bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_0949_orf1
Length=225
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_090850 WD-40 repeat protein, putative ; K13111 WD40... 263 4e-70
cel:CC4.3 smu-1; Suppressor of Mec and Unc defects family memb... 216 4e-56
dre:393168 smu1, MGC56147, zgc:56147; smu-1 suppressor of mec-... 215 8e-56
mmu:74255 Smu1, 2600001O03Rik, 2610203K23Rik, AB044414, AI8450... 211 2e-54
hsa:55234 SMU1, BWD, DKFZp761L0916, FLJ10805, FLJ10870, FLJ119... 211 2e-54
ath:AT1G73720 transducin family protein / WD-40 repeat family ... 209 5e-54
xla:431914 smu1, MGC81475; smu-1 suppressor of mec-8 and unc-5... 208 1e-53
tpv:TP01_0202 hypothetical protein; K13111 WD40 repeat-contain... 205 1e-52
dre:570074 WD40 repeat-containing protein SMU1-like; K13111 WD... 199 7e-51
bbo:BBOV_IV005340 23.m06217; WD domain, G-beta repeat containi... 197 2e-50
pfa:MAL13P1.54 conserved Plasmodium protein, unknown function;... 164 3e-40
cpv:cgd3_3070 WD-40 repeat protein, SMART LisH domain 63.5 6e-10
ath:AT5G08560 transducin family protein / WD-40 repeat family ... 45.1 2e-04
ath:AT1G80490 TPR1; TPR1 (TOPLESS-RELATED 1) 40.8 0.003
ath:AT1G15750 TPL; TPL (TOPLESS); protein binding / protein ho... 40.0 0.006
hsa:90665 TBL1Y, TBL1; transducin (beta)-like 1, Y-linked; K04... 38.5 0.022
dre:393827 wdr61, MGC77675, zgc:77675; WD repeat domain 61; K1... 38.1 0.028
xla:444484 wdr61, MGC81859; WD repeat domain 61; K12602 WD rep... 37.7 0.030
mmu:66317 Wdr61, 2700038L12Rik, 2810418I05Rik, REC14; WD repea... 37.7 0.032
hsa:80349 WDR61, REC14, SKI8; WD repeat domain 61; K12602 WD r... 37.7 0.035
mmu:81004 Tbl1xr1, 8030499H02Rik, A630076E03Rik, AW539987, C21... 37.7 0.036
xla:398608 tbl1xr1-a, TBLR1; transducin (beta)-like 1 X-linked... 37.4 0.038
xla:779369 tbl1xr1-b, MGC80502, TBLR1; transducin (beta)-like ... 37.4 0.039
hsa:79718 TBL1XR1, C21, DC42, FLJ12894, IRA1, TBLR1; transduci... 37.4 0.040
mmu:76646 Wdr38, 1700123D08Rik; WD repeat domain 38 37.4
hsa:6907 TBL1X, EBI, SMAP55, TBL1; transducin (beta)-like 1X-l... 36.6 0.074
xla:444069 wdr70, MGC82743; WD repeat domain 70 36.2
mmu:21372 Tbl1x, 5330429M20, Tbl1; transducin (beta)-like 1 X-... 36.2 0.092
ath:AT1G48870 WD-40 repeat family protein 36.2 0.10
cel:T05H4.14 gad-1; GAstrulation Defective family member (gad-1) 35.8 0.12
dre:792625 WD repeat domain 70-like 35.4 0.14
dre:406291 katnb1, wu:fj32f02, wu:fj65h01, zgc:56071; katanin ... 35.4 0.15
cel:K04G11.4 hypothetical protein 35.4 0.16
ath:AT5G24320 WD-40 repeat family protein 35.4 0.17
xla:398044 cdc20, X-FZY; cell division cycle 20 homolog; K0336... 35.4 0.17
xla:379130 cdc20; cell division cycle 20 homolog; K03363 cell ... 35.4 0.18
dre:100007282 autophagy related 16 like 2-like 35.0 0.20
sce:YBL008W HIR1; Hir1p; K11293 protein HIRA/HIR1 35.0 0.22
bbo:BBOV_II003290 18.m06277; WD domain, G-beta repeat containi... 35.0 0.22
tgo:TGME49_058530 WD domain, G-beta repeat-containing protein 34.7 0.24
dre:560294 tbl1x, MGC158242, zgc:158242; transducin (beta)-lik... 34.7 0.24
tgo:TGME49_120210 WD-40 repeat protein, putative ; K10599 pre-... 34.7 0.27
ath:AT5G25150 TAF5; TAF5 (TBP-ASSOCIATED FACTOR 5); nucleotide... 34.7 0.28
ath:AT1G64610 WD-40 repeat family protein 34.7 0.28
dre:571996 WD repeat domain 20-like 34.7 0.30
mmu:234699 Edc4, BC022641; enhancer of mRNA decapping 4; K1261... 34.7 0.30
ath:AT5G42010 WD-40 repeat family protein 34.3 0.33
bbo:BBOV_IV008010 23.m06565; hypothetical protein 34.3 0.37
dre:266990 pwp2h, cb471, zgc:56063; PWP2 periodic tryptophan p... 34.3 0.37
ath:AT4G05410 transducin family protein / WD-40 repeat family ... 34.3 0.39
> tgo:TGME49_090850 WD-40 repeat protein, putative ; K13111 WD40
