bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_1284_orf1
Length=116
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_036650 DEAD/DEAH box helicase, putative (EC:5.99.1.... 188 4e-48
bbo:BBOV_II004470 18.m06373; p68-like protein; K12823 ATP-depe... 170 1e-42
tpv:TP04_0562 RNA helicase; K12823 ATP-dependent RNA helicase ... 168 4e-42
cpv:cgd2_1010 hypothetical protein ; K12823 ATP-dependent RNA ... 147 8e-36
pfa:PF14_0437 helicase, putative 138 5e-33
mmu:67040 Ddx17, 2610007K22Rik, A430025E01Rik, AI047725, C8092... 136 1e-32
hsa:10521 DDX17, DKFZp761H2016, P72, RH70; DEAD (Asp-Glu-Ala-A... 136 2e-32
xla:398649 ddx17, MGC80019; DEAD (Asp-Glu-Ala-Asp) box polypep... 131 5e-31
xla:399382 ddx5, MGC81559; DEAD (Asp-Glu-Ala-Asp) box polypept... 126 2e-29
ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823 A... 122 2e-28
xla:379390 MGC53795; similar to DEAD/H (Asp-Glu-Ala-Asp/His) b... 121 6e-28
mmu:13207 Ddx5, 2600009A06Rik, G17P1, HUMP68, Hlr1, MGC118083,... 121 7e-28
mmu:432554 Gm12183, OTTMUSG00000005521; predicted gene 12183; ... 120 1e-27
dre:322206 ddx5, wu:fa56a07, wu:fb11e01, wu:fb16c10, wu:fb53b0... 119 2e-27
hsa:1655 DDX5, DKFZp434E109, DKFZp686J01190, G17P1, HLR1, HUMP... 119 3e-27
ath:AT5G63120 ethylene-responsive DEAD box RNA helicase, putat... 118 4e-27
sce:YNL112W DBP2; Dbp2p (EC:3.6.1.-); K12823 ATP-dependent RNA... 117 9e-27
dre:556764 similar to Probable RNA-dependent helicase p72 (DEA... 115 4e-26
dre:321948 ddx46, fb39a03, wu:fb39a03; DEAD (Asp-Glu-Ala-Asp) ... 109 2e-24
xla:444634 MGC84147 protein 107 8e-24
hsa:9879 DDX46, FLJ25329, KIAA0801, MGC9936, PRPF5, Prp5; DEAD... 107 1e-23
mmu:212880 Ddx46, 2200005K02Rik, 8430438J23Rik, AI325430, AI95... 107 1e-23
xla:380261 ddx42, MGC54025; DEAD (Asp-Glu-Ala-Asp) box polypep... 103 1e-22
ath:AT1G20920 DEAD box RNA helicase, putative; K12811 ATP-depe... 103 1e-22
mmu:72047 Ddx42, 1810047H21Rik, AW319508, AW556242, B430002H05... 103 1e-22
hsa:11325 DDX42, FLJ43179, RHELP, RNAHP, SF3b125; DEAD (Asp-Gl... 103 1e-22
tgo:TGME49_113240 DEAD/DEAH box helicase, putative (EC:5.99.1.... 102 2e-22
ath:AT3G09620 DEAD/DEAH box helicase, putative 100 9e-22
dre:503932 ddx42, im:7148194, zgc:111815; DEAD (Asp-Glu-Ala-As... 100 1e-21
tpv:TP03_0532 ATP-dependent RNA helicase; K12811 ATP-dependent... 96.7 2e-20
bbo:BBOV_III000190 17.m07043; p68 RNA helicase protein 95.9 3e-20
tpv:TP03_0830 ATP-dependent RNA helicase 93.6 1e-19
cel:F53H1.1 hypothetical protein; K12811 ATP-dependent RNA hel... 92.0 4e-19
cel:C46F11.4 hypothetical protein; K12835 ATP-dependent RNA he... 91.7 6e-19
ath:AT2G47330 DEAD/DEAH box helicase, putative; K12835 ATP-dep... 89.4 2e-18
pfa:PFE0430w ATP-dependent RNA Helicase, putative; K12811 ATP-... 89.4 3e-18
cel:F58E10.3 hypothetical protein; K12823 ATP-dependent RNA he... 87.8 7e-18
hsa:55510 DDX43, CT13, DKFZp434H2114, HAGE; DEAD (Asp-Glu-Ala-... 86.3 2e-17
ath:AT3G01540 DRH1; DRH1 (DEAD BOX RNA HELICASE 1); ATP-depend... 86.3 2e-17
bbo:BBOV_I004920 19.m02284; DEAD/DEAH box helicase and helicas... 84.0 1e-16
mmu:100048658 Ddx43, OTTMUSG00000019690; DEAD (Asp-Glu-Ala-Asp... 83.6 1e-16
ath:AT3G06480 DEAD box RNA helicase, putative 83.2 2e-16
dre:100136871 ddx43, zgc:174910; DEAD (Asp-Glu-Ala-Asp) box po... 83.2 2e-16
tgo:TGME49_021650 ATP-dependent RNA helicase, putative (EC:3.1... 82.8 2e-16
ath:AT5G51280 DEAD-box protein abstrakt, putative; K13116 ATP-... 82.0 4e-16
ath:AT4G33370 DEAD-box protein abstrakt, putative 82.0 4e-16
pfa:PFE0925c snrnp protein, putative; K12858 ATP-dependent RNA... 81.6 5e-16
hsa:51428 DDX41, ABS, MGC8828; DEAD (Asp-Glu-Ala-Asp) box poly... 81.3 7e-16
dre:562123 ddx59, si:dkey-39e8.2; DEAD (Asp-Glu-Ala-Asp) box p... 80.9 1e-15
bbo:BBOV_II003280 18.m06276; DEAD box RNA helicase; K12858 ATP... 80.9 1e-15
> tgo:TGME49_036650 DEAD/DEAH box helicase, putative (EC:5.99.1.3);
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=550
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 87/116 (75%), Positives = 100/116 (86%), Gaps = 0/116 (0%)
Query 1 EELGAKLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPC 60
+ LG+KL RVDW+ ++LVPFEKNFYVEHP +A M EEA+RIR +EITI+ G NVPKP
