bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_966 164,496 sequences; 82,071,388 total letters Query= Eace_0619_orf2 Length=210 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_085230 PRP38 family domain-containing protein ; K12... 254 2e-67 tpv:TP04_0793 hypothetical protein 176 5e-44 bbo:BBOV_III008900 17.m07776; PRP38 family protein; K12850 pre... 165 1e-40 pfa:PF14_0070 pre-mRNA splicing factor, putative; K12850 pre-m... 140 4e-33 ath:AT5G37370 ATSRL1; ATSRL1; binding; K12850 pre-mRNA-splicin... 103 3e-22 hsa:55119 PRPF38B, FLJ10330, MGC163218, MGC41809, NET1, RP11-2... 99.8 7e-21 mmu:66921 Prpf38b, 1110021E09Rik, AU018955; PRP38 pre-mRNA pro... 99.0 1e-20 dre:406810 prpf38b, wu:fc43b05, zgc:63496; PRP38 pre-mRNA proc... 96.7 5e-20 cel:Y108G3AL.2 hypothetical protein; K12850 pre-mRNA-splicing ... 72.0 2e-12 tpv:TP03_0267 hypothetical protein; K12849 pre-mRNA-splicing f... 33.1 0.70 dre:494038 snai2, cb147, cb355, id:ibd5003, sb:cb355, sb:cb569... 32.7 0.81 pfa:PFI0395w conserved Plasmodium protein, unknown function 32.0 1.7 bbo:BBOV_IV007490 23.m06033; pre-mRNA splicing factor; K12849 ... 31.6 1.9 sce:YBR236C ABD1; Abd1p (EC:2.1.1.56); K00565 mRNA (guanine-N7... 31.6 2.3 bbo:BBOV_III002600 17.m07248; 1-deoxy-D-xylulose-5-phosphate s... 31.6 2.3 cpv:cgd3_1920 possible PRP38 pre-mRNA splicing factor family m... 30.4 5.0 pfa:PF11_0336 pre-mRNA splicing factor, putative; K12849 pre-m... 29.6 7.2 tgo:TGME49_041140 DEAD/DEAH box helicase, putative (EC:6.1.1.11) 29.6 8.3 > tgo:TGME49_085230 PRP38 family domain-containing protein ; K12850 pre-mRNA-splicing factor 38B Length=614 Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 121/183 (66%), Positives = 143/183 (78%), Gaps = 5/183 (2%) Query 32 SAAAPVAVAPLAAAPATDVAAAENDKEDEEE--AIARCHLHTKPQLSCKFCRKYKSFTQQ 89 SA P VA PAT A + +ED + A+ RCHLHTKPQL CKFCRKYKSF QQ Sbjct 60 SAGTPAVVA-APGPPATTAVGAVDAEEDSGDTWAVNRCHLHTKPQLHCKFCRKYKSFAQQ 118 Query 90 MGVLQQRAIA--ADEETQKKNMVQMTDSTTYNVNQLLRANILSSEYFKSLHQLKSFHEVV 147 +G+LQ+R + D++ K+NMV+MTDSTTYNVN LLR+NILSSEYFKSLH+LK+ EVV Sbjct 119 LGILQKRELKQQEDDDGMKRNMVEMTDSTTYNVNALLRSNILSSEYFKSLHELKTVPEVV 178 Query 148 AEVAAYADHAEPYCSGSTRAPSTLFCCLYKLFTLKLTDKQMHMLLNHRESPYVRCTGFLY 207 E+ YA HAEPYCSGS+RAPSTLFCCLYKLFT+KLT KQ+ LL++ +SPYVRCTGFLY Sbjct 179 DEITQYAQHAEPYCSGSSRAPSTLFCCLYKLFTMKLTTKQLEQLLDYSDSPYVRCTGFLY 238 Query 208 LRY 210 LRY Sbjct 239 LRY 241 > tpv:TP04_0793 hypothetical protein Length=239 Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 83/153 (54%), Positives = 115/153 (75%), Gaps = 2/153 (1%) Query 58 EDEEEAIARCHLHTKPQLSCKFCRKYKSFTQQMGVLQQRAIAADEETQKKNMVQMTDSTT 117 ++ E++ RCHLHTKP+L+CKFCRK+KS ++ + ++ + K N + MT+S T Sbjct 77 QNSLESVQRCHLHTKPELNCKFCRKFKSSVHEISK-IAQKKSSSSKEDKANQIPMTNSVT 135 Query 118 YNVNQLLRANILSSEYFKSLHQLKSFHEVVAEVAAYADHAEPYCSGSTRAPSTLFCCLYK 177 YN+N LLR+NILSSEY+KSL +K+F++V E+ +A H+EPYCS +TRAPST+FCCLY+ Sbjct 136 YNMNDLLRSNILSSEYYKSL-SVKNFYQVFDELVQFATHSEPYCSTATRAPSTIFCCLYR 194 Query 178 LFTLKLTDKQMHMLLNHRESPYVRCTGFLYLRY 210 LKLT+KQM+ LL + +SPY RC GFLYLRY Sbjct 195 