bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_966 164,496 sequences; 82,071,388 total letters Query= Eace_0391_orf1 Length=199 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_120070 CDK-activating kinase assembly factor, putat... 141 1e-33 pfa:PFE0610c CDK-activating kinase assembly factor, putative; ... 85.9 8e-17 cpv:cgd1_3300 ring domain protein ; K10842 CDK-activating kina... 84.0 3e-16 tpv:TP02_0520 hypothetical protein; K10842 CDK-activating kina... 82.4 9e-16 sce:YDR460W TFB3, RIG2; Subunit of TFIIH and nucleotide excisi... 59.3 8e-09 mmu:17420 Mnat1, E130115E11Rik, MAT1, P36; menage a trois 1; K... 57.0 4e-08 hsa:4331 MNAT1, CAP35, MAT1, RNF66, TFB3; menage a trois homol... 55.8 1e-07 cel:F53G2.7 mnat-1; MNAT (menage a trois) TFIIH subunit family... 54.3 2e-07 xla:380053 mnat1, MAT1, MGC64497; menage a trois 1; K10842 CDK... 53.9 4e-07 dre:450080 mnat1, zgc:101599; menage a trois homolog 1; K10842... 50.1 5e-06 cel:T05A12.4 hypothetical protein 36.6 0.066 bbo:BBOV_II005680 18.m06472; hypothetical protein 36.2 0.076 sce:YDL058W USO1, INT1; Essential protein involved in the vesi... 35.4 0.13 ath:AT5G22750 RAD5; RAD5; ATP binding / ATP-dependent helicase... 34.7 0.21 dre:561511 similar to tripartite motif-containing 35 34.7 ath:AT5G13530 KEG; KEG (KEEP ON GOING); protein binding / prot... 33.5 0.47 dre:799678 ret finger protein-like 33.5 0.54 ath:AT4G30820 cyclin-dependent kinase-activating kinase assemb... 33.5 0.54 hsa:117854 TRIM6, RNF89; tripartite motif containing 6; K11999... 32.7 0.88 pfa:PFD0880w proteasome regulatory component, putative; K15030... 32.7 0.89 mmu:94088 Trim6, C430046K18Rik, D7Ertd684e; tripartite motif-c... 32.7 0.95 dre:557392 MGC136778, wu:fk35e05; zgc:136778 32.3 0.98 hsa:445372 TRIM6-TRIM34, IFP1, RNF21, TRIM34; TRIM6-TRIM34 rea... 32.3 1.0 ath:AT3G48030 hypoxia-responsive family protein / zinc finger ... 32.3 1.2 cel:F22E12.4 egl-9; EGg Laying defective family member (egl-9) 32.0 1.4 dre:563772 trim54, si:dkey-221h15.2; tripartite motif-containi... 31.6 2.1 tpv:TP04_0829 hypothetical protein; K10695 E3 ubiquitin-protei... 31.2 2.3 dre:100004944 ret finger protein 2-like 31.2 2.4 hsa:10206 TRIM13, CAR, DLEU5, LEU5, RFP2, RNF77; tripartite mo... 31.2 2.7 dre:561314 similar to tripartite motif-containing 35; K12012 t... 30.8 3.4 dre:561381 similar to tripartite motif-containing 35; K12012 t... 30.8 3.6 dre:393500 MGC66440, deltex3, dtx3, wu:fi25g12; zgc:66440; K06... 30.8 3.6 mmu:20128 Trim30a, Rpt-1, Rpt1, Trim30; tripartite motif-conta... 30.4 4.5 tpv:TP04_0515 hypothetical protein 30.0 5.0 dre:100008070 ns:zf-e68 30.0 5.1 dre:799300 myhz1.2, ns:zf-e523, si:ch211-158m24.8; myosin, hea... 30.0 5.1 dre:492475 zgc:103481 30.0 5.3 dre:100330078 ret finger protein-like; K12012 tripartite motif... 30.0 5.8 dre:100002502 tripartite motif protein 21-like 30.0 5.9 dre:558883 tprb, si:dkey-97o5.5, tpr, wu:fi76g05; translocated... 29.6 6.3 dre:562814 si:ch211-284p22.1 29.6 8.1 dre:555877 btr31; bloodthirsty-related gene family, member 31 29.3 dre:557841 zgc:172266 29.3 8.8 hsa:79784 MYH14, DFNA4, DKFZp667A1311, FLJ13881, FLJ43092, KIA... 29.3 8.8 ath:AT1G57820 VIM1; VIM1 (VARIANT IN METHYLATION 1); DNA bindi... 