bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_0391_orf1
Length=199
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_120070 CDK-activating kinase assembly factor, putat... 141 1e-33
pfa:PFE0610c CDK-activating kinase assembly factor, putative; ... 85.9 8e-17
cpv:cgd1_3300 ring domain protein ; K10842 CDK-activating kina... 84.0 3e-16
tpv:TP02_0520 hypothetical protein; K10842 CDK-activating kina... 82.4 9e-16
sce:YDR460W TFB3, RIG2; Subunit of TFIIH and nucleotide excisi... 59.3 8e-09
mmu:17420 Mnat1, E130115E11Rik, MAT1, P36; menage a trois 1; K... 57.0 4e-08
hsa:4331 MNAT1, CAP35, MAT1, RNF66, TFB3; menage a trois homol... 55.8 1e-07
cel:F53G2.7 mnat-1; MNAT (menage a trois) TFIIH subunit family... 54.3 2e-07
xla:380053 mnat1, MAT1, MGC64497; menage a trois 1; K10842 CDK... 53.9 4e-07
dre:450080 mnat1, zgc:101599; menage a trois homolog 1; K10842... 50.1 5e-06
cel:T05A12.4 hypothetical protein 36.6 0.066
bbo:BBOV_II005680 18.m06472; hypothetical protein 36.2 0.076
sce:YDL058W USO1, INT1; Essential protein involved in the vesi... 35.4 0.13
ath:AT5G22750 RAD5; RAD5; ATP binding / ATP-dependent helicase... 34.7 0.21
dre:561511 similar to tripartite motif-containing 35 34.7
ath:AT5G13530 KEG; KEG (KEEP ON GOING); protein binding / prot... 33.5 0.47
dre:799678 ret finger protein-like 33.5 0.54
ath:AT4G30820 cyclin-dependent kinase-activating kinase assemb... 33.5 0.54
hsa:117854 TRIM6, RNF89; tripartite motif containing 6; K11999... 32.7 0.88
pfa:PFD0880w proteasome regulatory component, putative; K15030... 32.7 0.89
mmu:94088 Trim6, C430046K18Rik, D7Ertd684e; tripartite motif-c... 32.7 0.95
dre:557392 MGC136778, wu:fk35e05; zgc:136778 32.3 0.98
hsa:445372 TRIM6-TRIM34, IFP1, RNF21, TRIM34; TRIM6-TRIM34 rea... 32.3 1.0
ath:AT3G48030 hypoxia-responsive family protein / zinc finger ... 32.3 1.2
cel:F22E12.4 egl-9; EGg Laying defective family member (egl-9) 32.0 1.4
dre:563772 trim54, si:dkey-221h15.2; tripartite motif-containi... 31.6 2.1
tpv:TP04_0829 hypothetical protein; K10695 E3 ubiquitin-protei... 31.2 2.3
dre:100004944 ret finger protein 2-like 31.2 2.4
hsa:10206 TRIM13, CAR, DLEU5, LEU5, RFP2, RNF77; tripartite mo... 31.2 2.7
dre:561314 similar to tripartite motif-containing 35; K12012 t... 30.8 3.4
dre:561381 similar to tripartite motif-containing 35; K12012 t... 30.8 3.6
dre:393500 MGC66440, deltex3, dtx3, wu:fi25g12; zgc:66440; K06... 30.8 3.6
mmu:20128 Trim30a, Rpt-1, Rpt1, Trim30; tripartite motif-conta... 30.4 4.5
tpv:TP04_0515 hypothetical protein 30.0 5.0
dre:100008070 ns:zf-e68 30.0 5.1
dre:799300 myhz1.2, ns:zf-e523, si:ch211-158m24.8; myosin, hea... 30.0 5.1
dre:492475 zgc:103481 30.0 5.3
dre:100330078 ret finger protein-like; K12012 tripartite motif... 30.0 5.8
dre:100002502 tripartite motif protein 21-like 30.0 5.9
dre:558883 tprb, si:dkey-97o5.5, tpr, wu:fi76g05; translocated... 29.6 6.3
dre:562814 si:ch211-284p22.1 29.6 8.1
dre:555877 btr31; bloodthirsty-related gene family, member 31 29.3
dre:557841 zgc:172266 29.3 8.8
hsa:79784 MYH14, DFNA4, DKFZp667A1311, FLJ13881, FLJ43092, KIA... 29.3 8.8
ath:AT1G57820 VIM1; VIM1 (VARIANT IN METHYLATION 1); DNA bindi... 29.3 9.5
dre:414846 rnf141, zgc:86917; ring finger protein 141 29.3
> tgo:TGME49_120070 CDK-activating kinase assembly factor, putative
(EC:1.14.16.4); K10842 CDK-activating kinase assembly
factor MAT1
Length=279
