Sbjct 61 PHHLLGELNPE 71 > ath:AT1G25410 ATIPT6; ATIPT6; ATP binding / adenylate dimethylallyltransferase/ tRNA isopentenyltransferase; K10760 adenylate isopentenyltransferase (cytokinin synthase) Length=342 Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 50/104 (48%), Gaps = 4/104 (3%) Query 34 SNSLRFPTFLGKFPFLASNTPAMAPEECAETPPKVVFIIGPTGVGKSRLGLDICLELRKN 93 S+S PT KF T M KVV I G TG GKSRL +D+ Sbjct 13 SHSSLLPTVTTKFGSPRLVTTCMGHAGRKNIKDKVVLITGTTGTGKSRLSVDLATRF--- 69 Query 94 GINAEIVSADSMQVYKGCDIATAKASAAEREAVPHHLLDVCTPQ 137 AEI+++D MQ+YKG +I T E+ VPHHLL PQ Sbjct 70 -FPAEIINSDKMQIYKGFEIVTNLIPLHEQGGVPHHLLGQFHPQ 112 > ath:AT2G27760 ATIPT2; ATIPT2 (TRNA ISOPENTENYLTRANSFERASE 2); adenylate dimethylallyltransferase/ tRNA isopentenyltransferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Length=466 Score = 62.0 bits (149), Expect = 5e-10, Method: Composition-based stats. Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 5/61 (8%) Query 71 IIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASAAEREAVPHHL 130 I+GPTG GKS+L +D+ + EI++AD+MQ+Y G D+ T K + E++ VPHHL Sbjct 25 IMGPTGSGKSKLAVDLA-----SHFPVEIINADAMQIYSGLDVLTNKVTVDEQKGVPHHL 79 Query 131 L 131 L Sbjct 80 L 80 > mmu:66966 Trit1, 2310075G14Rik, AI314189, AI314635, AV099619, IPT, MOD5; tRNA isopentenyltransferase 1 (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Length=467 Score = 61.6 bits (148), Expect = 8e-10, Method: Composition-based stats. Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 5/69 (7%) Query 68 VVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASAAEREAVP 127 +V I+G TG GKS L L + L EIVSADSMQVY+G DI T K SA E++ Sbjct 25 LVVILGATGTGKSTLALQLGQRL-----GGEIVSADSMQVYEGLDIITNKVSAQEQKMCQ 79 Query 128 HHLLDVCTP 136 HH++ P Sbjct 80 HHMISFVDP 88 > hsa:54802 TRIT1, FLJ20061, IPT, MGC149242, MGC149243, MOD5; tRNA isopentenyltransferase 1 (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Length=467 Score = 60.8 bits (146), Expect = 1e-09, Method: Composition-based stats. Identities = 33/69 (47%), Positives = 40/69 (57%), Gaps = 5/69 (7%) Query 68 VVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASAAEREAVP 127 +V I+G TG GKS L L + L EIVSADSMQVY+G DI T K SA E+ Sbjct 25 LVVILGATGTGKSTLALQLGQRL-----GGEIVSADSMQVYEGLDIITNKVSAQEQRICR 79 Query 128 HHLLDVCTP 136 HH++ P Sbjct 80 HHMISFVDP 88 > ath:AT3G19160 ATIPT8; ATIPT8 (ATP/ADP ISOPENTENYLTRANSFERASES); adenylate dimethylallyltransferase (EC:2.5.1.27); K10760 adenylate isopentenyltransferase (cytokinin synthase) Length=330 Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 5/65 (7%) Query 67 KVVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASAAEREAV 126 KVV I+G TG GKS L +D+ + EIV++D +Q Y G + T + S ER V Sbjct 44 KVVVIMGATGSGKSCLSIDLATRF-----SGEIVNSDKIQFYDGLKVTTNQMSILERCGV 98 Query 127 PHHLL 131 PHHLL Sbjct 99 PHHLL 103 > dre:100332840 tRNA delta(2)-isopentenylpyrophosphate transferase, putative-like Length=259 Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 5/64 (7%) Query 67 KVVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASAAEREAV 126 + + I GPT GKS L L L + NG+ +++ADSMQVY + TA+ S E E + Sbjct 10 EAILITGPTAGGKSALAL--SLARQHNGV---VINADSMQVYDTLRVLTARPSEEEMEEI 64 Query 127 PHHL 130 PHHL Sbjct 65 PHHL 68 > bbo:BBOV_IV006320 23.m06027; hypothetical protein; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Length=185 Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 33/45 (73%), Gaps = 0/45 (0%) Query 63 ETPPKVVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQV 107 + PK++ ++GPT GK+ +++ L+L+ + I AEI++ADSMQ+ Sbjct 22 DVKPKIIVVLGPTATGKTEASIELALKLKTHNITAEIINADSMQI 66 > ath:AT4G16900 ATP binding / protein binding / transmembrane receptor Length=1040 Score = 31.6 bits (70), Expect = 0.87, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 7/53 (13%) Query 32 SPSNSLRFPTFLGKFPFLASNTPAMAPEECAETP-PKVVFIIGPTGVGKSRLG 83 SPSNS G F + ++ AM C E+ ++V I GP+G+GKS +G Sbjct 176 SPSNSF------GDFVGIEAHLEAMNSILCLESKEARMVGIWGPSGIGKSTIG 222 > cel:Y61A9LA.10 hypothetical protein; K14569 ribosome biogenesis protein BMS1 Length=1055 Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats. Identities = 12/20 (60%), Positives = 16/20 (80%), Gaps = 0/20 (0%) Query 63 ETPPKVVFIIGPTGVGKSRL 82 ETPP +V I+GP+ VGK+ L Sbjct 76 ETPPIIVAIVGPSKVGKTTL 95 > ath:AT3G04340 emb2458 (embryo defective 2458); ATP binding / ATPase/ metalloendopeptidase/ nucleoside-triphosphatase/ nucleotide binding Length=1320 Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 0/42 (0%) Query 57 APEECAETPPKVVFIIGPTGVGKSRLGLDICLELRKNGINAE 98 A +E P+ V I+G G GK+ L L I E R +N E Sbjct 808 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVE 849 > hsa:57674 RNF213, C17orf27, DKFZp762N1115, FLJ13051, KIAA1554, KIAA1618, MGC46622, MGC9929, NET57; ring finger protein 213 Length=5256 Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%) Query 69 VFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASAAEREAVPH 128 V I+G TG GK+RL + +LR+ G NA+ + + D+ ++ AE A + Sbjct 2465 VIIMGETGCGKTRL-IKFLSDLRRGGTNADTIKLVKVHGGTTADMIYSRVREAENVAFAN 2523 Query 129 ---HLLD 132 H LD Sbjct 2524 KDQHQLD 2530 > eco:b3931 hslU, clpY, ECK3923, htpI, JW3902; molecular chaperone and ATPase component of HslUV protease; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU Length=443 Score = 30.0 bits (66), Expect = 2.3, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 0/21 (0%) Query 63 ETPPKVVFIIGPTGVGKSRLG 83 E PK + +IGPTGVGK+ + Sbjct 47 EVTPKNILMIGPTGVGKTEIA 67 > eco:b0794 ybhF, ECK0783, JW5104; fused predicted transporter subunits of ABC superfamily: ATP-binding components; K01990 ABC-2 type transport system ATP-binding protein Length=578 Score = 30.0 bits (66), Expect = 2.4, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Query 45 KFPFLASNTPAMAPEECAETPPKVVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADS 104 +FP + + PA+AP +C V ++GP G GK+ L + L+ + +A ++ D Sbjct 14 RFPGM--DKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSATVIGFDP 71 Query 105 MQ 106 ++ Sbjct 72 IK 73 > mmu:240255 Ythdc2, 3010002F02Rik, BC037178; YTH domain containing 2 (EC:3.6.4.13) Length=1445 Score = 29.6 bits (65), Expect = 2.7, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 30/61 (49%), Gaps = 10/61 (16%) Query 67 KVVFIIGPTGVGKS----RLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASAAE 122 KVV I+G TG GK+ + LD C KNGI I Q + IA A+ AAE Sbjct 225 KVVLIVGETGSGKTTQIPQFLLDDCF---KNGIPCRIFCT---QPRRLAAIAVAERVAAE 278 Query 123 R 123 R Sbjct 279 R 279 > ath:AT1G15310 ATHSRP54A (ARABIDOPSIS THALIANA SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT); 7S RNA binding / GTP binding / mRNA binding / nucleoside-triphosphatase/ nucleotide binding; K03106 signal recognition particle subunit SRP54 Length=479 Score = 29.6 bits (65), Expect = 2.7, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Query 49 LASNTPAMAPEECAETPPKVVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQ 106 L PA AP++ P VV +G G GK+ +K G A +V AD+ + Sbjct 87 LDPGKPAFAPKK---AKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKAALVCADTFR 141 > hsa:64848 YTHDC2; YTH domain containing 2 (EC:3.6.4.13) Length=1430 Score = 29.6 bits (65), Expect = 2.8, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 30/61 (49%), Gaps = 10/61 (16%) Query 67 KVVFIIGPTGVGKS----RLGLDICLELRKNGINAEIVSADSMQVYKGCDIATAKASAAE 122 KVV I+G TG GK+ + LD C KNGI I Q + IA A+ AAE Sbjct 210 KVVLIVGETGSGKTTQIPQFLLDDCF---KNGIPCRIFCT---QPRRLAAIAVAERVAAE 263 Query 123 R 123 R Sbjct 264 R 264 > cpv:cgd7_3430 protein kinase Length=637 Score = 29.6 bits (65), Expect = 2.8, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 0/40 (0%) Query 88 LELRKNGINAEIVSADSMQVYKGCDIATAKASAAEREAVP 127 L R++G+NA VS V++ C+I +++S AVP Sbjct 116 LTSRRDGLNAPPVSFKKFNVFQHCNIQGSQSSPYNLHAVP 155 > tgo:TGME49_057740 UMP-CMP kinase, putative (EC:2.7.4.3); K13800 UMP-CMP kinase [EC:2.7.4.