29.3 9.5 dre:414846 rnf141, zgc:86917; ring finger protein 141 29.3 > tgo:TGME49_120070 CDK-activating kinase assembly factor, putative (EC:1.14.16.4); K10842 CDK-activating kinase assembly factor MAT1 Length=279 Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 70/163 (42%), Positives = 106/163 (65%), Gaps = 8/163 (4%) Query 30 MEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFG-GGTTGVISTNAKGACPVC 88 M+ Y+C VC +C + ++KLF SDVC HR+C +CL FG G G +G CPVC Sbjct 1 MDNYDCPVCYESCYFHPERKLFHSDVCKHRICGSCLHIHFGENGARG----ERRGFCPVC 56 Query 89 QRSLTRGNYVLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIYEL 148 + SLTR NY +PD+++ EK+IR+RV N+ R+ F +TPAY+DY E+KE+ +Y+L Sbjct 57 RTSLTRANYKETDPDMEVLETEKEIRRRVEAIYNSTRERFPDTPAYDDYREKKEDIVYQL 116 Query 149 VYGTDEQLKRRLENRLRELEGHGRAQPQHVQQKQQQQQQQNSE 191 V G+DE +KR+LE LR E R + +Q+ +++++Q+ E Sbjct 117 VSGSDEAVKRKLEAELRAYE---RQNLKLIQENKEERKQREKE 156 > pfa:PFE0610c CDK-activating kinase assembly factor, putative; K10842 CDK-activating kinase assembly factor MAT1 Length=260 Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 77/139 (55%), Gaps = 8/139 (5%) Query 30 MEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQ 89 M++Y+C C + +KKL+ D+C H++C CL+ K CP+C+ Sbjct 1 MDEYKCISCFEDIYVNNEKKLYFFDICKHKICGECLENHLNKLN--------KQYCPLCK 52 Query 90 RSLTRGNYVLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIYELV 149 S+T+ N L + + +++ +K +R ++ N R NFENTP YN+YLE+ E+ IY L Sbjct 53 VSVTKKNVSLFDIEERIYANQKNVRSKLTEIFNKRRHNFENTPLYNNYLEKVEDMIYVLT 112 Query 150 YGTDEQLKRRLENRLRELE 168 DE+ ++ +E +++ E Sbjct 113 NECDEKKRKIIEAYIKKYE 131 > cpv:cgd1_3300 ring domain protein ; K10842 CDK-activating kinase assembly factor MAT1 Length=296 Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 1/127 (0%) Query 31 EQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQR 90 +QY C +C T+ Y D K++ D C H+ C C + + I + CPVC Sbjct 11 KQYSCPLCMTSTYYKNDIKMYYGDPCGHKFCSECSTKANNNKKSTSILRGSNQICPVCH- 69 Query 91 SLTRGNYVLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIYELVY 150 + + D FE Q RK+V LN R +F++TP Y++YLE++E+ IY+L+Y Sbjct 70 GFVKYIADFEYGETDFLKFESQARKQVYTILNETRKDFKDTPCYDNYLEKREDLIYKLIY 129 Query 151 GTDEQLK 157 G D + K Sbjct 130 GNDTEKK 136 > tpv:TP02_0520 hypothetical protein; K10842 CDK-activating kinase assembly factor MAT1 Length=245 Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 7/132 (5%) Query 34 ECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLT 93 EC +C +DK L SD+C H++C+ C ++Q S + C +C+ LT Sbjct 4 ECPICLEIITPSSDKILLVSDICDHKICDGCAEKQLS-------SQGSYTQCAICRCHLT 56 Query 94 RGNYVLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIYELVYGTD 153 R ++V + + + K RKRV N R NF+ TP YN YLE++E I+EL D Sbjct 57 RHSFVPYDMSSNYYEQHKDARKRVLQVYNDTRINFKTTPEYNKYLEDREAIIFELTNSKD 116 Query 154 EQLKRRLENRLR 165 E + +E LR Sbjct 117 ESRLKSIEQELR 128 > sce:YDR460W TFB3, RIG2; Subunit of TFIIH and nucleotide excision repair factor 3 complexes, involved in transcription initiation, required for nucleotide excision repair; ring finger protein similar to mammalian CAK and TFIIH