Sbjct 69 DALGSKLQRVDWKTIDLVPFEKNFYVEHPAVANMSAEEAERIRRANEITIVHGHNVPKPV 128
Query 61 PTFEHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
PTFE+TSFPSY+LD I+ GFQKPT IQ+QGWPIALSGRDMIGIAETGSGKTLAFL
Sbjct 129 PTFEYTSFPSYILDVINQTGFQKPTAIQVQGWPIALSGRDMIGIAETGSGKTLAFL 184
> bbo:BBOV_II004470 18.m06373; p68-like protein; K12823 ATP-dependent
RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=529
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 92/114 (80%), Gaps = 0/114 (0%)
Query 3 LGAKLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPT 62
LG++LS +DW + LV FEKNFY EH E++ M + DR+R + EITIIAG +VPKP +
Sbjct 50 LGSRLSTIDWSKETLVAFEKNFYKEHSEVSAMSSADVDRVRKEREITIIAGRDVPKPVVS 109
Query 63 FEHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
FEHTSFP Y+L AI AAGF PTPIQ+QGWPIALSGRD+IGIAETGSGKTLAFL
Sbjct 110 FEHTSFPDYILKAIRAAGFTAPTPIQVQGWPIALSGRDVIGIAETGSGKTLAFL 163
> tpv:TP04_0562 RNA helicase; K12823 ATP-dependent RNA helicase
DDX5/DBP2 [EC:3.6.4.13]
Length=635
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 79/116 (68%), Positives = 93/116 (80%), Gaps = 0/116 (0%)
Query 1 EELGAKLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPC 60
E LGA L V+W ++ELV FEKNFYVEHPE+ M +EAD IR EIT++ G +VPKP
Sbjct 150 ENLGAGLQPVNWNQIELVKFEKNFYVEHPEVKAMTQQEADEIRRAKEITVVHGRDVPKPV 209
Query 61 PTFEHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
FE+TSFP Y+L +I AAGF++PTPIQ+Q WPIALSGRDMIGIAETGSGKTLAFL
Sbjct 210 VKFEYTSFPRYILSSIEAAGFKEPTPIQVQSWPIALSGRDMIGIAETGSGKTLAFL 265
> cpv:cgd2_1010 hypothetical protein ; K12823 ATP-dependent RNA
helicase DDX5/DBP2 [EC:3.6.4.13]
Length=586
Score = 147 bits (371), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 86/115 (74%), Gaps = 0/115 (0%)
Query 2 ELGAKLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCP 61
+ G +L ++DW L+PFEKNFY EH ++ + E+ D+IR + +ITIIAG NVPKP
Sbjct 109 KFGDRLGKLDWGSQNLIPFEKNFYHEHESVSSLSNEQVDQIRKERKITIIAGENVPKPIT 168
Query 62 TFEHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
+F + FP++L+DA+ GF +PT IQ+QGWP+ALSG DMIGIAETGSGKTL FL
Sbjct 169 SFVTSGFPNFLVDALYRTGFTEPTAIQVQGWPVALSGHDMIGIAETGSGKTLGFL 223
> pfa:PF14_0437 helicase, putative
Length=527
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 80/113 (70%), Gaps = 0/113 (0%)
Query 4 GAKLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTF 63
G L+ +DW+ + LVPFEKNFY EH +I+++ +E IR H+ITI+ G NVPKP +
Sbjct 56 GKNLAPIDWKTINLVPFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVPKPVVSI 115
Query 64 EHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
FP Y++ ++ PTPIQ+QGWPIALSG+DMIG AETGSGKTLAF+
Sbjct 116 NKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFI 168
> mmu:67040 Ddx17, 2610007K22Rik, A430025E01Rik, AI047725, C80929,
Gm926, MGC79147, p72; DEAD (Asp-Glu-Ala-Asp) box polypeptide
17 (EC:3.6.4.13); K13178 ATP-dependent RNA helicase DDX17
[EC:3.6.4.13]
Length=650
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 79/113 (69%), Gaps = 0/113 (0%)
Query 4 GAKLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTF 63
G +L + W EL FEKNFYVEHPE+A++ P E D +R EIT+ G PKP F
Sbjct 35 GERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAF 94
Query 64 EHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
H +FP Y++D + F +PTPIQ QG+P+ALSGRDM+GIA+TGSGKTLA+L
Sbjct 95 HHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYL 147
> hsa:10521 DDX17, DKFZp761H2016, P72, RH70; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 17 (EC:3.6.4.13); K13178 ATP-dependent
RNA helicase DDX17 [EC:3.6.4.13]
Length=731
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 79/113 (69%), Gaps = 0/113 (0%)
Query 4 GAKLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTF 63
G +L + W EL FEKNFYVEHPE+A++ P E D +R EIT+ G PKP F
Sbjct 114 GERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAF 173
Query 64 EHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
H +FP Y++D + F +PTPIQ QG+P+ALSGRDM+GIA+TGSGKTLA+L
Sbjct 174 HHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYL 226
> xla:398649 ddx17, MGC80019; DEAD (Asp-Glu-Ala-Asp) box polypeptide
17; K13178 ATP-dependent RNA helicase DDX17 [EC:3.6.4.13]
Length=610
Score = 131 bits (330), Expect = 5e-31, Method: Composition-based stats.