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 106/163 (65%), Gaps = 8/163 (4%)
Query 30 MEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFG-GGTTGVISTNAKGACPVC 88
M+ Y+C VC +C + ++KLF SDVC HR+C +CL FG G G +G CPVC
Sbjct 1 MDNYDCPVCYESCYFHPERKLFHSDVCKHRICGSCLHIHFGENGARG----ERRGFCPVC 56
Query 89 QRSLTRGNYVLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIYEL 148
+ SLTR NY +PD+++ EK+IR+RV N+ R+ F +TPAY+DY E+KE+ +Y+L
Sbjct 57 RTSLTRANYKETDPDMEVLETEKEIRRRVEAIYNSTRERFPDTPAYDDYREKKEDIVYQL 116
Query 149 VYGTDEQLKRRLENRLRELEGHGRAQPQHVQQKQQQQQQQNSE 191
V G+DE +KR+LE LR E R + +Q+ +++++Q+ E
Sbjct 117 VSGSDEAVKRKLEAELRAYE---RQNLKLIQENKEERKQREKE 156
> pfa:PFE0610c CDK-activating kinase assembly factor, putative;
K10842 CDK-activating kinase assembly factor MAT1
Length=260
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 77/139 (55%), Gaps = 8/139 (5%)
Query 30 MEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQ 89
M++Y+C C + +KKL+ D+C H++C CL+ K CP+C+
Sbjct 1 MDEYKCISCFEDIYVNNEKKLYFFDICKHKICGECLENHLNKLN--------KQYCPLCK 52
Query 90 RSLTRGNYVLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIYELV 149
S+T+ N L + + +++ +K +R ++ N R NFENTP YN+YLE+ E+ IY L
Sbjct 53 VSVTKKNVSLFDIEERIYANQKNVRSKLTEIFNKRRHNFENTPLYNNYLEKVEDMIYVLT 112
Query 150 YGTDEQLKRRLENRLRELE 168
DE+ ++ +E +++ E
Sbjct 113 NECDEKKRKIIEAYIKKYE 131
> cpv:cgd1_3300 ring domain protein ; K10842 CDK-activating kinase
assembly factor MAT1
Length=296
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query 31 EQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQR 90
+QY C +C T+ Y D K++ D C H+ C C + + I + CPVC
Sbjct 11 KQYSCPLCMTSTYYKNDIKMYYGDPCGHKFCSECSTKANNNKKSTSILRGSNQICPVCH- 69
Query 91 SLTRGNYVLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIYELVY 150
+ + D FE Q RK+V LN R +F++TP Y++YLE++E+ IY+L+Y
Sbjct 70 GFVKYIADFEYGETDFLKFESQARKQVYTILNETRKDFKDTPCYDNYLEKREDLIYKLIY 129
Query 151 GTDEQLK 157
G D + K
Sbjct 130 GNDTEKK 136
> tpv:TP02_0520 hypothetical protein; K10842 CDK-activating kinase
assembly factor MAT1
Length=245
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Query 34 ECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLT 93
EC +C +DK L SD+C H++C+ C ++Q S + C +C+ LT
Sbjct 4 ECPICLEIITPSSDKILLVSDICDHKICDGCAEKQLS-------SQGSYTQCAICRCHLT 56
Query 94 RGNYVLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIYELVYGTD 153
R ++V + + + K RKRV N R NF+ TP YN YLE++E I+EL D
Sbjct 57 RHSFVPYDMSSNYYEQHKDARKRVLQVYNDTRINFKTTPEYNKYLEDREAIIFELTNSKD 116
Query 154 EQLKRRLENRLR 165
E + +E LR
Sbjct 117 ESRLKSIEQELR 128
> sce:YDR460W TFB3, RIG2; Subunit of TFIIH and nucleotide excision
repair factor 3 complexes, involved in transcription initiation,
required for nucleotide excision repair; ring finger
protein similar to mammalian CAK and TFIIH subunit; K10842
CDK-activating kinase assembly factor MAT1
Length=321
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 64/133 (48%), Gaps = 19/133 (14%)
Query 30 MEQYE-----CSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGA 84
M++YE C +C T+ D K + C HR+CE+C+ + F G
Sbjct 3 MDEYEENKDMCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGP---------AQ 53
Query 85 CPV--CQRSLTRGNY-VLIEPDIDLFSFEKQIRKRVNNALNALRDNFE-NTPAYNDYLEE 140
CP C + L + + I D+++ E IRKRV N N D+F + YN YLEE
Sbjct 54 CPYKGCDKILRKNKFKTQIFDDVEV-EKEVDIRKRVFNVFNKTIDDFNGDLVEYNKYLEE 112
Query 141 KEEAIYELVYGTD 153
E+ IY+L +G D