repeat-containing protein SMU1
Length=521
Score = 263 bits (672), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 135/225 (60%), Positives = 171/225 (76%), Gaps = 0/225 (0%)
Query 1 QFLAESNLPRTVQMLQEESGVCLNSVESVDKFVRDVHHGRWDEVLRVTATTSLSEETQQQ 60
QFL ESNL RT+Q+LQEE+GV LNSVESV++F DV GRWD VL+ + L +ET
Sbjct 18 QFLQESNLTRTLQVLQEETGVYLNSVESVEEFASDVQQGRWDTVLQTVSHCKLQDETLHL 77
Query 61 LYEQVFYEMLELRETELARLLLRETAVLQQLRQQNPEHFKRLDTLANRPFFDAREVYQGT 120
LYEQV EMLELRE ELAR LLRET+V Q R PE FKRL+ L N+PFFD ++VY+ +
Sbjct 78 LYEQVLCEMLELREVELARCLLRETSVFNQYRLHYPEKFKRLELLCNKPFFDPKDVYEHS 137
Query 121 PKEKRRAALAQALALGLDCVPSSRLLSLIGMALNYQKHKGILPSTSEFNLYSNATRRPKE 180
K++RRAA+AQA+A L VPSSRLL+L+GM+L YQK KG+LP+ +F+L+ NA KE
Sbjct 138 TKDRRRAAIAQAIANELQSVPSSRLLTLLGMSLKYQKQKGMLPAGEKFDLFLNAASTGKE 197
Query 181 AKELYPQDVAKSIRFTNKSHPECAAFSPDGRYLASGLIDGFIEIW 225
+E +P +AK+I+F +KSHPECAAFSPDG +L SG IDGF+E+W
Sbjct 198 GREEFPVAIAKTIKFGSKSHPECAAFSPDGHHLVSGSIDGFVEVW 242
> cel:CC4.3 smu-1; Suppressor of Mec and Unc defects family member
(smu-1); K13111 WD40 repeat-containing protein SMU1
Length=510
Score = 216 bits (551), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 149/225 (66%), Gaps = 0/225 (0%)
Query 1 QFLAESNLPRTVQMLQEESGVCLNSVESVDKFVRDVHHGRWDEVLRVTATTSLSEETQQQ 60
QFL ESNL RT+ +LQEE+ V LN+V+S+D F ++ G WD VL+ + L +
Sbjct 17 QFLKESNLHRTLAILQEETNVSLNTVDSIDGFCNEITSGNWDNVLKTVQSLKLPAKKLID 76
Query 61 LYEQVFYEMLELRETELARLLLRETAVLQQLRQQNPEHFKRLDTLANRPFFDAREVYQGT 120
LYE V E++ELRE ARL+ R+T + L+Q +P+ F RL++L NRP+FD +EVY
Sbjct 77 LYEHVIIELVELRELATARLVARQTDPMILLKQIDPDRFARLESLINRPYFDGQEVYGDV 136
Query 121 PKEKRRAALAQALALGLDCVPSSRLLSLIGMALNYQKHKGILPSTSEFNLYSNATRRPKE 180
KEKRR+ +AQ L+ + V SRLLSL+G +L +Q H+G+LP + +L+ + ++
Sbjct 137 SKEKRRSVIAQTLSSEVHVVAPSRLLSLLGQSLKWQLHQGLLPPGTAIDLFRGKAAQKEQ 196
Query 181 AKELYPQDVAKSIRFTNKSHPECAAFSPDGRYLASGLIDGFIEIW 225
+E YP +A+SI+F+ KS+PE A FSPD YL SG DGFIE+W
Sbjct 197 IEERYPTMMARSIKFSTKSYPESAVFSPDANYLVSGSKDGFIEVW 241
> dre:393168 smu1, MGC56147, zgc:56147; smu-1 suppressor of mec-8
and unc-52 homolog (C. elegans); K13111 WD40 repeat-containing
protein SMU1
Length=513
Score = 215 bits (548), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 106/226 (46%), Positives = 151/226 (66%), Gaps = 1/226 (0%)
Query 1 QFLAESNLPRTVQMLQEESGVCLNSVESVDKFVRDVHHGRWDEVLRVTATTSLSEETQQQ 60
Q+L E++L RT+ MLQEE+ V LN+V+S++ FV D++ G WD VL+ + L ++T
Sbjct 16 QYLKENSLHRTLAMLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQSLKLPDKTLID 75
Query 61 LYEQVFYEMLELRETELARLLLRETAVLQQLRQQNPEHFKRLDTLANRPFFDAREVY-QG 119
LYEQV E++ELRE AR LLR+T + L+Q PE + L+ L R +FD RE Y G
Sbjct 76 LYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENLLARSYFDPREAYPDG 135
Query 120 TPKEKRRAALAQALALGLDCVPSSRLLSLIGMALNYQKHKGILPSTSEFNLYSNATRRPK 179
+ KEKRRAA+AQALA + VP SRL++L+G +L +Q+H+G+LP +L+
Sbjct 136 SSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPPGMTIDLFRGKAAVKD 195
Query 180 EAKELYPQDVAKSIRFTNKSHPECAAFSPDGRYLASGLIDGFIEIW 225
+E +P +A+ I+F KSH ECA FSPDG+YL +G +DGFIE+W
Sbjct 196 VEEERFPTQLARHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVW 241
> mmu:74255 Smu1, 2600001O03Rik, 2610203K23Rik, AB044414, AI845086,
AW556129, Bwd; smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans); K13111 WD40 repeat-containing protein SMU1
Length=513
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/226 (46%), Positives = 149/226 (65%), Gaps = 1/226 (0%)
Query 1 QFLAESNLPRTVQMLQEESGVCLNSVESVDKFVRDVHHGRWDEVLRVTATTSLSEETQQQ 60
Q+L E++L R + LQEE+ V LN+V+S++ FV D++ G WD VL+ + L ++T
Sbjct 16 QYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQSLKLPDKTLID 75
Query 61 LYEQVFYEMLELRETELARLLLRETAVLQQLRQQNPEHFKRLDTLANRPFFDAREVY-QG 119