Identities = 62/113 (54%), Positives = 79/113 (69%), Gaps = 1/113 (0%)
Query 4 GAKLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTF 63
G +L + W EL FEKNFY EHPE+A+M + + +R EITI GVN PKP F
Sbjct 26 GERLRKKRWDLNELPKFEKNFYTEHPEVARMTQHDVEELRRKKEITI-RGVNCPKPLYAF 84
Query 64 EHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
+FP Y+LD + F++PTPIQ QG+P+ALSGRDM+GIA+TGSGKTLA+L
Sbjct 85 HQANFPQYVLDVLLDQRFKEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYL 137
> xla:399382 ddx5, MGC81559; DEAD (Asp-Glu-Ala-Asp) box polypeptide
5; K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=608
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query 4 GAKLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTF 63
G +L + W EL FEKNFY EHP++ + P+E D+ R EIT+ G+N PKP F
Sbjct 36 GERLMKKKWNLDELPKFEKNFYQEHPDVVRRTPQECDQYRRSKEITV-RGINCPKPILNF 94
Query 64 EHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
SFP+ +++AI F +PTPIQ QGWP+ALSG DM+G+A TGSGKTL++L
Sbjct 95 NEASFPANVMEAIKRQNFTEPTPIQGQGWPVALSGLDMVGVAMTGSGKTLSYL 147
> ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=501
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Query 17 LVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEHTSFPSYLLDAI 76
L PFEKNFYVE P +A M E + R EIT+ G ++PKP +F FP Y+L+ +
Sbjct 56 LTPFEKNFYVESPAVAAMTDTEVEEYRKLREITV-EGKDIPKPVKSFRDVGFPDYVLEEV 114
Query 77 SAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
AGF +PTPIQ QGWP+A+ GRD+IGIAETGSGKTL++L
Sbjct 115 KKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYL 154
> xla:379390 MGC53795; similar to DEAD/H (Asp-Glu-Ala-Asp/His)
box polypeptide 5 (RNA helicase, 68kDa); K12823 ATP-dependent
RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=607
Score = 121 bits (303), Expect = 6e-28, Method: Composition-based stats.
Identities = 56/113 (49%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
Query 4 GAKLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTF 63
G +L + W EL FEKNFY E P++++ P+E D+ R EIT+ G+N PKP F
Sbjct 34 GERLMKKKWNLDELPKFEKNFYQELPDVSRRTPQECDQYRRSKEITV-RGLNCPKPVLNF 92
Query 64 EHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
SFP+ +++ I F +PTPIQ QGWP+ALSG DM+G+A TGSGKTL++L
Sbjct 93 HEASFPANVMEVIKRLNFTEPTPIQGQGWPVALSGLDMVGVAMTGSGKTLSYL 145
> mmu:13207 Ddx5, 2600009A06Rik, G17P1, HUMP68, Hlr1, MGC118083,
p68; DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (EC:3.6.4.13);
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=615
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 75/113 (66%), Gaps = 1/113 (0%)
Query 4 GAKLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTF 63
G KL + W EL FEKNFY EHP++A+ +E D R EIT+ G N PKP F
Sbjct 38 GEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITV-RGHNCPKPVLNF 96
Query 64 EHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
+FP+ ++D I+ F +PT IQ QGWP+ALSG DM+G+A+TGSGKTL++L
Sbjct 97 YEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYL 149
> mmu:432554 Gm12183, OTTMUSG00000005521; predicted gene 12183;
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=670
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 75/113 (66%), Gaps = 1/113 (0%)
Query 4 GAKLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTF 63
G KL + W EL FEKNFY EHP++A+ +E D R EIT+ G N PKP F
Sbjct 93 GEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITV-RGHNCPKPVLKF 151
Query 64 EHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
+FP+ ++D I+ F +PT IQ QGWP+ALSG DM+G+A+TGSGKTL++L
Sbjct 152 YEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYL 204
> dre:322206 ddx5, wu:fa56a07, wu:fb11e01, wu:fb16c10, wu:fb53b05;
DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (EC:3.6.1.-);
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=518
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
Query 4 GAKLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTF 63
G +L + W EL FEKNFY E+P++A+ +E + R EIT+ G + PKP F
Sbjct 40 GDRLRKKHWNLDELPKFEKNFYQENPDVARRSAQEVEHYRRSKEITV-KGRDGPKPIVKF 98
Query 64 EHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
+FP Y++D I+ + PTPIQ QGWP+ALSG+DM+GIA+TGSGKTL++L
Sbjct 99 HEANFPKYVMDVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYL 151