Sbjct 113 VEDIIYKLDHGID 125
> mmu:17420 Mnat1, E130115E11Rik, MAT1, P36; menage a trois 1;
K10842 CDK-activating kinase assembly factor MAT1
Length=309
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 17/136 (12%)
Query 30 MEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQ 89
M+ C C T KL +VC H LCE+C+ F G G CP C
Sbjct 1 MDDQGCPRCKTTKYRNPSLKLMV-NVCGHTLCESCVDLLFVRGA---------GNCPECG 50
Query 90 RSLTRGNY---VLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIY 146
L + N+ + +P +D E +IRK+V N ++F + YND+LEE EE ++
Sbjct 51 TPLRKSNFRVQLFEDPTVDK---EVEIRKKVLKIYNKREEDFPSLREYNDFLEEVEEIVF 107
Query 147 ELVYGTD-EQLKRRLE 161
L D E K+++E
Sbjct 108 NLTNNVDLENTKKKME 123
> hsa:4331 MNAT1, CAP35, MAT1, RNF66, TFB3; menage a trois homolog
1, cyclin H assembly factor (Xenopus laevis); K10842 CDK-activating
kinase assembly factor MAT1
Length=267
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 17/136 (12%)
Query 30 MEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQ 89
M+ C C T KL +VC H LCE+C+ F G G CP C
Sbjct 1 MDDQGCPRCKTTKYRNPSLKLMV-NVCGHTLCESCVDLLFVRGA---------GNCPECG 50
Query 90 RSLTRGNY---VLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIY 146
L + N+ + +P +D E +IRK+V N ++F + YND+LEE EE ++
Sbjct 51 TPLRKSNFRVQLFEDPTVDK---EVEIRKKVLKIYNKREEDFPSLREYNDFLEEVEEIVF 107
Query 147 ELVYGTD-EQLKRRLE 161
L D + K+++E
Sbjct 108 NLTNNVDLDNTKKKME 123
> cel:F53G2.7 mnat-1; MNAT (menage a trois) TFIIH subunit family
member (mnat-1); K10842 CDK-activating kinase assembly factor
MAT1
Length=310
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 16/123 (13%)
Query 34 ECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLT 93
EC C +N Y + + + C H LC+NC+ F + G C VC R L
Sbjct 3 ECKKCKSNE-YTNKQLVMMINECGHPLCKNCVDNIFALNS---------GNCHVCNRVLR 52
Query 94 RGNY---VLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIYELVY 150
+ N+ + +P ID +F +R+++ N +D+FEN + DY E E +Y LV+
Sbjct 53 KNNFREQIYEDPLIDKETF---LRRKLRKIYNLKQDDFENLREFGDYQERFETVVYNLVF 109
Query 151 GTD 153
T+
Sbjct 110 ETN 112
> xla:380053 mnat1, MAT1, MGC64497; menage a trois 1; K10842 CDK-activating
kinase assembly factor MAT1
Length=309
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 16/133 (12%)
Query 30 MEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQ 89
M+ C C T KL +VC H LCE+C++ F G+ G+C C
Sbjct 1 MDDQGCPRCKTTKYRNPSLKLMV-NVCGHTLCESCVELLFVRGS---------GSCQECD 50
Query 90 RSLTRGNY---VLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIY 146
L + N+ + +P ID E +IRK++ N ++F + YND+LEE EE +
Sbjct 51 TPLRKSNFKVQLFEDPTIDK---EVEIRKKILKIYNKREEDFPSLREYNDFLEEIEEIVL 107
Query 147 ELVYGTDEQLKRR 159
L D RR
Sbjct 108 NLTNNVDLDNTRR 120
> dre:450080 mnat1, zgc:101599; menage a trois homolog 1; K10842
CDK-activating kinase assembly factor MAT1
Length=309
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query 30 MEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQ 89
M+ C C T KL +VC H LCE+C+ F G+ G C C
Sbjct 1 MDDQGCPRCKTTKYRNPSLKLMV-NVCGHTLCESCVDMLFVRGS---------GNCVQCD 50
Query 90 RSLTRGNYVLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIYELV 149
L + N+ + + E +IRK+V N +F + YNDYLE+ E+ ++ L
Sbjct 51 TPLRKSNFRVQLFEDPAIGKEVEIRKKVLKIYNKREFDFSSLTEYNDYLEQVEDIVFNLA 110
Query 150 YGTD-EQLKRRLENRLRE 166
D E K+++E R+
Sbjct 111 NNMDVEMTKQKMEQYQRD 128
> cel:T05A12.4 hypothetical protein
Length=1622
Score = 36.6 bits (83), Expect = 0.066, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 18/77 (23%)