LYEQV E++ELRE AR LLR+T + L+Q PE + L+ L R +FD RE Y G
Sbjct 76 LYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENLLARSYFDPREAYPDG 135
Query 120 TPKEKRRAALAQALALGLDCVPSSRLLSLIGMALNYQKHKGILPSTSEFNLYSNATRRPK 179
+ KEKRRAA+AQALA + VP SRL++L+G AL +Q+H+G+LP +L+
Sbjct 136 SSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPPGMTIDLFRGKAAVKD 195
Query 180 EAKELYPQDVAKSIRFTNKSHPECAAFSPDGRYLASGLIDGFIEIW 225
+E +P +++ I+F KSH ECA FSPDG+YL +G +DGFIE+W
Sbjct 196 VEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVW 241
> hsa:55234 SMU1, BWD, DKFZp761L0916, FLJ10805, FLJ10870, FLJ11970,
MGC117363, RP11-54K16.3, SMU-1, fSAP57; smu-1 suppressor
of mec-8 and unc-52 homolog (C. elegans); K13111 WD40 repeat-containing
protein SMU1
Length=513
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/226 (46%), Positives = 149/226 (65%), Gaps = 1/226 (0%)
Query 1 QFLAESNLPRTVQMLQEESGVCLNSVESVDKFVRDVHHGRWDEVLRVTATTSLSEETQQQ 60
Q+L E++L R + LQEE+ V LN+V+S++ FV D++ G WD VL+ + L ++T
Sbjct 16 QYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQSLKLPDKTLID 75
Query 61 LYEQVFYEMLELRETELARLLLRETAVLQQLRQQNPEHFKRLDTLANRPFFDAREVY-QG 119
LYEQV E++ELRE AR LLR+T + L+Q PE + L+ L R +FD RE Y G
Sbjct 76 LYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENLLARSYFDPREAYPDG 135
Query 120 TPKEKRRAALAQALALGLDCVPSSRLLSLIGMALNYQKHKGILPSTSEFNLYSNATRRPK 179
+ KEKRRAA+AQALA + VP SRL++L+G AL +Q+H+G+LP +L+
Sbjct 136 SSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPPGMTIDLFRGKAAVKD 195
Query 180 EAKELYPQDVAKSIRFTNKSHPECAAFSPDGRYLASGLIDGFIEIW 225
+E +P +++ I+F KSH ECA FSPDG+YL +G +DGFIE+W
Sbjct 196 VEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVW 241
> ath:AT1G73720 transducin family protein / WD-40 repeat family
protein; K13111 WD40 repeat-containing protein SMU1
Length=511
Score = 209 bits (533), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 149/225 (66%), Gaps = 0/225 (0%)
Query 1 QFLAESNLPRTVQMLQEESGVCLNSVESVDKFVRDVHHGRWDEVLRVTATTSLSEETQQQ 60
QF E++L +T Q LQ E V LN+V+SV+ F+ D++ GRWD VL + L +
Sbjct 16 QFCKENSLNQTFQTLQSECQVSLNTVDSVETFISDINSGRWDSVLPQVSQLKLPRNKLED 75
Query 61 LYEQVFYEMLELRETELARLLLRETAVLQQLRQQNPEHFKRLDTLANRPFFDAREVYQGT 120
LYEQ+ EM+ELRE + AR +LR+T V+ ++Q+ E + R++ L R +FD E Y +
Sbjct 76 LYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQAERYLRMEHLLVRSYFDPHEAYGDS 135
Query 121 PKEKRRAALAQALALGLDCVPSSRLLSLIGMALNYQKHKGILPSTSEFNLYSNATRRPKE 180
KE++RA +AQA+A + VP SRL++LIG AL +Q+H+G+LP ++F+L+ ++
Sbjct 136 TKERKRAQIAQAVAAEVTVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTAAMKQD 195
Query 181 AKELYPQDVAKSIRFTNKSHPECAAFSPDGRYLASGLIDGFIEIW 225
++ +P + +I+F KSH ECA FSPDG++LAS +DGFIE+W
Sbjct 196 VEDTHPNVLTHTIKFGKKSHAECARFSPDGQFLASSSVDGFIEVW 240
> xla:431914 smu1, MGC81475; smu-1 suppressor of mec-8 and unc-52
homolog; K13111 WD40 repeat-containing protein SMU1
Length=513
Score = 208 bits (530), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/226 (45%), Positives = 148/226 (65%), Gaps = 1/226 (0%)
Query 1 QFLAESNLPRTVQMLQEESGVCLNSVESVDKFVRDVHHGRWDEVLRVTATTSLSEETQQQ 60
Q+L E++L RT+ LQEE+ V LN+V+S++ FV D++ G WD VL+ + L ++T
Sbjct 16 QYLKENSLHRTLATLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQSLKLPDKTLID 75
Query 61 LYEQVFYEMLELRETELARLLLRETAVLQQLRQQNPEHFKRLDTLANRPFFDAREVY-QG 119
LYEQV E++ELRE AR LLR+T + L+Q E + L+ L R +FD RE Y G
Sbjct 76 LYEQVVLELIELRELGAARSLLRQTDPMIMLKQNQSERYIHLENLLARSYFDPREAYPDG 135
Query 120 TPKEKRRAALAQALALGLDCVPSSRLLSLIGMALNYQKHKGILPSTSEFNLYSNATRRPK 179
+ KEKRR A+AQALA + VP SRL++L+G AL +Q+H+G+LP +L+
Sbjct 136 SSKEKRRTAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPPGMTIDLFRGKAAVKD 195
Query 180 EAKELYPQDVAKSIRFTNKSHPECAAFSPDGRYLASGLIDGFIEIW 225