> hsa:1655 DDX5, DKFZp434E109, DKFZp686J01190, G17P1, HLR1, HUMP68,
p68; DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (EC:3.6.4.13);
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=614
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 75/113 (66%), Gaps = 1/113 (0%)
Query 4 GAKLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTF 63
G KL + W EL FEKNFY EHP++A+ +E + R EIT+ G N PKP F
Sbjct 38 GEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITV-RGHNCPKPVLNF 96
Query 64 EHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
+FP+ ++D I+ F +PT IQ QGWP+ALSG DM+G+A+TGSGKTL++L
Sbjct 97 YEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYL 149
> ath:AT5G63120 ethylene-responsive DEAD box RNA helicase, putative
(RH30)
Length=484
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query 16 ELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEHTSFPSYLLDA 75
LV FEKNFYVE P + M ++ RT+ +I++ G +VPKP F+ +FP +L+A
Sbjct 121 NLVHFEKNFYVESPTVQAMTEQDVAMYRTERDISV-EGRDVPKPMKMFQDANFPDNILEA 179
Query 76 ISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
I+ GF +PTPIQ QGWP+AL GRD+IGIAETGSGKTLA+L
Sbjct 180 IAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYL 220
> sce:YNL112W DBP2; Dbp2p (EC:3.6.1.-); K12823 ATP-dependent RNA
helicase DDX5/DBP2 [EC:3.6.4.13]
Length=546
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Query 16 ELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEHTSFPSYLLDA 75
+L FEKNFYVEH + E + R ++E+TI +G ++PKP TF+ FP Y+L+
Sbjct 69 KLPTFEKNFYVEHESVRDRSDSEIAQFRKENEMTI-SGHDIPKPITTFDEAGFPDYVLNE 127
Query 76 ISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAF 115
+ A GF KPT IQ QGWP+ALSGRDM+GIA TGSGKTL++
Sbjct 128 VKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSY 167
> dre:556764 similar to Probable RNA-dependent helicase p72 (DEAD-box
protein p72) (DEAD-box protein 17); K13178 ATP-dependent
RNA helicase DDX17 [EC:3.6.4.13]
Length=671
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Query 4 GAKLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTF 63
G +L + W +L FEKNFY E+PE+ M + + R EIT+ G PKP F
Sbjct 39 GDRLRKKKWDLDQLPKFEKNFYNENPEVHHMSQYDVEEYRRKREITV-RGSGCPKPVTNF 97
Query 64 EHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
FP Y++D + F++PT IQ QG+P+ALSGRDM+GIA+TGSGKTLA+L
Sbjct 98 HQAQFPQYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYL 150
> dre:321948 ddx46, fb39a03, wu:fb39a03; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 46 (EC:3.6.4.13); K12811 ATP-dependent RNA
helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1018
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 69/107 (64%), Gaps = 0/107 (0%)
Query 10 VDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEHTSFP 69
VD Q+++ PF KNFYVE PE+A+M PEE R + E + G PKP T+
Sbjct 289 VDHQKIQYEPFRKNFYVEVPELARMSPEEVSEYRLELEGISVKGKGCPKPIKTWVQCGIS 348
Query 70 SYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
+L+A+ ++KPTPIQ Q P +SGRD+IGIA+TGSGKT+AFL
Sbjct 349 MKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFL 395
> xla:444634 MGC84147 protein
Length=450
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
Query 10 VDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITI-IAGVNVPKPCPTFEHTSF 68
+D +E PFEKNFY EH EI P++ +R H++ + ++G P+ C +F H F
Sbjct 201 IDHTEIEYPPFEKNFYEEHEEITSQTPQQITELR--HKLNLRVSGAAAPRLCSSFAHFGF 258
Query 69 PSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
L+ I + + KPTPIQ QG P+ALSGRDMIGIA+TGSGKT AF+
Sbjct 259 DEQLMHQIRKSEYTKPTPIQCQGIPVALSGRDMIGIAKTGSGKTAAFI 306
> hsa:9879 DDX46, FLJ25329, KIAA0801, MGC9936, PRPF5, Prp5; DEAD
(Asp-Glu-Ala-Asp) box polypeptide 46 (EC:3.6.4.13); K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1031
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 69/107 (64%), Gaps = 0/107 (0%)
Query 10 VDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEHTSFP 69
VD ++E PF KNFYVE PE+A+M EE + R + E + G PKP ++
Sbjct 321 VDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGIS 380
Query 70 SYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
+L+++ G++KPTPIQ Q P +SGRD+IGIA+TGSGKT+AFL
Sbjct 381 MKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFL 427