FLVLKLTEKQMNFLLENVKSPYARCCGFLYLRY 227 > bbo:BBOV_III008900 17.m07776; PRP38 family protein; K12850 pre-mRNA-splicing factor 38B Length=483 Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 91/200 (45%), Positives = 130/200 (65%), Gaps = 19/200 (9%) Query 28 TCVASAAAPVAVAPLAAAPAT--DVAAAE---------------NDKEDEEEAIARCHLH 70 T ++++ V + P+A T ++AAA ED E++ CH+H Sbjct 74 TASSTSSVNVGIQPIATELGTSDNIAAASVPGHMELPPTSVSYTTHTEDLLESVQTCHMH 133 Query 71 TKPQLSCKFCRKYKSFTQQMGVLQQRAIAADEETQKKNMVQMTDSTTYNVNQLLRANILS 130 TKP L+CKFCRKYKS ++ L Q + + E T++ + + MT+S+TYN+N LL NIL+ Sbjct 134 TKPDLNCKFCRKYKSAVHELSRLSQ--LRSQEATERPDQLDMTNSSTYNMNTLLLNNILN 191 Query 131 SEYFKSLHQLKSFHEVVAEVAAYADHAEPYCSGSTRAPSTLFCCLYKLFTLKLTDKQMHM 190 S+Y+KSL + S H ++ E+A YADH EPYC +TR PSTLFCCL+KLFTL+LT++QM Sbjct 192 SDYYKSLSTMTSHHSIIDELAQYADHVEPYCKTATRVPSTLFCCLHKLFTLRLTERQMED 251 Query 191 LLNHRESPYVRCTGFLYLRY 210 L++ +SPY RC GFLYLR+ Sbjct 252 LIDCTKSPYPRCCGFLYLRF 271 > pfa:PF14_0070 pre-mRNA splicing factor, putative; K12850 pre-mRNA-splicing factor 38B Length=690 Score = 140 bits (352), Expect = 4e-33, Method: Composition-based stats. Identities = 69/106 (65%), Positives = 88/106 (83%), Gaps = 0/106 (0%) Query 105 QKKNMVQMTDSTTYNVNQLLRANILSSEYFKSLHQLKSFHEVVAEVAAYADHAEPYCSGS 164 +KKN ++MT++TTYNVN LLR NILSSEYFKSL +K+F EVV E+ +YADH EPYC GS Sbjct 168 EKKNCLEMTNTTTYNVNTLLRNNILSSEYFKSLIPIKTFKEVVDEIHSYADHVEPYCIGS 227 Query 165 TRAPSTLFCCLYKLFTLKLTDKQMHMLLNHRESPYVRCTGFLYLRY 210 RAPSTLFCCLYK FT++L++KQ+ L+ +++S Y+R GFLYLRY Sbjct 228 NRAPSTLFCCLYKFFTMQLSEKQLKSLIENKDSCYIRACGFLYLRY 273 > ath:AT5G37370 ATSRL1; ATSRL1; binding; K12850 pre-mRNA-splicing factor 38B Length=111 Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 44/82 (53%), Positives = 60/82 (73%), Gaps = 0/82 (0%) Query 120 VNQLLRANILSSEYFKSLHQLKSFHEVVAEVAAYADHAEPYCSGSTRAPSTLFCCLYKLF 179 + ++L NILSS+YFK L+ LK++HEV+ E+ +H EP+ G+ R PST +C LYK F Sbjct 15 LEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRGPSTAYCLLYKFF 74 Query 180 TLKLTDKQMHMLLNHRESPYVR 201 T+KLT KQMH LL H +SPY+R Sbjct 75 TMKLTVKQMHGLLKHTDSPYIR 96 > hsa:55119 PRPF38B, FLJ10330, MGC163218, MGC41809, NET1, RP11-293A10.1; PRP38 pre-mRNA processing factor 38 (yeast) domain containing B; K12850 pre-mRNA-splicing factor 38B Length=546 Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 51/116 (43%), Positives = 68/116 (58%), Gaps = 19/116 (16%) Query 114 DSTTYNVNQLLRANILSSEYFK-SLHQLKSFHEVVAEVAAYADHAEPYCSGSTRA----- 167 + T N+N ++ NILSS YFK L++LK++HEVV E+ H EP+ GS + Sbjct 52 NEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTG 111 Query 168 -------------PSTLFCCLYKLFTLKLTDKQMHMLLNHRESPYVRCTGFLYLRY 210 ST FC LYKLFTLKLT KQ+ L+ H +SPY+R GF+Y+RY Sbjct 112 MCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRY 167 > mmu:66921 Prpf38b, 1110021E09Rik, AU018955; PRP38 pre-mRNA processing factor 38 (yeast) domain containing B; K12850 pre-mRNA-splicing factor 38B Length=542 Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 19/113 (16%) Query 117 TYNVNQLLRANILSSEYFK-SLHQLKSFHEVVAEVAAYADHAEPYCSGSTRA-------- 167 T N+N ++ NILSS YFK L++LK++HEVV E+ H EP+ GS + Sbjct 56 TMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCG 115 Query 168 ----------PSTLFCCLYKLFTLKLTDKQMHMLLNHRESPYVRCTGFLYLRY 210 ST FC LYKLFTLKLT KQ+ L+ H +SPY+R GF+Y+RY Sbjct 116 GVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRY 168 > dre:406810 prpf38b, wu:fc43b05, zgc:63496; PRP38 pre-mRNA processing factor 38 (yeast) domain containing B; K12850 pre-mRNA-splicing factor 38B Length=501 Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 19/122 (15%) Query 108 NMVQMTDSTTYNVNQLLRANILSSEYFK-SLHQLKSFHEVVAEVAAYADHAEPYCSGSTR 166 N+ + T N+N ++ N+LSS YFK L++LK++HEVV E+ +H EP+ GS + Sbjct 24 NLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTYHEVVDEIYFKVNHVEPWEKGSRK 83 Query 167 A------------------PSTLFCCLYKLFTLKLTDKQMHMLLNHRESPYVRCTGFLYL 208 ST FC LYKLFTLKLT KQ+ L+ H +SP +R GF+Y+ Sbjct 84 TAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHSDSPDIRALGFMYI 143 Query 209 RY 210 RY Sbjct 144 RY 145 > cel:Y108G3AL.2 hypothetical protein; K12850 pre-mRNA-splicing factor 38B Length=327 Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 19/116 (16%) Query 114 DSTTYNVNQLLRANILSSEYFKS-LHQLKSFHEVVAEVAAYADHAEPYCSGSTR------ 166 + T N+N L+ NI S Y+K+ L ++ +F ++ ++ H EP+ G+ R Sbjct 60 NKVTMNLNTLVLENIRESYYYKNNLVEIDNFQTLIEQIFYQVKHLEPWEKGTRRLQGMTG 119 Query 167 ------------APSTLFCCLYKLFTLKLTDKQMHMLLNHRESPYVRCTGFLYLRY 210 S+ +C LY+LF LK++ KQ+ +LN R+S Y+R GF+Y+RY Sbjct 120 MCGGVRGVGAGGVVSSAYCLLYRLFNLKISRKQLISMLNSRQSVYIRGLGFMYIRY 175 > tpv:TP03_0267 hypothetical protein; K12849 pre-mRNA-splicing factor 38A Length=193 Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust. Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 7/108 (6%) Query 109 MVQMTDSTTYNVN----QLLRANILSSEYFKSLHQLKSFHEVVAEVAAYADHAEPYCSGS 164 M TD T + ++ Q L + IL + + S + +S + AE Y G+ Sbjct 1 MANRTDPTAHLIHGTNPQFLFSKILRDKVYNSFYWKESCFGLTAESLIDKAVQIKYVGGT 60 Query 165 ---TRAPSTLFCCLYKLFTLKLTDKQMHMLLNHRESPYVRCTGFLYLR 209 R PS C + K+ ++ + +H + + + Y+R G Y+R Sbjct 61 FGGNRQPSPFICLVLKMLQIQPEMEIVHEYIKNEDYKYLRALGIYYMR 108 > dre:494038 snai2, cb147, cb355, id:ibd5003, sb:cb355, sb:cb569, slug, wu:fb83e12, wu:fd19g11, zgc:92564; snail homolog 2 (Drosophila); K05706 snail 2 Length=257 Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust. Identities = 19/93 (20%), Positives = 44/93 (47%), Gaps = 10/93 (10%) Query 22 IAQRETTCVASAAAPVAVAPLAAAPAT--------DVAAAENDKEDEEEAIARCHLHTKP 73 I T+ + + P ++P++ P++ D + +E+ + DE+E I L Sbjct 56 ITVWTTSNLPLSPLPHDLSPISGYPSSLSDTSSNKDHSGSESPRSDEDERIQSTKLSDAE 115 Query 74 QLSCKFCRKYKSFTQQMGVLQQRAIAADEETQK 106 + C C KS++ G+++ + + D +++K Sbjct 116 KFQCGLCN--KSYSTYSGLMKHKQLHCDAQSRK 146 > pfa:PFI0395w conserved Plasmodium protein, unknown function Length=1516 Score = 32.0 bits (71), Expect = 1.7, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 0/57 (0%) Query 54 ENDKEDEEEAIARCHLHTKPQLSCKFCRKYKSFTQQMGVLQQRAIAADEETQKKNMV 110 EN+K+D ++ + C C KY F QQ Q++I ++ QKKN++ Sbjct 829 ENEKKDFDKYYKIINNMINQNTVCCACAKYNYFNQQKYKQTQQSINYHQDIQKKNII 885 > bbo:BBOV_IV007490 23.m06033; pre-mRNA splicing factor; K12849 pre-mRNA-splicing factor 38A Length=202 Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust. Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%) Query 109 MVQMTDSTTYNVN----QLLRANILSSEYFKSLHQLKSFHEVVAEVAAYADHAEPYCSGS 164 M TD T V+ Q L + IL + + S++ +S + AE Y G+ Sbjct 1 MANRTDPTAVMVHGTNPQNLFSKILRDKVYNSMYWKESCFGLTAESIIDKAIDLQYIGGT 60 Query 165 ---TRAPSTLFCCLYKLFTLKLTDKQMHMLLNHRESPYVRCTGFLYLR 209 R PS C + KL ++ + + + + E Y+R G Y+R Sbjct 61 FGGNRQPSPFLCLVLKLLQIQPEIEIIQEYIRNEEFKYLRALGIYYMR 108 > sce:YBR236C ABD1; Abd1p (EC:2.1.1.56); K00565 mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] Length=436 Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust. Identities = 14/45 (31%), Positives = 30/45 (66%), Gaps = 0/45 (0%) Query 81 RKYKSFTQQMGVLQQRAIAADEETQKKNMVQMTDSTTYNVNQLLR 125 R+++ + Q+ + +QRA EE K++ ++MT + + NV+Q++R Sbjct 79 RRHERYDQEERLRKQRAQKLREEQLKRHEIEMTANRSINVDQIVR 123 > bbo:BBOV_III002600 17.m07248; 1-deoxy-D-xylulose-5-phosphate synthase family protein (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] Length=686 Score = 31.6 bits (70), Expect = 2.3, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 0/41 (0%) Query 149 EVAAYADHAEPYCSGSTRAPSTLFCCLYKLFTLKLTDKQMH 189 +V HA + +G+T + + FCC+Y F + D+ +H Sbjct 412 DVGIAEQHAVTFAAGTTISGAKPFCCIYSTFMQRALDQVIH 452 > cpv:cgd3_1920 possible PRP38 pre-mRNA splicing factor family member ; K12849 pre-mRNA-splicing factor 38A Length=261 Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust. Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 4/100 (4%) Query 111 QMTDSTTYNVNQLLRANILSSEYFKSL-HQLKSFHEVVAEVAAYADHAEPYCSGSTRAPS 169 Q + ++V+ +LR + SS Y+K L S E + + A D+ G R + Sbjct 5 QNSHHKLFSVSSILRDRVFSSIYWKGECFALDS--ETILDKAVLLDYIGT-TYGGDRKAT 61 Query 170 TLFCCLYKLFTLKLTDKQMHMLLNHRESPYVRCTGFLYLR 209 C L KL ++ + + + +N+ Y+ G +YLR Sbjct 62 PFLCLLVKLLQIRPSTEIVLEYINNPRFKYLTALGIVYLR 101 > pfa:PF11_0336 pre-mRNA splicing factor, putative; K12849 pre-mRNA-splicing factor 38A Length=386 Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust. Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 0/47 (0%) Query 163 GSTRAPSTLFCCLYKLFTLKLTDKQMHMLLNHRESPYVRCTGFLYLR 209 G R P+ C + KL ++ ++ + + + Y+R G YLR Sbjct 62 GGNRKPTRFLCLILKLLQIQPDKDIIYEYIKNEDFVYLRALGIFYLR 108 > tgo:TGME49_041140 DEAD/DEAH box helicase, putative (EC:6.1.1.11) Length=1454 Score = 29.6 bits (65), Expect = 8.3, Method: Compositional matrix adjust. Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 13/82 (15%) Query 44 AAPATDVAAAENDKEDEEEAIARCHLHTKPQLSCKFCRKYKSFTQQMGVLQQRAIAADEE 103 AA A ++ +A++D+EDEE+A + K T+ + LQ R + A E+ Sbjct 906 AADAGEIESAKDDEEDEEKAFVSAE-------------ERKEMTRVLKRLQSRGLVACED 952 Query 104 TQKKNMVQMTDSTTYNVNQLLR 125 + + + D+ + +L++ Sbjct 953 AMEGEIGKAVDTENESGKRLMK 974 Lambda K H 0.322 0.131 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 6559193640 Database: egene_temp_file_orthology_annotation_similarity_blast_database_966 Posted date: Sep 16, 2011 8:45 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40