+E +P +++ I+F KSH ECA FSPDG+YL +G +DGFIE+W
Sbjct 196 VEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVW 241
> tpv:TP01_0202 hypothetical protein; K13111 WD40 repeat-containing
protein SMU1
Length=526
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 158/235 (67%), Gaps = 12/235 (5%)
Query 1 QFLAESNLPRTVQMLQEESGVCLNSVESVDKFVRDVHHGRWDEVLRVTATTSLSEETQQQ 60
Q+L E+NL +T+ M+QEE+GV LNSV +++ + D GRW +VL T LS++T +
Sbjct 18 QYLKENNLKKTLLMMQEETGVSLNSVSNLEVLISDAQMGRWSQVLETIDTMKLSQDTLFK 77
Query 61 LYEQVFYEMLELRETELARLLLRETAVLQQLRQQNPEHFKRLDTLA-NRPFFDAREVYQG 119
LY+Q+ E+++L+ET+LA LL+ A L +++ +P++++RL L NRP D++E+Y G
Sbjct 78 LYDQIVRELVDLKETKLALLLMENCAPLVSMQKSDPDNYRRLLELCKNRP-SDSKEIYAG 136
Query 120 TP---------KEKRRAALAQALALGLDCVPSSRLLSLIGMALNYQKHKGILPSTSEFNL 170
KE++R +A+AL+ ++ VP SRLL+L+GMAL +Q H GILP +F++
Sbjct 137 ISTDASHHHLTKERKRNIVAEALSKDIEHVPQSRLLALLGMALKWQNHVGILPPGEKFDV 196
Query 171 YSNATRRPKEAKELYPQDVAKSIRFTNKSHPECAAFSPDGRYLASGLIDGFIEIW 225
+ N ++ EA E Y ++++K I+F SHPEC F+P+G+YL SG DGFIE+W
Sbjct 197 FKNISKMSDEAPE-YVKNISKIIKFAENSHPECVVFTPNGQYLISGSSDGFIEVW 250
> dre:570074 WD40 repeat-containing protein SMU1-like; K13111
WD40 repeat-containing protein SMU1
Length=513
Score = 199 bits (506), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 147/226 (65%), Gaps = 1/226 (0%)
Query 1 QFLAESNLPRTVQMLQEESGVCLNSVESVDKFVRDVHHGRWDEVLRVTATTSLSEETQQQ 60
Q+L E+NL RT+ MLQEE+ V L++V+S+D F+ D+++G+WD VL L ++
Sbjct 16 QYLKENNLHRTLAMLQEETTVSLHTVDSIDSFISDINNGQWDIVLLAIQYLKLPDKLLID 75
Query 61 LYEQVFYEMLELRETELARLLLRETAVLQQLRQQNPEHFKRLDTLANRPFFDAREVYQ-G 119
LYEQ+ E++EL E A+ LL++T + L+ PE + R++TL P+FD+++ Y G
Sbjct 76 LYEQIVLELIELGELGAAQCLLKQTDPMIMLKHTQPERYSRMETLLTHPYFDSQKAYPVG 135
Query 120 TPKEKRRAALAQALALGLDCVPSSRLLSLIGMALNYQKHKGILPSTSEFNLYSNATRRPK 179
+ KEKRR A+AQA A + VP SRL+ L+G +L +Q+H+G+LP L+
Sbjct 136 SSKEKRRLAIAQAFAGEVCLVPPSRLMGLLGQSLKWQQHQGLLPPGMSLELFRGKGALKD 195
Query 180 EAKELYPQDVAKSIRFTNKSHPECAAFSPDGRYLASGLIDGFIEIW 225
+E +P +++ I+F KSH ECA FSPDG+YL +G +DGFIE+W
Sbjct 196 MEEERFPTQLSRLIKFGPKSHVECARFSPDGQYLITGSVDGFIEVW 241
> bbo:BBOV_IV005340 23.m06217; WD domain, G-beta repeat containing
protein; K13111 WD40 repeat-containing protein SMU1
Length=533
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 147/235 (62%), Gaps = 10/235 (4%)
Query 1 QFLAESNLPRTVQMLQEESGVCLNSVESVDKFVRDVHHGRWDEVLRVTATTSLSEETQQQ 60
Q+L E+ L +++ MLQEESG+ L V SVD + DVH GRW+ VL V T LS+ T +
Sbjct 18 QYLKENKLNKSLMMLQEESGISLKCVPSVDSLIADVHMGRWNRVLDVVDTMRLSQGTLFK 77
Query 61 LYEQVFYEMLELRETELARLLLRETAVLQQLRQQNPEHFKRLDTLANRPFFDAREVY--- 117
LY+Q+ E+++LRE +A +L +++++ + PE ++ L+ + + + RE+Y
Sbjct 78 LYDQIIRELVDLREGTIAMAVLENAIPIREMQLEAPETYRNLEGICKKRPAETREIYAAA 137
Query 118 -------QGTPKEKRRAALAQALALGLDCVPSSRLLSLIGMALNYQKHKGILPSTSEFNL 170
Q K+KRRA +A+AL +D VP SRL++L+GMA+ +Q++ GI+ + +F+L
Sbjct 138 TSDSGGQQSLTKDKRRALVAEALKDEIDSVPPSRLVALLGMAMKWQQNVGIISDSGQFDL 197
Query 171 YSNATRRPKEAKELYPQDVAKSIRFTNKSHPECAAFSPDGRYLASGLIDGFIEIW 225
+ N + + EL +DV K IRF SHPEC F+P G+YL SG DGFIE+W
Sbjct 198 FRNTSTSSSKGDELCVKDVGKIIRFAESSHPECVVFTPSGQYLISGSSDGFIEVW 252
> pfa:MAL13P1.54 conserved Plasmodium protein, unknown function;
K13111 WD40 repeat-containing protein SMU1
Length=527
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 131/227 (57%), Gaps = 2/227 (0%)
Query 1 QFLAESNLPRTVQMLQEESGVCLNSVESVDKFVRDVHHGRWDEVLRVTATTSLSEETQQQ 60
Q+L E+NL R+ +LQEES + LN++ +VDK +RD++ G W VL T LS+ET
Sbjct 20 QYLKENNLIRSFYVLQEESNIKLNAISNVDKLIRDINKGDWKNVLFNITTIDLSDETLMC 79
Query 61 LYEQVFYEMLELRETELARLLLRETAVLQQLRQQNPEHFKRLDTLANRPFFDAREVYQGT 120
YEQ+ E++E E ELA ++ E + +++ ++ + + +L + N + +Y G
Sbjct 80 FYEQLICELVEYNEKELAEKIMDECIIFKRMEKKYNDKYNKLIEIMNSKHINKNILYDGL 139