> mmu:212880 Ddx46, 2200005K02Rik, 8430438J23Rik, AI325430, AI957095,
MGC116676, MGC31579, mKIAA0801; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 46 (EC:3.6.4.13); K12811 ATP-dependent RNA
helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1031
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 69/107 (64%), Gaps = 0/107 (0%)
Query 10 VDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEHTSFP 69
VD ++E PF KNFYVE PE+A+M EE + R + E + G PKP ++
Sbjct 321 VDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGIS 380
Query 70 SYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
+L+++ G++KPTPIQ Q P +SGRD+IGIA+TGSGKT+AFL
Sbjct 381 MKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFL 427
> xla:380261 ddx42, MGC54025; DEAD (Asp-Glu-Ala-Asp) box polypeptide
42 (EC:3.6.4.13); K12835 ATP-dependent RNA helicase DDX42
[EC:3.6.4.13]
Length=947
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Query 10 VDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITI-IAGVNVPKPCPTFEHTSF 68
+D +E PFEKNFY EH I P++ +R H++ + ++G P+ C +F H F
Sbjct 200 IDHTEIEYPPFEKNFYEEHEAITSQTPQQITELR--HKLNLRVSGAAPPRLCSSFAHFGF 257
Query 69 PSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
LL I + + +PTPIQ QG P+ALSGRDMIGIA+TGSGKT AF+
Sbjct 258 DEQLLHQIRKSEYTQPTPIQCQGIPVALSGRDMIGIAKTGSGKTAAFI 305
> ath:AT1G20920 DEAD box RNA helicase, putative; K12811 ATP-dependent
RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=828
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query 6 KLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEH 65
KLS VD ++E PF KNFY+E +I++M EE + R + E+ + G +VP+P +
Sbjct 137 KLSLVDHSKIEYEPFRKNFYIEVKDISRMTQEEVNTYRKELELKV-HGKDVPRPIKFWHQ 195
Query 66 TSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
T S +LD + ++KP PIQ Q PI +SGRD IG+A+TGSGKTL F+
Sbjct 196 TGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFV 246
> mmu:72047 Ddx42, 1810047H21Rik, AW319508, AW556242, B430002H05Rik,
RHELP, RNAHP, SF3b125; DEAD (Asp-Glu-Ala-Asp) box polypeptide
42 (EC:3.6.4.13); K12835 ATP-dependent RNA helicase
DDX42 [EC:3.6.4.13]
Length=929
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Query 10 VDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITI-IAGVNVPKPCPTFEHTSF 68
+D ++ PFEKNFY EH EI + P++ +R H++ + ++G P+P +F H F
Sbjct 203 IDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLR--HKLNLRVSGAAPPRPGSSFAHFGF 260
Query 69 PSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
L+ I + + +PTPIQ QG P+ALSGRDMIGIA+TGSGKT AF+
Sbjct 261 DEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFI 308
> hsa:11325 DDX42, FLJ43179, RHELP, RNAHP, SF3b125; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 42 (EC:3.6.4.13); K12835 ATP-dependent
RNA helicase DDX42 [EC:3.6.4.13]
Length=938
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Query 10 VDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITI-IAGVNVPKPCPTFEHTSF 68
+D ++ PFEKNFY EH EI + P++ +R H++ + ++G P+P +F H F
Sbjct 203 IDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLR--HKLNLRVSGAAPPRPGSSFAHFGF 260
Query 69 PSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
L+ I + + +PTPIQ QG P+ALSGRDMIGIA+TGSGKT AF+
Sbjct 261 DEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFI 308
> tgo:TGME49_113240 DEAD/DEAH box helicase, putative (EC:5.99.1.3);
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=685
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 67/114 (58%), Gaps = 0/114 (0%)
Query 3 LGAKLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPT 62
+G+ L W +L P EK+FYVEHP +A EE + + I P+P +
Sbjct 219 MGSHLVEPKWSEEQLAPIEKDFYVEHPSVASRTDEEVAAFLEANAMRIDGQEPKPRPVFS 278
Query 63 FEHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
FE T FP+ + + + F +PT IQ GWP ALSGRDMIGIA+TGSGKTL FL
Sbjct 279 FEETGFPTAIQNQLRKMNFAEPTAIQKIGWPTALSGRDMIGIAQTGSGKTLGFL 332
> ath:AT3G09620 DEAD/DEAH box helicase, putative
Length=989
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Query 6 KLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEH 65
KLS VD ++E PF KNFY+E +I++M + + R + E+ + G +VP+P +
Sbjct 342 KLSLVDHSKIEYEPFRKNFYIEVKDISRMTQDAVNAYRKELELKV-HGKDVPRPIQFWHQ 400
Query 66 TSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