subunit; K10842 CDK-activating kinase assembly factor MAT1 Length=321 Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 64/133 (48%), Gaps = 19/133 (14%) Query 30 MEQYE-----CSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGA 84 M++YE C +C T+ D K + C HR+CE+C+ + F G Sbjct 3 MDEYEENKDMCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGP---------AQ 53 Query 85 CPV--CQRSLTRGNY-VLIEPDIDLFSFEKQIRKRVNNALNALRDNFE-NTPAYNDYLEE 140 CP C + L + + I D+++ E IRKRV N N D+F + YN YLEE Sbjct 54 CPYKGCDKILRKNKFKTQIFDDVEV-EKEVDIRKRVFNVFNKTIDDFNGDLVEYNKYLEE 112 Query 141 KEEAIYELVYGTD 153 E+ IY+L +G D Sbjct 113 VEDIIYKLDHGID 125 > mmu:17420 Mnat1, E130115E11Rik, MAT1, P36; menage a trois 1; K10842 CDK-activating kinase assembly factor MAT1 Length=309 Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 17/136 (12%) Query 30 MEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQ 89 M+ C C T KL +VC H LCE+C+ F G G CP C Sbjct 1 MDDQGCPRCKTTKYRNPSLKLMV-NVCGHTLCESCVDLLFVRGA---------GNCPECG 50 Query 90 RSLTRGNY---VLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIY 146 L + N+ + +P +D E +IRK+V N ++F + YND+LEE EE ++ Sbjct 51 TPLRKSNFRVQLFEDPTVDK---EVEIRKKVLKIYNKREEDFPSLREYNDFLEEVEEIVF 107 Query 147 ELVYGTD-EQLKRRLE 161 L D E K+++E Sbjct 108 NLTNNVDLENTKKKME 123 > hsa:4331 MNAT1, CAP35, MAT1, RNF66, TFB3; menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis); K10842 CDK-activating kinase assembly factor MAT1 Length=267 Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 17/136 (12%) Query 30 MEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQ 89 M+ C C T KL +VC H LCE+C+ F G G CP C Sbjct 1 MDDQGCPRCKTTKYRNPSLKLMV-NVCGHTLCESCVDLLFVRGA---------GNCPECG 50 Query 90 RSLTRGNY---VLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIY 146 L + N+ + +P +D E +IRK+V N ++F + YND+LEE EE ++ Sbjct 51 TPLRKSNFRVQLFEDPTVDK---EVEIRKKVLKIYNKREEDFPSLREYNDFLEEVEEIVF 107 Query 147 ELVYGTD-EQLKRRLE 161 L D + K+++E Sbjct 108 NLTNNVDLDNTKKKME 123 > cel:F53G2.7 mnat-1; MNAT (menage a trois) TFIIH subunit family member (mnat-1); K10842 CDK-activating kinase assembly factor MAT1 Length=310 Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 16/123 (13%) Query 34 ECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLT 93 EC C +N Y + + + C H LC+NC+ F + G C VC R L Sbjct 3 ECKKCKSNE-YTNKQLVMMINECGHPLCKNCVDNIFALNS---------GNCHVCNRVLR 52 Query 94 RGNY---VLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIYELVY 150 + N+ + +P ID +F +R+++ N +D+FEN + DY E E +Y LV+ Sbjct 53 KNNFREQIYEDPLIDKETF---LRRKLRKIYNLKQDDFENLREFGDYQERFETVVYNLVF 109 Query 151 GTD 153 T+ Sbjct 110 ETN 112 > xla:380053 mnat1, MAT1, MGC64497; menage a trois 1; K10842 CDK-activating kinase assembly factor MAT1 Length=309 Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 16/133 (12%) Query 30 MEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQ 89 M+ C C T KL +VC H LCE+C++ F G+ G+C C Sbjct 1 MDDQGCPRCKTTKYRNPSLKLMV-NVCGHTLCESCVELLFVRGS---------GSCQECD 50 Query 90 RSLTRGNY---VLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIY 146 L + N+ + +P ID E +IRK++ N ++F + YND+LEE EE + Sbjct 51 TPLRKSNFKVQLFEDPTIDK---EVEIRKKILKIYNKREEDFPSLREYNDFLEEIEEIVL 