Query 121 PKEKRRAALAQALALGLDCVPSSRLLSLIGMALNYQKHKGILPSTSE--FNLYSNATRRP 178
K+++R L + + SRLL+LIGMAL +Q H I+ + + F+++ N +
Sbjct 140 TKDEKRNHLCNMITNEITTCAPSRLLALIGMALKWQAHHNIIKNKKDGYFDIFRNIEKDI 199
Query 179 KEAKELYPQDVAKSIRFTNKSHPECAAFSPDGRYLASGLIDGFIEIW 225
++YP+ + KSI+F +S+ EC S + YL +G DGFIEIW
Sbjct 200 INTIDVYPEKILKSIKFGKESNVECCISSYNNDYLITGSSDGFIEIW 246
> cpv:cgd3_3070 WD-40 repeat protein, SMART LisH domain
Length=595
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 21/176 (11%)
Query 1 QFLAESNLPRTVQMLQEESGVCLNSVESVDKFVRDVHHGRWDEVLRVTATTSLSEETQQQ 60
QFL ES L + L ESGV LN +ESVD+ + G W+E++ V + Q
Sbjct 17 QFLLESGLLESYSTLSYESGVSLNWIESVDEIRTIISKGHWNELIEVLKYIKIPANLQII 76
Query 61 LYEQVFYEMLELRETELARLLLRETAVLQQLRQQNPEHFKRL--------DTLANRP--- 109
L+E + E+LEL+E +A+ L+ L L Q E + L + ++N
Sbjct 77 LFEHIALELLELKEPFVAQYLIENNKSL-FLHNQFDEKYNTLLEIIEKSKNIISNVKNNS 135
Query 110 ---------FFDAREVYQGTPKEKRRAALAQALALGLDCVPSSRLLSLIGMALNYQ 156
F +G KEK R L++ + V S LL +IG +L Y+
Sbjct 136 VELNYSSILTFVKNSYLEGESKEKSRERLSKLITENFIEVRKSLLLEVIGDSLKYK 191
> ath:AT5G08560 transducin family protein / WD-40 repeat family
protein
Length=589
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 25/230 (10%)
Query 10 RTVQMLQEESGVCLNSVESVDKFVRDVHHGRWDEVLRVTATTSLSEETQQQ-----LYEQ 64
+T ML+EESG+ L++ ++ F++ V G+WD+ ++ +E + L EQ
Sbjct 83 KTGAMLEEESGISLHN-STIKLFLQQVKDGKWDQSVKTLHRIGFPDEKAVKAASFLLLEQ 141
Query 65 VFYEMLELRETELA-RLLLRETAVLQQLRQQNPEHFKRLDTLANRPFFDAREVYQGTPKE 123
F E L++ + A R L E A L+ ++ E L ++ F G
Sbjct 142 KFLEFLKVEKIADALRTLRNEMAPLRINTKRVHELASSL--ISPSSFISHTTSTPGKESV 199
Query 124 KRRAALAQALALGLDC---VPSSRLLSLIGMALNYQKHKGILPST--SEFNLYSNATRRP 178
R+ + + L L +P RL L+ +L+ Q+ + +T S+ +LYS+
Sbjct 200 NSRSKVLEELQTLLPASVIIPEKRLECLVENSLHIQRDSCVFHNTLDSDLSLYSDH---- 255
Query 179 KEAKELYPQDVAKSIRFTNKSHPECA---AFSPDGRYLASGLIDGFIEIW 225
+ K P A+ + +SH + FS +G+YLAS D IW
Sbjct 256 QCGKHQIPSQTAQIL----ESHTDEVWFLQFSHNGKYLASSSKDQTAIIW 301
> ath:AT1G80490 TPR1; TPR1 (TOPLESS-RELATED 1)
Length=1119
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 92/210 (43%), Gaps = 32/210 (15%)
Query 1 QFLAESNLPRTVQMLQEESGVCLNSVESVDKFVRDVHHGRWDEVLRVTATTSLSEETQQQ 60
QFL E TV L++ESG N + F +VH+G WDEV + + + ++ +
Sbjct 14 QFLDEEKFKETVHKLEQESGFFFN----MKYFEDEVHNGNWDEVEKYLSGFTKVDDNRYS 69
Query 61 LYEQVFYEMLELRETE---------LARLLLRETAVLQQLRQQNPEHFKRLDTLANRPFF 111
+ ++F+E+ + + E +L+++ V ++ + +L TL N F
Sbjct 70 M--KIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLEN--FR 125
Query 112 DAREVYQGTPKEKRRAALAQALALGLDCVP------------SSRLLSLIGMALNYQKH- 158
+ ++ + + RA + L ++ P +SRL +LI +LN+Q
Sbjct 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTSRLRTLINQSLNWQHQL 185
Query 159 -KGILPSTSEFNLY-SNATRRPKEAKELYP 186
K P+ L+ ++ R P +A+ P
Sbjct 186 CKNPRPNPDIKTLFVDHSCRLPNDARAPSP 215
> ath:AT1G15750 TPL; TPL (TOPLESS); protein binding / protein
homodimerization/ transcription repressor
Length=1131
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 29/177 (16%)
Query 1 QFLAESNLPRTVQMLQEESGVCLNSVESVDKFVRDVHHGRWDEVLRVTATTSLSEETQQQ 60
QFL E TV L++ESG N + F +VH+G WDEV + + + ++ +
Sbjct 14 QFLDEEKFKETVHKLEQESGFFFN----MKYFEDEVHNGNWDEVEKYLSGFTKVDDNRYS 69
Query 61 LYEQVFYEMLELRETE---------LARLLLRETAVLQQLRQQNPEHFKRLDTLANRPFF 111
+ ++F+E+ + + E +L+++ V ++ + +L TL N F
Sbjct 70 M--KIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLEN--FR 125
Query 112 DAREVYQGTPKEKRRAALAQALALGLDCVP------------SSRLLSLIGMALNYQ 156
+ ++ + + RA + L ++ P +SRL +LI +LN+Q
Sbjct 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRNSRLRTLINQSLNWQ 182
> hsa:90665 TBL1Y, TBL1; transducin (beta)-like 1, Y-linked; K04508
transducin (beta)-like 1
Length=522
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 17/21 (80%), Gaps = 0/21 (0%)