T S +LD + ++KP PIQ Q PI +SGRD IG+A+TGSGKTL F+
Sbjct 401 TGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFV 451
> dre:503932 ddx42, im:7148194, zgc:111815; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 42 (EC:3.6.1.-); K12835 ATP-dependent RNA
helicase DDX42 [EC:3.6.4.13]
Length=908
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Query 10 VDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEHTSFP 69
+D ++ PFEKNFY EH EI+ + E +R + + +G PKP +F H F
Sbjct 205 IDHSEIDYSPFEKNFYNEHEEISSLTGAEVVELRRKLNLKV-SGAAPPKPATSFAHFGFD 263
Query 70 SYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
L+ I + + +PTPIQ QG PIALSGRD IGIA+TGSGKT AF+
Sbjct 264 EQLMHQIRKSEYTQPTPIQCQGVPIALSGRDAIGIAKTGSGKTAAFI 310
> tpv:TP03_0532 ATP-dependent RNA helicase; K12811 ATP-dependent
RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=894
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 64/111 (57%), Gaps = 0/111 (0%)
Query 6 KLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEH 65
+L RVD +++ +PF KNFYV+ I M E D R + + G P+P +F
Sbjct 362 ELPRVDHSKIDYLPFRKNFYVQVSSITNMGEHEVDAFRKANGNIRVYGKKCPRPISSFSQ 421
Query 66 TSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
P +L + ++KP PIQ+Q P + GRD+IGIAETGSGKTLAFL
Sbjct 422 CGLPDPILKILEKREYEKPFPIQMQCIPALMCGRDVIGIAETGSGKTLAFL 472
> bbo:BBOV_III000190 17.m07043; p68 RNA helicase protein
Length=568
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 64/110 (58%), Gaps = 0/110 (0%)
Query 6 KLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEH 65
KL +DW +LV +K+FY PE P EE + I H+I I +PKP TF+
Sbjct 128 KLPNIDWNGKQLVEIKKDFYDLSPEANNRPGEEIEAILESHQIIIDGETPLPKPVNTFDE 187
Query 66 TSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAF 115
F + I GF +PTPIQ GW L+GRD++G+++TGSGKTLAF
Sbjct 188 AVFNEAIQRIIKNMGFIEPTPIQKVGWTSCLTGRDVVGVSQTGSGKTLAF 237
> tpv:TP03_0830 ATP-dependent RNA helicase
Length=707
Score = 93.6 bits (231), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 0/109 (0%)
Query 7 LSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEHT 66
+S +DW + ELV +K+FY E P EE +RI H I I +PKP TF+
Sbjct 265 VSSIDWDKEELVEIKKDFYDLSYEADSRPGEEIERILKAHNIIIEGEHPLPKPVTTFDEA 324
Query 67 SFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAF 115
F + + I + F +PTPIQ GW L+GRD+IG+++TGSGKTL F
Sbjct 325 VFNQQIQNIIKESNFTEPTPIQKVGWTSCLTGRDIIGVSQTGSGKTLTF 373
> cel:F53H1.1 hypothetical protein; K12811 ATP-dependent RNA helicase
DDX46/PRP5 [EC:3.6.4.13]
Length=970
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 0/113 (0%)
Query 4 GAKLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTF 63
G L++ D +V F+KNFY+E EI +M E R + + + G++ PKP T+
Sbjct 247 GRMLAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTW 306
Query 64 EHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
+++ + + KPT IQ Q P +SGRD+IGIA+TGSGKTLAFL
Sbjct 307 AQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFL 359
> cel:C46F11.4 hypothetical protein; K12835 ATP-dependent RNA
helicase DDX42 [EC:3.6.4.13]
Length=811
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Query 10 VDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITI-IAGVNVPKPCPTFEHTSF 68
+D +++ F KNFY EH +I ++ D IR + + + + G+ P+P +F H SF
Sbjct 215 IDHSQIQYQKFNKNFYEEHEDIKRL--HYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSF 272
Query 69 PSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
L++AI + +++PTPIQ P ALSGRD++GIA+TGSGKT A+L
Sbjct 273 DKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYL 320
> ath:AT2G47330 DEAD/DEAH box helicase, putative; K12835 ATP-dependent
RNA helicase DDX42 [EC:3.6.4.13]
Length=760
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query 7 LSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEHT 66
++ +D ++ P K+FY E I+ M +E R I + +G +V +P TFE
Sbjct 175 ITALDHSSIDYEPINKDFYEELESISGMTEQETTDYRQRLGIRV-SGFDVHRPVKTFEDC 233
Query 67 SFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
F S ++ AI ++KPT IQ Q PI LSGRD+IGIA+TGSGKT AF+
Sbjct 234 GFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFV 283
> pfa:PFE0430w ATP-dependent RNA Helicase, putative; K12811 ATP-dependent
RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1490