107 Query 147 ELVYGTDEQLKRR 159 L D RR Sbjct 108 NLTNNVDLDNTRR 120 > dre:450080 mnat1, zgc:101599; menage a trois homolog 1; K10842 CDK-activating kinase assembly factor MAT1 Length=309 Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 11/138 (7%) Query 30 MEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQ 89 M+ C C T KL +VC H LCE+C+ F G+ G C C Sbjct 1 MDDQGCPRCKTTKYRNPSLKLMV-NVCGHTLCESCVDMLFVRGS---------GNCVQCD 50 Query 90 RSLTRGNYVLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIYELV 149 L + N+ + + E +IRK+V N +F + YNDYLE+ E+ ++ L Sbjct 51 TPLRKSNFRVQLFEDPAIGKEVEIRKKVLKIYNKREFDFSSLTEYNDYLEQVEDIVFNLA 110 Query 150 YGTD-EQLKRRLENRLRE 166 D E K+++E R+ Sbjct 111 NNMDVEMTKQKMEQYQRD 128 > cel:T05A12.4 hypothetical protein Length=1622 Score = 36.6 bits (83), Expect = 0.066, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 18/77 (23%) Query 29 TMEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQ-----QQFGGGTTGVISTNAKG 83 T + ++C +CC A F C HR+C+NC + Q+ G V+ Sbjct 1340 TEDIFDCPICC------ASIDCFMVFTCGHRICQNCFEKMRALQRRAGSAEDVV------ 1387 Query 84 ACPVCQRSLTRGNYVLI 100 ACP C R + R V++ Sbjct 1388 ACPTC-RVVNRSKQVMV 1403 > bbo:BBOV_II005680 18.m06472; hypothetical protein Length=175 Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 0/53 (0%) Query 122 NALRDNFENTPAYNDYLEEKEEAIYELVYGTDEQLKRRLENRLRELEGHGRAQ 174 N R NF++TP YN +LE++E + L YG + + + L+ E A+ Sbjct 33 NDTRSNFKDTPDYNAFLEKRENLVINLTYGRSDPRWEQADAELKAYESQNAAK 85 > sce:YDL058W USO1, INT1; Essential protein involved in the vesicle-mediated ER to Golgi transport step of secretion; binds membranes and functions during vesicle docking to the Golgi; required for assembly of the ER-to-Golgi SNARE complex Length=1790 Score = 35.4 bits (80), Expect = 0.13, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 9/89 (10%) Query 111 KQIRKRVNNALNALRDNFENTPAYNDYLE--EKEEAIYELVYGTDEQLKRRLENRLRELE 168 + +++ +NNA +R N E LE E+E + ++++ K L +RL+ELE Sbjct 1585 ETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKELLTSRLKELE 1644 Query 169 GHGRAQPQHVQQKQQQQQQQNSEARAALR 197 Q + QQ+ Q+ E RA +R Sbjct 1645 -------QELDSTQQKAQKSEEERRAEVR 1666 > ath:AT5G22750 RAD5; RAD5; ATP binding / ATP-dependent helicase/ DNA binding / helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / protein binding / zinc ion binding Length=1029 Score = 34.7 bits (78), Expect = 0.21, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 14/64 (21%) Query 31 EQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQR 90 EQ EC +C D L C HRLC CL + T+G+ CPVC+ Sbjct 790 EQGECPICLEAL---EDAVLTP---CAHRLCRECLLASWRNSTSGL--------CPVCRN 835 Query 91 SLTR 94 ++++ Sbjct 836 TVSK 839 > dre:561511 similar to tripartite motif-containing 35 Length=449 Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 25/79 (31%) Query 31 EQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKGACPV 87 E C VCC ++F + V C H +C+ CLQQ + TT CPV Sbjct 8 EDLSCPVCC---------EIFKNPVVLSCSHSVCKECLQQYWRTKTT--------QECPV 50 Query 88 CQRSLTRGNYVLIEPDIDL 106 C+R ++G EP ++L Sbjct 51 CRRRSSKG-----EPPVNL 64 > ath:AT5G13530 KEG; KEG (KEEP ON GOING); protein binding / protein