Query 205 AFSPDGRYLASGLIDGFIEIW 225
AFSPDG+YLASG D ++ IW
Sbjct 459 AFSPDGKYLASGSFDKYVHIW 479
> dre:393827 wdr61, MGC77675, zgc:77675; WD repeat domain 61;
K12602 WD repeat-containing protein 61
Length=305
Score = 38.1 bits (87), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 17/20 (85%), Gaps = 0/20 (0%)
Query 205 AFSPDGRYLASGLIDGFIEI 224
A+SPDG+YLASG IDG I I
Sbjct 155 AYSPDGKYLASGAIDGIINI 174
> xla:444484 wdr61, MGC81859; WD repeat domain 61; K12602 WD repeat-containing
protein 61
Length=305
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 17/20 (85%), Gaps = 0/20 (0%)
Query 205 AFSPDGRYLASGLIDGFIEI 224
A+SPDG+YLASG IDG I I
Sbjct 155 AYSPDGKYLASGAIDGIINI 174
> mmu:66317 Wdr61, 2700038L12Rik, 2810418I05Rik, REC14; WD repeat
domain 61; K12602 WD repeat-containing protein 61
Length=305
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 17/20 (85%), Gaps = 0/20 (0%)
Query 205 AFSPDGRYLASGLIDGFIEI 224
A+SPDG+YLASG IDG I I
Sbjct 155 AYSPDGKYLASGAIDGIINI 174
> hsa:80349 WDR61, REC14, SKI8; WD repeat domain 61; K12602 WD
repeat-containing protein 61
Length=305
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 17/20 (85%), Gaps = 0/20 (0%)
Query 205 AFSPDGRYLASGLIDGFIEI 224
A+SPDG+YLASG IDG I I
Sbjct 155 AYSPDGKYLASGAIDGIINI 174
> mmu:81004 Tbl1xr1, 8030499H02Rik, A630076E03Rik, AW539987, C21,
C230089I12Rik, DC42, Ira1, TBLR1; transducin (beta)-like
1X-linked receptor 1; K04508 transducin (beta)-like 1
Length=514
Score = 37.7 bits (86), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 16/21 (76%), Gaps = 0/21 (0%)
Query 205 AFSPDGRYLASGLIDGFIEIW 225
AFSPDGRYLASG D + IW
Sbjct 449 AFSPDGRYLASGSFDKCVHIW 469
> xla:398608 tbl1xr1-a, TBLR1; transducin (beta)-like 1 X-linked
receptor 1; K04508 transducin (beta)-like 1
Length=519
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 16/21 (76%), Gaps = 0/21 (0%)
Query 205 AFSPDGRYLASGLIDGFIEIW 225
AFSPDGRYLASG D + IW
Sbjct 454 AFSPDGRYLASGSFDKCVHIW 474
> xla:779369 tbl1xr1-b, MGC80502, TBLR1; transducin (beta)-like
1 X-linked receptor 1; K04508 transducin (beta)-like 1
Length=522
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 16/21 (76%), Gaps = 0/21 (0%)
Query 205 AFSPDGRYLASGLIDGFIEIW 225
AFSPDGRYLASG D + IW
Sbjct 457 AFSPDGRYLASGSFDKCVHIW 477
> hsa:79718 TBL1XR1, C21, DC42, FLJ12894, IRA1, TBLR1; transducin
(beta)-like 1 X-linked receptor 1; K04508 transducin (beta)-like
1
Length=514
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 16/21 (76%), Gaps = 0/21 (0%)
Query 205 AFSPDGRYLASGLIDGFIEIW 225
AFSPDGRYLASG D + IW
Sbjct 449 AFSPDGRYLASGSFDKCVHIW 469
> mmu:76646 Wdr38, 1700123D08Rik; WD repeat domain 38
Length=303
Score = 37.4 bits (85), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query 193 IRFTNKSHPE--CAAFSPDGRYLASGLIDGFIEIW 225
+RF + H E C+AFSPDGR L + DG + +W
Sbjct 19 VRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVW 53
> hsa:6907 TBL1X, EBI, SMAP55, TBL1; transducin (beta)-like 1X-linked;
K04508 transducin (beta)-like 1
Length=577
Score = 36.6 bits (83), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 0/21 (0%)
Query 205 AFSPDGRYLASGLIDGFIEIW 225
AFSPDG+YLASG D + IW
Sbjct 512 AFSPDGKYLASGSFDKCVHIW 532
> xla:444069 wdr70, MGC82743; WD repeat domain 70
Length=610
Score = 36.2 bits (82), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 0/25 (0%)
Query 201 PECAAFSPDGRYLASGLIDGFIEIW 225
P C +S DG+++A+G DG I+IW
Sbjct 291 PTCCTYSRDGKFIAAGCQDGSIQIW 315
> mmu:21372 Tbl1x, 5330429M20, Tbl1; transducin (beta)-like 1
X-linked; K04508 transducin (beta)-like 1
Length=527
Score = 36.2 bits (82), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 0/21 (0%)
Query 205 AFSPDGRYLASGLIDGFIEIW 225