Score = 89.4 bits (220), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 0/116 (0%)
Query 1 EELGAKLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPC 60
+++ KL V+ ++ +P +KN YV+ EI M + D R ++ I+ G N P+P
Sbjct 663 KKMNKKLLEVNHDEIDYIPIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPV 722
Query 61 PTFEHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
F PS +L + F+K IQ+Q P + GRD+I IAETGSGKTL++L
Sbjct 723 QYFYQCGLPSKILQILEKKNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKTLSYL 778
> cel:F58E10.3 hypothetical protein; K12823 ATP-dependent RNA
helicase DDX5/DBP2 [EC:3.6.4.13]
Length=561
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query 7 LSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEHT 66
L VDW L P EK+FY E+ +++ E D+ + +++T+ G VP+P F
Sbjct 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTL-EGRGVPRPVFEFNEA 135
Query 67 SFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
P + + + FQKPT IQ WPIA+SGRD+I IA+TGSGKTLAF+
Sbjct 136 PLPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFM 184
> hsa:55510 DDX43, CT13, DKFZp434H2114, HAGE; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 43 (EC:3.6.4.13)
Length=648
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query 2 ELGAKLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDH-EIT---IIAGVNVP 57
E G K + W +L P +KNFY E + M EAD R ++ IT + G P
Sbjct 178 EEGLKWQKTKW--ADLPPIKKNFYKESTATSAMSKVEADSWRKENFNITWDDLKDGEKRP 235
Query 58 KPCPTFE-HTSFPSY--LLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLA 114
P PT +F Y +++ I AGFQKPTPIQ Q WPI L G D+IG+A+TG+GKTL
Sbjct 236 IPNPTCTFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLC 295
Query 115 FL 116
+L
Sbjct 296 YL 297
> ath:AT3G01540 DRH1; DRH1 (DEAD BOX RNA HELICASE 1); ATP-dependent
RNA helicase/ ATPase
Length=619
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Query 32 AQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEHTSFPSYLLDAISAAGFQKPTPIQLQG 91
+++ PE R HEIT+ +G VP P +FE T FP LL + +AGF PTPIQ Q
Sbjct 133 SELSPEAYSR---RHEITV-SGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQS 188
Query 92 WPIALSGRDMIGIAETGSGKTLAFL 116
WPIA+ GRD++ IA+TGSGKTL +L
Sbjct 189 WPIAMQGRDIVAIAKTGSGKTLGYL 213
> bbo:BBOV_I004920 19.m02284; DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein (EC:3.6.1.-);
K12811 ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=994
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 0/108 (0%)
Query 9 RVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEHTSF 68
+VD ++ PF+KNFYV+ I M E + R + + G P+P F
Sbjct 336 KVDHSTIDYQPFKKNFYVQISAITAMKEHEVEAFRKANGNIRVRGKYCPRPIYNFSQCGL 395
Query 69 PSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
P +L + ++KP PIQ+Q P + GRD++ IAETGSGKT+A+L
Sbjct 396 PDPILSLLQRRNYEKPFPIQMQCIPALMCGRDVLAIAETGSGKTMAYL 443
> mmu:100048658 Ddx43, OTTMUSG00000019690; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 43 (EC:3.6.4.13)
Length=646
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 68/118 (57%), Gaps = 12/118 (10%)
Query 10 VDWQR---VELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVN------VPKPC 60
+ W++ +L P +KNFY+E + M + D R ++ + +P P
Sbjct 179 LKWEKKKWADLPPIKKNFYIESATTSSMSQVQIDNWRKENFNITCDDLKDGEKRPIPNPI 238
Query 61 PTFEHTSFPSY--LLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
FE +F SY +++ I AGFQKPTPIQ Q WPI L G D+IG+A+TG+GKTL++L
Sbjct 239 CKFED-AFQSYPEVMENIKRAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLSYL 295
> ath:AT3G06480 DEAD box RNA helicase, putative
Length=1088
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query 25 YVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEHTSFPSYLLDAISAAGFQKP 84
+V P++ + P E R HE+T G N+P P TFE + P +L + +AGF P
Sbjct 402 FVTSPDVPHLSPVEI--YRKQHEVTT-TGENIPAPYITFESSGLPPEILRELLSAGFPSP 458
Query 85 TPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
TPIQ Q WPIAL RD++ IA+TGSGKTL +L
Sbjct 459 TPIQAQTWPIALQSRDIVAIAKTGSGKTLGYL 490
> dre:100136871 ddx43, zgc:174910; DEAD (Asp-Glu-Ala-Asp) box
polypeptide 43
Length=405
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 11/119 (9%)
Query 6 KLSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVN------VPKP 59
K + WQ +L +KNFY+E +A EE R ++ + + +P P