Query 29 TMEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQ-----QQFGGGTTGVISTNAKG 83
T + ++C +CC A F C HR+C+NC + Q+ G V+
Sbjct 1340 TEDIFDCPICC------ASIDCFMVFTCGHRICQNCFEKMRALQRRAGSAEDVV------ 1387
Query 84 ACPVCQRSLTRGNYVLI 100
ACP C R + R V++
Sbjct 1388 ACPTC-RVVNRSKQVMV 1403
> bbo:BBOV_II005680 18.m06472; hypothetical protein
Length=175
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 0/53 (0%)
Query 122 NALRDNFENTPAYNDYLEEKEEAIYELVYGTDEQLKRRLENRLRELEGHGRAQ 174
N R NF++TP YN +LE++E + L YG + + + L+ E A+
Sbjct 33 NDTRSNFKDTPDYNAFLEKRENLVINLTYGRSDPRWEQADAELKAYESQNAAK 85
> sce:YDL058W USO1, INT1; Essential protein involved in the vesicle-mediated
ER to Golgi transport step of secretion; binds
membranes and functions during vesicle docking to the Golgi;
required for assembly of the ER-to-Golgi SNARE complex
Length=1790
Score = 35.4 bits (80), Expect = 0.13, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query 111 KQIRKRVNNALNALRDNFENTPAYNDYLE--EKEEAIYELVYGTDEQLKRRLENRLRELE 168
+ +++ +NNA +R N E LE E+E + ++++ K L +RL+ELE
Sbjct 1585 ETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKELLTSRLKELE 1644
Query 169 GHGRAQPQHVQQKQQQQQQQNSEARAALR 197
Q + QQ+ Q+ E RA +R
Sbjct 1645 -------QELDSTQQKAQKSEEERRAEVR 1666
> ath:AT5G22750 RAD5; RAD5; ATP binding / ATP-dependent helicase/
DNA binding / helicase/ hydrolase, acting on acid anhydrides,
in phosphorus-containing anhydrides / nucleic acid binding
/ protein binding / zinc ion binding
Length=1029
Score = 34.7 bits (78), Expect = 0.21, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 14/64 (21%)
Query 31 EQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQR 90
EQ EC +C D L C HRLC CL + T+G+ CPVC+
Sbjct 790 EQGECPICLEAL---EDAVLTP---CAHRLCRECLLASWRNSTSGL--------CPVCRN 835
Query 91 SLTR 94
++++
Sbjct 836 TVSK 839
> dre:561511 similar to tripartite motif-containing 35
Length=449
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 25/79 (31%)
Query 31 EQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKGACPV 87
E C VCC ++F + V C H +C+ CLQQ + TT CPV
Sbjct 8 EDLSCPVCC---------EIFKNPVVLSCSHSVCKECLQQYWRTKTT--------QECPV 50
Query 88 CQRSLTRGNYVLIEPDIDL 106
C+R ++G EP ++L
Sbjct 51 CRRRSSKG-----EPPVNL 64
> ath:AT5G13530 KEG; KEG (KEEP ON GOING); protein binding / protein
kinase/ ubiquitin-protein ligase
Length=1625
Score = 33.5 bits (75), Expect = 0.47, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 8/64 (12%)
Query 35 CSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLTR 94
CSVC T Y D+++ C H C++CL + F S++ CP C+
Sbjct 10 CSVCHTR--YNEDERVPLLLQCGHGFCKDCLSKMFS------TSSDTTLTCPRCRHVSVV 61
Query 95 GNYV 98
GN V
Sbjct 62 GNSV 65
> dre:799678 ret finger protein-like
Length=454
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 15/68 (22%)
Query 39 CTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLTRGNYV 98
C CC +F S C H C+ CLQQ + ST CPVC+R +R +
Sbjct 10 CPVCCEIFKDPVFLS--CSHSFCKKCLQQYW--------STTETEECPVCRRKSSRDD-- 57
Query 99 LIEPDIDL 106
P I+L
Sbjct 58 ---PPINL 62
> ath:AT4G30820 cyclin-dependent kinase-activating kinase assembly
factor-related / CDK-activating kinase assembly factor-related;
K10842 CDK-activating kinase assembly factor MAT1
Length=178
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 0/44 (0%)
Query 110 EKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIYELVYGTD 153