AFSPDG+YLASG D + IW
Sbjct 462 AFSPDGKYLASGSFDKCVHIW 482
> ath:AT1G48870 WD-40 repeat family protein
Length=593
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 17/20 (85%), Gaps = 0/20 (0%)
Query 206 FSPDGRYLASGLIDGFIEIW 225
FSPDG+YLA+G DG ++IW
Sbjct 206 FSPDGKYLATGGEDGVVKIW 225
> cel:T05H4.14 gad-1; GAstrulation Defective family member (gad-1)
Length=620
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 0/25 (0%)
Query 201 PECAAFSPDGRYLASGLIDGFIEIW 225
P+ FSPDG+++A+G DG ++ W
Sbjct 283 PQVCTFSPDGKWIAAGCDDGSVQAW 307
> dre:792625 WD repeat domain 70-like
Length=1175
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 0/25 (0%)
Query 201 PECAAFSPDGRYLASGLIDGFIEIW 225
P C +S DG+ +A+G DG I+IW
Sbjct 1084 PTCCTYSRDGKLIAAGCQDGTIQIW 1108
> dre:406291 katnb1, wu:fj32f02, wu:fj65h01, zgc:56071; katanin
p80 (WD repeat containing) subunit B 1
Length=694
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query 191 KSIRFTNKSHPE---CAAFSPDGRYLASGLIDGFIEIW 225
K F K H + C AFSPDG++LAS D +++W
Sbjct 137 KGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLW 174
Score = 29.6 bits (65), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query 184 LYPQDVAKSIR--FTNKSHPECAAFSPDGRYLASGLIDGFIEIW 225
L+ + AK +R +K+ F P G YLASG +D I++W
Sbjct 89 LWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLW 132
> cel:K04G11.4 hypothetical protein
Length=395
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query 151 MALNYQKHKGILPSTSEFNLYSNATRRPK-EAKELYPQ-DVAKSIRFTNKSHPECAAFSP 208
+ L Q +L ST + S T P A L+P + I +K FSP
Sbjct 58 VGLPAQASTPMLSSTPGPSYSSAPTPMPNPSAANLWPTYKLVAEIPNAHKKSISGIKFSP 117
Query 209 DGRYLASGLIDGFIEIW 225
DGRY+ SG D I+IW
Sbjct 118 DGRYMGSGSADCSIKIW 134
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 0/21 (0%)
Query 205 AFSPDGRYLASGLIDGFIEIW 225
F+ DG YLASG DG + IW
Sbjct 239 CFNRDGAYLASGSYDGIVRIW 259
> ath:AT5G24320 WD-40 repeat family protein
Length=698
Score = 35.4 bits (80), Expect = 0.17, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query 179 KEAKELYPQDVAKSIRFTNKSHPECAAFSPDGRYLASGLIDGFIEIW 225
KEAKEL + I+ ++ FSPDGRYLAS DG + +W
Sbjct 233 KEAKELSALFKGQEIQ-AHEGAILAMKFSPDGRYLASAGEDGVLRVW 278
> xla:398044 cdc20, X-FZY; cell division cycle 20 homolog; K03363
cell division cycle 20, cofactor of APC complex
Length=507
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 0/20 (0%)
Query 206 FSPDGRYLASGLIDGFIEIW 225
+SPDGRYLASG D + +W
Sbjct 325 WSPDGRYLASGANDNLVNVW 344
> xla:379130 cdc20; cell division cycle 20 homolog; K03363 cell
division cycle 20, cofactor of APC complex
Length=506
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 0/20 (0%)
Query 206 FSPDGRYLASGLIDGFIEIW 225
+SPDGRYLASG D + +W
Sbjct 324 WSPDGRYLASGANDNLVNVW 343
> dre:100007282 autophagy related 16 like 2-like
Length=588
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 0/31 (0%)
Query 195 FTNKSHPECAAFSPDGRYLASGLIDGFIEIW 225
F S A FSPDG +LA+G DG + IW
Sbjct 512 FKCGSDSTKAIFSPDGSFLAAGSADGAVYIW 542
> sce:YBL008W HIR1; Hir1p; K11293 protein HIRA/HIR1
Length=840
Score = 35.0 bits (79), Expect = 0.22, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 0/23 (0%)
Query 203 CAAFSPDGRYLASGLIDGFIEIW 225
C FSPDG+YLASG D + IW
Sbjct 84 CVKFSPDGKYLASGSDDRILLIW 106
> bbo:BBOV_II003290 18.m06277; WD domain, G-beta repeat containing
protein
Length=611
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 45/131 (34%)
Query 126 RAALAQALALGLD------------------CVPSSRLLSLIGMALNYQKHKGILPSTSE 167
RAAL++ LA +D CVPS+RLL+L+ A+ Q+ L +
Sbjct 114 RAALSKELAWDMDTSCTVLWSRIEKLLSPEMCVPSNRLLTLLYQAVELQE----LYCKNH 169
Query 168 FNLYSNATRRPKEAKELYPQDVAKSIRFTNKSHPECAA-------------FSPDGRYLA 214
F+ +S +T LY S+R + C A SP G Y+A