kinase/ ubiquitin-protein ligase Length=1625 Score = 33.5 bits (75), Expect = 0.47, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 8/64 (12%) Query 35 CSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLTR 94 CSVC T Y D+++ C H C++CL + F S++ CP C+ Sbjct 10 CSVCHTR--YNEDERVPLLLQCGHGFCKDCLSKMFS------TSSDTTLTCPRCRHVSVV 61 Query 95 GNYV 98 GN V Sbjct 62 GNSV 65 > dre:799678 ret finger protein-like Length=454 Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 15/68 (22%) Query 39 CTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLTRGNYV 98 C CC +F S C H C+ CLQQ + ST CPVC+R +R + Sbjct 10 CPVCCEIFKDPVFLS--CSHSFCKKCLQQYW--------STTETEECPVCRRKSSRDD-- 57 Query 99 LIEPDIDL 106 P I+L Sbjct 58 ---PPINL 62 > ath:AT4G30820 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related; K10842 CDK-activating kinase assembly factor MAT1 Length=178 Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust. Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 0/44 (0%) Query 110 EKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIYELVYGTD 153 E +R+R++ N + F + YNDYLEE E +++L+ G + Sbjct 13 EIHVRRRISEIYNRREEEFPSLKDYNDYLEEVECMVFDLIDGIN 56 > hsa:117854 TRIM6, RNF89; tripartite motif containing 6; K11999 tripartite motif-containing protein 6/22/34 Length=516 Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 8/81 (9%) Query 37 VCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLTRGN 96 V C C + L S C H C+ C+ G VI + +CPVCQ S GN Sbjct 41 VTCPICLELLTEPL--SIDCGHSFCQACITP---NGRESVIGQEGERSCPVCQTSYQPGN 95 Query 97 YVLIEPDIDLFSFEKQIRKRV 117 + P+ L + +++R+ V Sbjct 96 ---LRPNRHLANIVRRLREVV 113 > pfa:PFD0880w proteasome regulatory component, putative; K15030 translation initiation factor 3 subunit M Length=429 Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust. Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 6/71 (8%) Query 107 FSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEE------AIYELVYGTDEQLKRRL 160 F FE + + NN + + DN E+ +YN++ +E EE +I +L + + E+L Sbjct 72 FVFETLVETKKNNKIKVIIDNKESVKSYNEFYKEVEEYFVILISILQLEFKSVEELNNAT 131 Query 161 ENRLRELEGHG 171 N ++ ++ + Sbjct 132 NNFIKAIKNYN 142 > mmu:94088 Trim6, C430046K18Rik, D7Ertd684e; tripartite motif-containing 6; K11999 tripartite motif-containing protein 6/22/34 Length=488 Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Query 37 VCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLTRGN 96 V C C + L S C H C+ C+ G V + +CPVC+ S GN Sbjct 13 VTCPICLELLTEPL--SIDCGHSFCQVCI---IGNSNNSVFGQGGRSSCPVCRTSYQPGN 67 Query 97 YVLIEPDIDLFSFEKQIRK 115 + P+ L + K++R+ Sbjct 68 ---LRPNRHLAAIVKRLRE 83 > dre:557392 MGC136778, wu:fk35e05; zgc:136778 Length=460 Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 20/69 (28%) Query 31 EQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKGACPV 87 E+ C VCC ++F + V C H +C+ CLQQ + TT CPV Sbjct 11 EELSCPVCC---------EIFRNPVLLSCSHSVCKECLQQYWRTKTT--------QECPV 53 Query 88 CQRSLTRGN 96 C+R +R + Sbjct 54 CRRRSSRDD 62 > hsa:445372 TRIM6-TRIM34, IFP1, RNF21, TRIM34; TRIM6-TRIM34 readthrough; K11999 tripartite motif-containing protein 6/22/34 Length=842 Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 