E +R+R++ N + F + YNDYLEE E +++L+ G +
Sbjct 13 EIHVRRRISEIYNRREEEFPSLKDYNDYLEEVECMVFDLIDGIN 56
> hsa:117854 TRIM6, RNF89; tripartite motif containing 6; K11999
tripartite motif-containing protein 6/22/34
Length=516
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query 37 VCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLTRGN 96
V C C + L S C H C+ C+ G VI + +CPVCQ S GN
Sbjct 41 VTCPICLELLTEPL--SIDCGHSFCQACITP---NGRESVIGQEGERSCPVCQTSYQPGN 95
Query 97 YVLIEPDIDLFSFEKQIRKRV 117
+ P+ L + +++R+ V
Sbjct 96 ---LRPNRHLANIVRRLREVV 113
> pfa:PFD0880w proteasome regulatory component, putative; K15030
translation initiation factor 3 subunit M
Length=429
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query 107 FSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEE------AIYELVYGTDEQLKRRL 160
F FE + + NN + + DN E+ +YN++ +E EE +I +L + + E+L
Sbjct 72 FVFETLVETKKNNKIKVIIDNKESVKSYNEFYKEVEEYFVILISILQLEFKSVEELNNAT 131
Query 161 ENRLRELEGHG 171
N ++ ++ +
Sbjct 132 NNFIKAIKNYN 142
> mmu:94088 Trim6, C430046K18Rik, D7Ertd684e; tripartite motif-containing
6; K11999 tripartite motif-containing protein 6/22/34
Length=488
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query 37 VCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLTRGN 96
V C C + L S C H C+ C+ G V + +CPVC+ S GN
Sbjct 13 VTCPICLELLTEPL--SIDCGHSFCQVCI---IGNSNNSVFGQGGRSSCPVCRTSYQPGN 67
Query 97 YVLIEPDIDLFSFEKQIRK 115
+ P+ L + K++R+
Sbjct 68 ---LRPNRHLAAIVKRLRE 83
> dre:557392 MGC136778, wu:fk35e05; zgc:136778
Length=460
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 20/69 (28%)
Query 31 EQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKGACPV 87
E+ C VCC ++F + V C H +C+ CLQQ + TT CPV
Sbjct 11 EELSCPVCC---------EIFRNPVLLSCSHSVCKECLQQYWRTKTT--------QECPV 53
Query 88 CQRSLTRGN 96
C+R +R +
Sbjct 54 CRRRSSRDD 62
> hsa:445372 TRIM6-TRIM34, IFP1, RNF21, TRIM34; TRIM6-TRIM34 readthrough;
K11999 tripartite motif-containing protein 6/22/34
Length=842
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query 56 CPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLTRGNYVLIEPDIDLFSFEKQIRK 115
C H C+ C+ G VI + +CPVCQ S GN + P+ L + +++R+
Sbjct 58 CGHSFCQACIT---PNGRESVIGQEGERSCPVCQTSYQPGN---LRPNRHLANIVRRLRE 111
Query 116 RV 117
V
Sbjct 112 VV 113
> ath:AT3G48030 hypoxia-responsive family protein / zinc finger
(C3HC4-type RING finger) family protein
Length=349
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 15/78 (19%)
Query 22 VFCWGSCTM---EQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVIS 78
VF +G+ T+ + ++C+VC + KL VC H +C+ +T
Sbjct 191 VFLYGNVTISLEQPFDCAVCLNE--FSDTDKLRLLPVCSHAFHLHCIDTWLLSNST---- 244
Query 79 TNAKGACPVCQRSLTRGN 96
CP+C+RSL+ N
Sbjct 245 ------CPLCRRSLSTSN 256
> cel:F22E12.4 egl-9; EGg Laying defective family member (egl-9)
Length=723
Score = 32.0 bits (71), Expect = 1.4, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query 20 RCVFCWGSCTMEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVIST 79
+C +C SCT Q + + C YC+ K+ D H++ LQ T+G++ +
Sbjct 38 QCTYCGSSCTSSQLQTCLFCGTVAYCS-KEHQQLDWLTHKMICKSLQ------TSGMVPS 90
Query 80 N 80
N
Sbjct 91 N 91
> dre:563772 trim54, si:dkey-221h15.2; tripartite motif-containing
54; K10653 tripartite motif-containing protein 54
Length=433
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 76/209 (36%), Gaps = 59/209 (28%)
Query 27 SCTMEQYECSVCCTNCCYCADKKLFSSDV----CPHRLCENCLQQQFGGG-------TTG 75