- 2.7.4.14] Length=274 Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Query 38 RFPTFLGKFPFLA-SNTPAMAPEECAETPPKVVFIIGPTGVGK 79 R T GK +A +NT C E PK+VF++G G GK Sbjct 4 RISTLCGKRDAMAATNTIESGTTRC-EKKPKIVFVLGGPGAGK 45 > ath:AT1G05910 cell division cycle protein 48-related / CDC48-related Length=1210 Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%) Query 54 PAMAPEECAE---TPPKVVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVYKG 110 P + PE A TPP+ V + GP G GK+ + + K G S + KG Sbjct 400 PLLYPEFFASYSITPPRGVLLCGPPGTGKTLIARALACAASKAGQKV------SFYMRKG 453 Query 111 CDIATAKASAAERE 124 D+ + AER+ Sbjct 454 ADVLSKWVGEAERQ 467 > ath:AT2G45700 sterile alpha motif (SAM) domain-containing protein Length=723 Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust. Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 0/27 (0%) Query 66 PKVVFIIGPTGVGKSRLGLDICLELRK 92 PK +F+IG +GK RL L++ LR+ Sbjct 559 PKTLFLIGSYTIGKERLFLEVARVLRE 585 > ath:AT1G79050 DNA repair protein recA Length=343 Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust. Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 0/37 (0%) Query 67 KVVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSAD 103 +VV I GP GK+ L L E++K G NA +V A+ Sbjct 136 RVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAE 172 > xla:398492 smc5, SMC-5; structural maintenance of chromosomes 5 Length=1065 Score = 29.3 bits (64), Expect = 3.8, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%) Query 59 EECAETP-PKVVFIIGPTGVGKSRLGLDICLELRKNGINAEIVSADSMQVY--KGC 111 ++C P P + I+G G GKS + ICL L G A I AD + Y +GC Sbjct 43 DQCEVFPGPYLNMIVGANGTGKSSIVCAICLGLA--GKTAFIGRADKVGFYVKRGC 96 > sce:YPL217C BMS1; Bms1p; K14569 ribosome biogenesis protein BMS1 Length=1183 Score = 29.3 bits (64), Expect = 4.1, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%) Query 58 PEECAETPPKVVFIIGPTGVGKSRLGLDICLELRKNGIN 96 PE+ + PP +V ++GP G GK+ L + + K+ +N Sbjct 63 PED--DPPPFIVAVVGPPGTGKTTLIRSLVRRMTKSTLN 99 > pfa:PF11_0175 heat shock protein 101, putative Length=906 Score = 28.9 bits (63), Expect = 4.3, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 0/28 (0%) Query 63 ETPPKVVFIIGPTGVGKSRLGLDICLEL 90 E P +GPTGVGK+ L + +EL Sbjct 628 EKPIGTFLFLGPTGVGKTELAKTLAIEL 655 > ath:AT5G19410 ABC transporter family protein Length=624 Score = 28.9 bits (63), Expect = 5.5, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 0/45 (0%) Query 38 RFPTFLGKFPFLASNTPAMAPEECAETPPKVVFIIGPTGVGKSRL 82 R+ + + ++TP + A K++ ++GP+G GKS L Sbjct 49 RYSLTVTNLSYTINHTPILNSVSLAAESSKILAVVGPSGTGKSTL 93 > mmu:381917 Dnahc3, BC051401, Dnah3; dynein, axonemal, heavy chain 3; K10408 dynein heavy chain, axonemal Length=4088 Score = 28.9 bits (63), Expect = 5.6, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 0/25 (0%) Query 69 VFIIGPTGVGKSRLGLDICLELRKN 93 + +GPTG GKS + D L L KN Sbjct 2042 ILFVGPTGTGKSAITNDFLLHLPKN 2066 > mmu:622554 1700123I01Rik; RIKEN cDNA 1700123I01 gene Length=256 Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust. Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%) Query 2 HTSSPPPQAAGLARGRTGFISSIF 25 H+S PPP+ G ARG GF+S++F Sbjct 223 HSSPPPPKEPG-ARGFLGFLSALF 245 > cpv:cgd4_1480 BMS1 like GTpase involved in ribosome biogenesis ; K14569 ribosome biogenesis protein BMS1 Length=1051 Score = 28.5 bits (62), Expect = 6.0, Method: Composition-based stats. Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 0/23 (0%) Query 60 ECAETPPKVVFIIGPTGVGKSRL 82 E TPP +V + GP GVGK+ L Sbjct 37 EDESTPPYIVAVQGPPGVGKTTL 59 > ath:AT5G52860 ABC transporter family protein Length=589 Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 17/85 (20%) Query 5 SPPPQAAGLARGRTGFISSIFGTSSSFSPSNSLRFPTFLGKFPFLASNTPAMAPEECAET 64 SPPP+ A + +I TS S LRFP A+ P+ T Sbjct 6 SPPPETAAYTLTTSSISYTIPKTSLSL-----LRFP---------ATEPPSFILRNITLT 51 Query 65 --PPKVVFIIGPTGVGKSRLGLDIC 87 P +++ ++GP+G GKS L LDI Sbjct 52 AHPTEILAVVGPSGAGKSTL-LDIL 75 > hsa:221264 AKD1, AKD2, C6orf199, C6orf224, FLJ16163, FLJ25791, FLJ34784, FLJ42177, MGC126763, MGC138153, MGC177059, MGC180194, MGC184281, MGC26954, RP1-70A9.1, dJ70A9.1; adenylate kinase domain containing 1 Length=1911 Score = 28.5 bits (62), Expect = 6.7, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 0/52 (0%) Query 39 FPTFLGKFPFLASNTPAMAPEECAETPPKVVFIIGPTGVGKSRLGLDICLEL 90 F + K FL +A EE + PP + ++GP G GK+ G + +L Sbjct 964 FSSAEAKEKFLEHPEDYVAHEEPLKAPPLRICLVGPQGSGKTMCGRQLAEKL 1015 > dre:558115 zgc:153738 Length=818 Score = 28.5 bits (62), Expect = 7.2, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 0/27 (0%) Query 67 KVVFIIGPTGVGKSRLGLDICLELRKN 93 K + ++GP+GVGK L IC E N Sbjct 557 KTILLVGPSGVGKKMLVHAICQETGAN 583 > dre:393941 psmc2, MGC63995, zgc:63995; proteasome (prosome, macropain) 26S subunit, ATPase 2; K03061 26S proteasome regulatory subunit T1 Length=433 Score = 28.1 bits (61), Expect = 7.6, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 11/64 (17%) Query 53 TPAMAPEECAE---TPPKVVFIIGPTGVGKSRLGLDICLELRKNGINA---EIVSADSMQ 106 TP + PE PPK V + GP G GK+ +C N +A ++ ++ +Q Sbjct 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKT-----LCARAVANRTDACFIRVIGSELVQ 247 Query 107 VYKG 110 Y G Sbjct 248 KYVG 251 > xla:399327 psmc2, xMSS1; proteasome (prosome, macropain) 26S subunit, ATPase, 2; K03061 26S proteasome regulatory subunit T1 Length=433 Score = 28.1 bits (61), Expect = 7.6, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 11/64 (17%) Query 53 TPAMAPEECAE---TPPKVVFIIGPTGVGKSRLGLDICLELRKNGINA---EIVSADSMQ 106 TP + PE PPK V + GP G GK+ +C N +A ++ ++ +Q Sbjct 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKT-----LCARAVANRTDACFIRVIGSELVQ 247 Query 107 VYKG 110 Y G Sbjct 248 KYVG 251 > tgo:TGME49_088700 chromosome segregation protein smc1, putative (EC:3.2.1.52); K06636 structural maintenance of chromosome 1 Length=1638 Score = 28.1 bits (61), Expect = 7.7, Method: Composition-based stats. Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 3/30 (10%) Query 69 VFIIGPTGVGKSRLGLDICLELRKNGINAE 98 V +IGP G GKS L IC L G+NA+ Sbjct 256 VAVIGPNGAGKSNLTDAICFAL---GVNAK 282 > cel:C52E4.4 rpt-1; proteasome Regulatory Particle, ATPase-like family member (rpt-1); K03061 26S proteasome regulatory subunit T1 Length=435 Score = 28.1 bits (61), Expect = 7.8, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 11/64 (17%) Query 53 TPAMAPEECAE---TPPKVVFIIGPTGVGKSRLGLDICLELRKNGINA---EIVSADSMQ 106 TP + PE PPK V + GP G GK+ +C N +A ++ ++ +Q Sbjct 195 TPLLHPERYVNLGIEPPKGVLLYGPPGTGKT-----LCARAVANRTDACFIRVIGSELVQ 249 Query 107 VYKG 110 Y G Sbjct 250 KYVG 253 Lambda K H 0.317 0.132 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2428006156 Database: egene_temp_file_orthology_annotation_similarity_blast_database_966 Posted date: Sep 16, 2011 8:45 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40