Sbjct 218 KYEAMKWQ--DLPVLKKNFYIEAKSVAARSAEEVKIWRKENNNIFVDDLKDGDKRTIPNP 275
Query 60 CPTFEHTSFPSY--LLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
TFE +F Y +++ I GF+KPTPIQ Q WP+ L+G D+IGIA+TG+GKTLA+L
Sbjct 276 VCTFEE-AFAHYPGIMENIVRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTLAYL 333
> tgo:TGME49_021650 ATP-dependent RNA helicase, putative (EC:3.1.3.69
3.4.21.72); K12811 ATP-dependent RNA helicase DDX46/PRP5
[EC:3.6.4.13]
Length=1544
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Query 2 ELGAK--LSRVDWQRVELVPFEKNFYVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKP 59
++GAK L VD + P +KN Y++ EI M E D +R H + G P+P
Sbjct 912 KVGAKKQLPTVDHEASAYPPIKKNLYIQVKEITCMKDHEVDALRKTHGNIKVRGKQCPRP 971
Query 60 CPTFEHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAF 115
TF P ++ ++ G +P PIQ+Q P + GRD+I +AETGSGKTLA+
Sbjct 972 ITTFFQCGLPDKIVKYLTLRGITEPFPIQMQAIPCLMCGRDVIAVAETGSGKTLAY 1027
> ath:AT5G51280 DEAD-box protein abstrakt, putative; K13116 ATP-dependent
RNA helicase DDX41 [EC:3.6.4.13]
Length=591
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query 31 IAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEHTSFPSYLLDAISAAGFQKPTPIQLQ 90
I +M ++ D IR I I+ G ++P P F+ FP +LD + G +PTPIQ+Q
Sbjct 117 IRKMSSKQRDLIRKQWHI-IVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQ 175
Query 91 GWPIALSGRDMIGIAETGSGKTLAFL 116
G P+ L+GRDMIGIA TGSGKTL F+
Sbjct 176 GLPVILAGRDMIGIAFTGSGKTLVFV 201
> ath:AT4G33370 DEAD-box protein abstrakt, putative
Length=542
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query 31 IAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEHTSFPSYLLDAISAAGFQKPTPIQLQ 90
+ +M ++ D IR IT+ G ++P P F FPS LL + G PTPIQ+Q
Sbjct 68 VRKMSTKQMDLIRKQWHITV-NGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQ 126
Query 91 GWPIALSGRDMIGIAETGSGKTLAFL 116
G P+ LSGRDMIGIA TGSGKTL F+
Sbjct 127 GLPVVLSGRDMIGIAFTGSGKTLVFV 152
> pfa:PFE0925c snrnp protein, putative; K12858 ATP-dependent RNA
helicase DDX23/PRP28 [EC:3.6.4.13]
Length=1123
Score = 81.6 bits (200), Expect = 5e-16, Method: Composition-based stats.
Identities = 45/84 (53%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Query 37 EEADR----IRTDHEITIIAGVNVPKPCPTFEHTSFPSYLLDAISAAGFQKPTPIQLQGW 92
E DR R D+EI I GV VP P +E ++ + LL AI A ++KPTPIQ+Q
Sbjct 671 EMTDRDWRIFREDNEIYIKGGV-VPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAI 729
Query 93 PIALSGRDMIGIAETGSGKTLAFL 116
PIAL RD+IGIAETGSGKT AF+
Sbjct 730 PIALEMRDLIGIAETGSGKTAAFV 753
> hsa:51428 DDX41, ABS, MGC8828; DEAD (Asp-Glu-Ala-Asp) box polypeptide
41 (EC:3.6.4.13); K13116 ATP-dependent RNA helicase
DDX41 [EC:3.6.4.13]
Length=622
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query 31 IAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEHTSFPSYLLDAISAAGFQKPTPIQLQ 90
+ M E +R+R + I ++ G +P P +F+ FP+ +L + G PTPIQ+Q
Sbjct 152 VLSMSEERHERVRKKYHI-LVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQ 210
Query 91 GWPIALSGRDMIGIAETGSGKTLAF 115
G P LSGRDMIGIA TGSGKTL F
Sbjct 211 GIPTILSGRDMIGIAFTGSGKTLVF 235
> dre:562123 ddx59, si:dkey-39e8.2; DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59 (EC:3.6.4.13)
Length=584
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Query 22 KNF-YVEHPEIAQMPPEEADRIRTDHEITIIAGVNVPKPCPTFEHTSFPSYLLDAISAAG 80
KN+ Y E I+++ E+ +R++ + I + G V +P F+H FP+ L + AG
Sbjct 131 KNYCYKEDTFISELTEEQIERVKAELGI-VSVGTEVCRPVIEFQHCRFPTVLEKNLKVAG 189
Query 81 FQKPTPIQLQGWPIALSGRDMIGIAETGSGKTLAFL 116
++ PTP+Q+Q P+ L+GRD+I A+TGSGKT+AFL
Sbjct 190 YEAPTPVQMQMVPVGLTGRDVIATADTGSGKTVAFL 225
> bbo:BBOV_II003280 18.m06276; DEAD box RNA helicase; K12858 ATP-dependent
RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=714
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query 43 RTDHEITIIAGVNVPKPCPTFEHTSFPSYLLDAISAAGFQKPTPIQLQGWPIALSGRDMI 102
R D +I + G VP P T+ ++ PS LL AI AGF+ PTPIQ+Q PI L RD+I
Sbjct 280 REDFDI-YVKGTRVPPPMRTWAESNLPSELLRAIKDAGFKSPTPIQMQAIPIGLGMRDLI 338
Query 103 GIAETGSGKTLAFL 116
G+AETGSGKT+AF+
Sbjct 339 GLAETGSGKTVAFV 352
Lambda K H
0.318 0.137 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2037741960
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40