S +ME E + C C ++FS V C H LC C F +
Sbjct 14 SSSMENLERQLICPICL-----EIFSKPVVILPCQHNLCRKCANDVFQASNPLWQNRAST 68
Query 76 VISTNAKGACPVCQRSLT---RGNY-----VLIEPDIDLFSFE----------------- 110
+ST + CP C+ + G Y +L+E ID++ E
Sbjct 69 TVSTGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKSESTRPLLPKTEQQQLMCD 128
Query 111 KQIRKRVN--------------NALNALRD-NFENTPA-YNDYLEEKEEAIYELVYGTD- 153
+ +++N A +D + P Y E +AI LV G D
Sbjct 129 QHEEEKINIYCLTCETPTCSMCKVFGAHKDCDVAPLPVIYKKQKTELSDAIAILVAGNDS 188
Query 154 -EQLKRRLENRLRELEGHGRAQPQHVQQK 181
+ L ++E+ R ++ +GR Q QH+ K
Sbjct 189 IQALISQMEDICRSIKDNGRRQIQHISDK 217
> tpv:TP04_0829 hypothetical protein; K10695 E3 ubiquitin-protein
ligase RNF1/2 [EC:6.3.2.19]
Length=301
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 63/154 (40%), Gaps = 39/154 (25%)
Query 31 EQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQR 90
E+ C++C C K C HR C NC+++ GT G CP C++
Sbjct 54 EELTCAICSGIISKCVVIK-----TCLHRFCSNCIEKCVRVGTRG---------CPKCRK 99
Query 91 SLTRGNYVLIEP-----------DIDLF-----SFEKQIRKRVNN--ALNALRDNF--EN 130
+ + +P ++++F +F I K + N +N +R + EN
Sbjct 100 HVPSRRFFRTDPIYDSLISRIITNVEVFEELSDTFTMAINKGMKNDPTINTIRSKYLNEN 159
Query 131 TPAYNDYLEEKEEAIYELVYGTDEQLKRRLENRL 164
D+L++ E ++ D L+ + +N++
Sbjct 160 PTIRIDHLKQVGE-----LHEGDFSLESKFDNKV 188
> dre:100004944 ret finger protein 2-like
Length=600
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query 27 SCTMEQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKG 83
+ ++E C VC +++F V C H C+ CLQQ + +T
Sbjct 5 NSSLESLSCPVC---------REIFKIPVLLSCSHNFCKECLQQFW--------ATTKTQ 47
Query 84 ACPVCQRSLTRGNYVLIEPDIDL 106
CPVC+R ++ EP IDL
Sbjct 48 DCPVCRRRSSK-----YEPPIDL 65
> hsa:10206 TRIM13, CAR, DLEU5, LEU5, RFP2, RNF77; tripartite
motif containing 13; K12003 tripartite motif-containing protein
13
Length=410
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query 29 TMEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVC 88
ME E + C CC D C H C+ CL+ G + A CP C
Sbjct 3 VMELLEEDLTCPICCSLFDDPRVLP--CSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTC 60
Query 89 QR 90
++
Sbjct 61 RK 62
> dre:561314 similar to tripartite motif-containing 35; K12012
tripartite motif-containing protein 35
Length=458
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 20/66 (30%)
Query 29 TMEQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKGAC 85
+ E+ C VCC ++F + V C H +C+ CLQQ + TT C
Sbjct 7 SAEELSCPVCC---------EIFRNPVVLSCSHSVCKECLQQFWRTKTT--------QEC 49
Query 86 PVCQRS 91
PVC++S
Sbjct 50 PVCRKS 55
> dre:561381 similar to tripartite motif-containing 35; K12012
tripartite motif-containing protein 35
Length=451
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 25/81 (30%)
Query 29 TMEQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKGAC 85
++ C VCC ++F + V C H +C+ CLQQ +G T C
Sbjct 6 VFKELSCPVCC---------EIFKNPVVLSCSHSVCKECLQQFWGTKNT--------QEC 48
Query 86 PVCQRSLTRGNYVLIEPDIDL 106
PVC+R ++ EP + L
Sbjct 49 PVCRRRSSKE-----EPPVSL 64
> dre:393500 MGC66440, deltex3, dtx3, wu:fi25g12; zgc:66440; K06058
deltex
Length=290
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 51/137 (37%), Gaps = 30/137 (21%)
Query 1 KAVDFPAYFVVYIQQKNFWRCVFCWGSCTMEQYECSVCCTNCCYCADKKLFSSDVCPHRL 60
K+ D V+ +QQ+ R V C E E +VC + C + + D C H
Sbjct 72 KSADMDTCVVLPMQQEASARTVSELVVCHEE--ESTVC--SICMGEMVEKTTLDKCGHAF 127
Query 61 CENCLQQQFGGGTTGVISTNAKGACPVCQRSLTRGNYVLIEPDIDLFSFEKQIRKRVNNA 120