Sbjct 170 FS-WSRST-----VMNLYEDHSCASLRMQTR----CIARLHGHLDEVWDIKLSPCGTYVA 219
Query 215 SGLIDGFIEIW 225
SG DG + +W
Sbjct 220 SGSKDGTVILW 230
> tgo:TGME49_058530 WD domain, G-beta repeat-containing protein
Length=556
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 0/67 (0%)
Query 159 KGILPSTSEFNLYSNATRRPKEAKELYPQDVAKSIRFTNKSHPECAAFSPDGRYLASGLI 218
K I+ E L + + R + Y + I ++K C A + DG Y SG
Sbjct 407 KSIVYHPDEIQLLATGSDRKVHFLDTYDGGKIRDIEASDKGETNCVAITKDGNYFCSGGD 466
Query 219 DGFIEIW 225
D + +W
Sbjct 467 DKILRLW 473
> dre:560294 tbl1x, MGC158242, zgc:158242; transducin (beta)-like
1X-linked; K04508 transducin (beta)-like 1
Length=510
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 16/21 (76%), Gaps = 0/21 (0%)
Query 205 AFSPDGRYLASGLIDGFIEIW 225
AFSPDG++LASG D + IW
Sbjct 445 AFSPDGKFLASGSFDKCVHIW 465
> tgo:TGME49_120210 WD-40 repeat protein, putative ; K10599 pre-mRNA-processing
factor 19 [EC:6.3.2.19]
Length=515
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 0/24 (0%)
Query 202 ECAAFSPDGRYLASGLIDGFIEIW 225
+C +F PDG L G +DG + IW
Sbjct 345 KCVSFHPDGMILGGGGVDGSVHIW 368
> ath:AT5G25150 TAF5; TAF5 (TBP-ASSOCIATED FACTOR 5); nucleotide
binding / transcription regulator; K03130 transcription initiation
factor TFIID subunit 5
Length=669
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 0/21 (0%)
Query 205 AFSPDGRYLASGLIDGFIEIW 225
A SPDGRY+ASG DG I +W
Sbjct 551 AMSPDGRYMASGDEDGTIMMW 571
> ath:AT1G64610 WD-40 repeat family protein
Length=647
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query 195 FTNKSHPECAAFSP-DGRYLASGLIDGFIEIW 225
FT+ + C AF+P D Y SG IDG + IW
Sbjct 359 FTHNNFVTCVAFNPVDDNYFISGSIDGKVRIW 390
> dre:571996 WD repeat domain 20-like
Length=578
Score = 34.7 bits (78), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%), Gaps = 0/23 (0%)
Query 203 CAAFSPDGRYLASGLIDGFIEIW 225
C ++SPDG+YLA+G D + +W
Sbjct 241 CVSWSPDGKYLATGGEDDLVTVW 263
> mmu:234699 Edc4, BC022641; enhancer of mRNA decapping 4; K12616
enhancer of mRNA-decapping protein 4
Length=1390
Score = 34.7 bits (78), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query 179 KEAKELYPQDVA--KSIRFTNKSHPEC---AAFSPDGRYLASGLIDGFIEIW 225
+ + +P DV+ K K H C A SPDG LA+ DGF++ W
Sbjct 273 RSSHNTWPVDVSQIKQGFIVVKGHSTCLSEGALSPDGTVLATASHDGFVKFW 324
> ath:AT5G42010 WD-40 repeat family protein
Length=709
Score = 34.3 bits (77), Expect = 0.33, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query 195 FTNKSHPECAAFSP-DGRYLASGLIDGFIEIW 225
F++KS C AF+P D Y SG IDG + IW
Sbjct 401 FSHKSFVTCVAFNPVDDNYFISGSIDGKVRIW 432
> bbo:BBOV_IV008010 23.m06565; hypothetical protein
Length=331
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 0/21 (0%)
Query 205 AFSPDGRYLASGLIDGFIEIW 225
+ SPDGRYL SG DG + IW
Sbjct 258 SISPDGRYLLSGCTDGRLSIW 278
> dre:266990 pwp2h, cb471, zgc:56063; PWP2 periodic tryptophan
protein homolog (yeast); K14558 periodic tryptophan protein
2
Length=937
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 18/21 (85%), Gaps = 0/21 (0%)
Query 205 AFSPDGRYLASGLIDGFIEIW 225
A+SPDG+YLA+G DG +++W
Sbjct 392 AYSPDGQYLATGGDDGKVKVW 412
> ath:AT4G05410 transducin family protein / WD-40 repeat family
protein; K14793 ribosomal RNA-processing protein 9
Length=504
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query 147 SLIGMALNYQKHKGILPSTSEFNLYSNATRRPKEAKELYPQD-VAKSIRFT-----NKSH 200
S++ +AL+ +G S ++ + + K K ++P D + KS NK+H
Sbjct 163 SVVSVALSDDDSRGFSASKDGTIMHWDVSS-GKTDKYIWPSDEILKSHGMKLREPRNKNH 221
Query 201 PE---CAAFSPDGRYLASGLIDGFIEIW 225
A S DGRYLA+G +D + IW
Sbjct 222 SRESLALAVSSDGRYLATGGVDRHVHIW 249
Lambda K H
0.318 0.132 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 7440393584
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40