C +CL+Q F K ACPVC+ L G + +P N +
Sbjct 128 CRSCLEQAF----------QVKKACPVCR--LVYGQLIGNQP--------------ANGS 161
Query 121 LNALRDNFENTPAYNDY 137
+ RD P + Y
Sbjct 162 MMVERDPDLELPGHEGY 178
> mmu:20128 Trim30a, Rpt-1, Rpt1, Trim30; tripartite motif-containing
30A
Length=496
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
Query 26 GSCTMEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGAC 85
S +E + V C C K+ S+D C H C C+ + +T+ KG C
Sbjct 2 ASSVLEMIKEEVTCPICLELL-KEPVSAD-CNHSFCRACITLNYESNR----NTDGKGNC 55
Query 86 PVCQRSLTRGNYVLIEPDIDLFSFEKQIR 114
PVC+ GN + P++ + + ++++
Sbjct 56 PVCRVPYPFGN---LRPNLHVANIVERLK 81
> tpv:TP04_0515 hypothetical protein
Length=309
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query 31 EQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQR 90
+ +EC +C N Y K + +S C H C+ C+ Q + ++ CP+C+
Sbjct 5 KDFECPICF-NILY---KPVTTS--CGHNFCKFCIDQ----------AIHSSPNCPLCRI 48
Query 91 SLTR---GNYVLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYN 135
L+ N +L + + F E Q R + N ++++ +N+P YN
Sbjct 49 PLSSQYSPNLLLTQLINERFKDEIQSRHPSKISFNEVQNSMQNSPDYN 96
> dre:100008070 ns:zf-e68
Length=1935
Score = 30.0 bits (66), Expect = 5.1, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query 116 RVNNALNALRDNFENTPA-YNDYLEEKEEAIYELVYGTD------EQLKRRLENRLRELE 168
R N L+A R + + LEEKE + +L G E+LKR++E +
Sbjct 1270 RQINDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEAKNAL 1329
Query 169 GHGRAQPQHVQQKQQQQQQQNSEARAALR 197
H +H ++Q ++ EA+A L+
Sbjct 1330 AHAVQSARHDCDLLREQFEEEQEAKAELQ 1358
> dre:799300 myhz1.2, ns:zf-e523, si:ch211-158m24.8; myosin, heavy
polypeptide 1.2, skeletal muscle
Length=1935
Score = 30.0 bits (66), Expect = 5.1, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query 119 NALNALRDNFENTPA-YNDYLEEKEEAIYELVYGTD------EQLKRRLENRLRELEGHG 171
N L+A R + + LEEKE + +L G E+LKR++E + H
Sbjct 1273 NDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEAKNALAHA 1332
Query 172 RAQPQHVQQKQQQQQQQNSEARAALR 197
+H ++Q ++ EA+A L+
Sbjct 1333 VQSARHDCDLLREQFEEEQEAKAELQ 1358
> dre:492475 zgc:103481
Length=381
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 20/73 (27%)
Query 27 SCTMEQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKG 83
+ ++E + C VCC K++ V C H C+ CLQ+ + T
Sbjct 6 TVSVEHFSCPVCC---------KIYKDPVVLSCSHSFCQECLQKFWITCNT--------L 48
Query 84 ACPVCQRSLTRGN 96
CPVC+R +R +
Sbjct 49 ECPVCRRRSSRDD 61
> dre:100330078 ret finger protein-like; K12012 tripartite motif-containing
protein 35
Length=459
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 20/70 (28%)
Query 29 TMEQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKGAC 85
+ ++ C VCC ++F + V C H +C+ CLQQ + TT C
Sbjct 7 SADELSCPVCC---------EIFKNPVLLSCSHSVCKECLQQFWRTKTT--------QEC 49
Query 86 PVCQRSLTRG 95
PVC+R ++
Sbjct 50 PVCRRRSSKS 59
> dre:100002502 tripartite motif protein 21-like
Length=459
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 13/58 (22%)
Query 42 CCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLTRGN 96
C C D +F + V C H C+ CLQQ + T CPVC+R ++G+
Sbjct 11 CPVCQD--IFKTPVILSCSHSFCQECLQQFWRSKNT--------QECPVCRRRSSKGH 58
> dre:558883 tprb, si:dkey-97o5.5, tpr, wu:fi76g05; translocated
promoter region b (to activated MET oncogene); K09291 nucleoprotein
TPR
Length=2352
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 0/63 (0%)
Query 135 NDYLEEKEEAIYELVYGTDEQLKRRLENRLRELEGHGRAQPQHVQQKQQQQQQQNSEARA 194
N+ L++++E + V Q + RL + REL Q +H +Q+ + Q+Q +S+ +
Sbjct 1582 NEELKQQKEELEVRVSALKSQYEGRLSRQERELRDLREQQERHGEQRDEPQEQGSSKTQE 1641
Query 195 ALR 197
R
Sbjct 1642 PQR 1644
> dre:562814 si:ch211-284p22.1
Length=458
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 20/65 (30%)
Query 29 TMEQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKGAC 85
+ ++ C VCC ++F + V C H +C+ CLQQ + TT C
Sbjct 7 SADELSCPVCC---------EIFKNPVLLSCSHSVCKECLQQFWRTKTT--------LEC 49
Query 86 PVCQR 90
PVC+R
Sbjct 50 PVCRR 54
> dre:555877 btr31; bloodthirsty-related gene family, member 31
Length=341
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 42/135 (31%)
Query 26 GSCTM-EQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNA 81
SC + E+ +CS+C +F+ V C H C CL Q + TN
Sbjct 3 SSCGLNEELQCSICL---------DVFTDPVTTPCGHNFCRTCLDQYW---------TNT 44
Query 82 KG-ACPVCQRSLTRGNYVLIEPDIDLFSFEKQIRKRVNNALNALRDNF--ENTPAYNDYL 138
CP+C+ F KQ +VN AL + ++ E+ PA ++ +
Sbjct 45 HTCCCPICKE-----------------KFSKQPDLKVNIALREVVEHLKQESRPAESETM 87
Query 139 EEKEEAIYELVYGTD 153
E++ + I E+ + D
Sbjct 88 EDRLKKIQEINHSED 102
> dre:557841 zgc:172266
Length=447
Score = 29.3 bits (64), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 20/73 (27%)
Query 27 SCTMEQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKG 83
S ++++ C +CC ++F S + C H C+ C+QQ + T
Sbjct 3 SLSVKEISCPICC---------EIFKSPILLSCSHSFCKECIQQFW--------RTKISR 45
Query 84 ACPVCQRSLTRGN 96
CPVC+R ++ +
Sbjct 46 ECPVCRRRSSKDD 58
> hsa:79784 MYH14, DFNA4, DKFZp667A1311, FLJ13881, FLJ43092, KIAA2034,
MHC16, MYH17, NMHC-II-C, myosin; myosin, heavy chain
14, non-muscle (EC:3.6.4.1); K10352 myosin heavy chain
Length=2003
Score = 29.3 bits (64), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query 99 LIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPA-YNDYLEEKEEAIYELVYGTDEQLK 157
L+E + FS + + +LN LR +E T A D L ++E+ EL E+LK
Sbjct 1028 LLEDRLAEFSSQAAEEEEKVKSLNKLRLKYEATIADMEDRLRKEEKGRQEL-----EKLK 1082
Query 158 RRLENRLRELEGHGRAQPQHVQQKQQQQQQQNSEARAAL 196
RRL+ EL+ Q Q ++ + Q ++ E +AAL
Sbjct 1083 RRLDGESSELQEQMVEQQQRAEELRAQLGRKEEELQAAL 1121
> ath:AT1G57820 VIM1; VIM1 (VARIANT IN METHYLATION 1); DNA binding
/ chromatin binding / double-stranded methylated DNA binding
/ histone binding / methyl-CpG binding / methyl-CpNpG
binding / methyl-CpNpN binding / ubiquitin-protein ligase
Length=645
Score = 29.3 bits (64), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 13/110 (11%)
Query 56 CPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLTRGNYVLIEP----DIDLFSFEK 111
C H C+ CL+ +F G T ++ + G R+L VL P DI F
Sbjct 533 CAHNFCKACLEAKFAGKT--LVRERSTGG-----RTLRSRKNVLNCPCCPTDISDFLQNP 585
Query 112 QIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIYELVYGTDEQLKRRLE 161
Q+ + V + L+ E+T D E++ E EQ K+R++
Sbjct 586 QVNREVAEVIEKLKTQEEDTAELED--EDEGECSGTTPEEDSEQPKKRIK 633
> dre:414846 rnf141, zgc:86917; ring finger protein 141
Length=222
Score = 29.3 bits (64), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 10/62 (16%)
Query 42 CCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLTRGNYVLIE 101
CC C D K C H C+ C+ + G CPVC+ +T N +
Sbjct 147 CCICMDGKADLILPCAHSFCQKCIDKWSGQSRN----------CPVCRIQVTAANESWVM 196
Query 102 PD 103
D
Sbjct 197 SD 198
Lambda K H
0.322 0.135 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 5931269072
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40