6/62 (9%) Query 56 CPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLTRGNYVLIEPDIDLFSFEKQIRK 115 C H C+ C+ G VI + +CPVCQ S GN + P+ L + +++R+ Sbjct 58 CGHSFCQACIT---PNGRESVIGQEGERSCPVCQTSYQPGN---LRPNRHLANIVRRLRE 111 Query 116 RV 117 V Sbjct 112 VV 113 > ath:AT3G48030 hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein Length=349 Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 15/78 (19%) Query 22 VFCWGSCTM---EQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVIS 78 VF +G+ T+ + ++C+VC + KL VC H +C+ +T Sbjct 191 VFLYGNVTISLEQPFDCAVCLNE--FSDTDKLRLLPVCSHAFHLHCIDTWLLSNST---- 244 Query 79 TNAKGACPVCQRSLTRGN 96 CP+C+RSL+ N Sbjct 245 ------CPLCRRSLSTSN 256 > cel:F22E12.4 egl-9; EGg Laying defective family member (egl-9) Length=723 Score = 32.0 bits (71), Expect = 1.4, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 7/61 (11%) Query 20 RCVFCWGSCTMEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVIST 79 +C +C SCT Q + + C YC+ K+ D H++ LQ T+G++ + Sbjct 38 QCTYCGSSCTSSQLQTCLFCGTVAYCS-KEHQQLDWLTHKMICKSLQ------TSGMVPS 90 Query 80 N 80 N Sbjct 91 N 91 > dre:563772 trim54, si:dkey-221h15.2; tripartite motif-containing 54; K10653 tripartite motif-containing protein 54 Length=433 Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust. Identities = 48/209 (22%), Positives = 76/209 (36%), Gaps = 59/209 (28%) Query 27 SCTMEQYECSVCCTNCCYCADKKLFSSDV----CPHRLCENCLQQQFGGG-------TTG 75 S +ME E + C C ++FS V C H LC C F + Sbjct 14 SSSMENLERQLICPICL-----EIFSKPVVILPCQHNLCRKCANDVFQASNPLWQNRAST 68 Query 76 VISTNAKGACPVCQRSLT---RGNY-----VLIEPDIDLFSFE----------------- 110 +ST + CP C+ + G Y +L+E ID++ E Sbjct 69 TVSTGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKSESTRPLLPKTEQQQLMCD 128 Query 111 KQIRKRVN--------------NALNALRD-NFENTPA-YNDYLEEKEEAIYELVYGTD- 153 + +++N A +D + P Y E +AI LV G D Sbjct 129 QHEEEKINIYCLTCETPTCSMCKVFGAHKDCDVAPLPVIYKKQKTELSDAIAILVAGNDS 188 Query 154 -EQLKRRLENRLRELEGHGRAQPQHVQQK 181 + L ++E+ R ++ +GR Q QH+ K Sbjct 189 IQALISQMEDICRSIKDNGRRQIQHISDK 217 > tpv:TP04_0829 hypothetical protein; K10695 E3 ubiquitin-protein ligase RNF1/2 [EC:6.3.2.19] Length=301 Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust. Identities = 33/154 (21%), Positives = 63/154 (40%), Gaps = 39/154 (25%) Query 31 EQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQR 90 E+ C++C C K C HR C NC+++ GT G CP C++ Sbjct 54 EELTCAICSGIISKCVVIK-----TCLHRFCSNCIEKCVRVGTRG---------CPKCRK 99 Query 91 SLTRGNYVLIEP-----------DIDLF-----SFEKQIRKRVNN--ALNALRDNF--EN 130 + + +P ++++F +F I K + N +N +R + EN Sbjct 100 HVPSRRFFRTDPIYDSLISRIITNVEVFEELSDTFTMAINKGMKNDPTINTIRSKYLNEN 159 Query 131 TPAYNDYLEEKEEAIYELVYGTDEQLKRRLENRL 164 D+L++ E ++ D L+ + +N++ Sbjct 160 PTIRIDHLKQVGE-----LHEGDFSLESKFDNKV 188 > dre:100004944 ret finger protein 2-like Length=600 Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 25/83 (30%) Query 27 SCTMEQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKG 83 + ++E C VC +++F V C H C+ CLQQ + +T Sbjct 5 NSSLESLSCPVC---------REIFKIPVLLSCSHNFCKECLQQFW--------ATTKTQ 47 Query 84 ACPVCQRSLTRGNYVLIEPDIDL 106 CPVC+R ++ EP IDL Sbjct 48 DCPVCRRRSSK-----YEPPIDL 65 > hsa:10206 TRIM13, CAR, DLEU5, LEU5, RFP2, RNF77; tripartite motif containing 13; K12003 tripartite motif-containing protein 13 Length=410 Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust. Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 2/62 (3%) Query 29 TMEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVC 88 ME E + C CC D C H C+ CL+ G + A CP C Sbjct 3 VMELLEEDLTCPICCSLFDDPRVLP--CSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTC 60 Query 89 QR 90 ++ Sbjct 61 RK 62 > dre:561314 similar to tripartite motif-containing 35; K12012 tripartite motif-containing protein 35 Length=458 Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 20/66 (30%) Query 29 TMEQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKGAC 85 + E+ C VCC ++F + V C H +C+ CLQQ + TT C Sbjct 7 SAEELSCPVCC---------EIFRNPVVLSCSHSVCKECLQQFWRTKTT--------QEC 49 Query 86 PVCQRS 91 PVC++S Sbjct 50 PVCRKS 55 > dre:561381 similar to tripartite motif-containing 35; K12012 tripartite motif-containing protein 35 Length=451 Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 25/81 (30%) Query 29 TMEQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKGAC 85 ++ C VCC ++F + V C H +C+ CLQQ +G T C Sbjct 6 VFKELSCPVCC---------EIFKNPVVLSCSHSVCKECLQQFWGTKNT--------QEC 48 Query 86 PVCQRSLTRGNYVLIEPDIDL 106 PVC+R ++ EP + L Sbjct 49 PVCRRRSSKE-----EPPVSL 64 > dre:393500 MGC66440, deltex3, dtx3, wu:fi25g12; zgc:66440; K06058 deltex Length=290 Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust. Identities = 35/137 (25%), Positives = 51/137 (37%), Gaps = 30/137 (21%) Query 1 KAVDFPAYFVVYIQQKNFWRCVFCWGSCTMEQYECSVCCTNCCYCADKKLFSSDVCPHRL 60 K+ D V+ +QQ+ R V C E E +VC + C + + D C H Sbjct 72 KSADMDTCVVLPMQQEASARTVSELVVCHEE--ESTVC--SICMGEMVEKTTLDKCGHAF 127 Query 61 CENCLQQQFGGGTTGVISTNAKGACPVCQRSLTRGNYVLIEPDIDLFSFEKQIRKRVNNA 120 C +CL+Q F K ACPVC+ L G + +P N + Sbjct 128 CRSCLEQAF----------QVKKACPVCR--LVYGQLIGNQP--------------ANGS 161 Query 121 LNALRDNFENTPAYNDY 137 + RD P + Y Sbjct 162 MMVERDPDLELPGHEGY 178 > mmu:20128 Trim30a, Rpt-1, Rpt1, Trim30; tripartite motif-containing 30A Length=496 Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust. Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 9/89 (10%) Query 26 GSCTMEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGAC 85 S +E + V C C K+ S+D C H C C+ + +T+ KG C Sbjct 2 ASSVLEMIKEEVTCPICLELL-KEPVSAD-CNHSFCRACITLNYESNR----NTDGKGNC 55 Query 86 PVCQRSLTRGNYVLIEPDIDLFSFEKQIR 114 PVC+ GN + P++ + + ++++ Sbjct 56 PVCRVPYPFGN---LRPNLHVANIVERLK 81 > tpv:TP04_0515 hypothetical protein Length=309 Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust. Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 19/108 (17%) Query 31 EQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQR 90 + +EC +C N Y K + +S C H C+ C+ Q + ++ CP+C+ Sbjct 5 KDFECPICF-NILY---KPVTTS--CGHNFCKFCIDQ----------AIHSSPNCPLCRI 48 Query 91 SLTR---GNYVLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYN 135 L+ N +L + + F E Q R + N ++++ +N+P YN Sbjct 49 PLSSQYSPNLLLTQLINERFKDEIQSRHPSKISFNEVQNSMQNSPDYN 96 > dre:100008070 ns:zf-e68 Length=1935 Score = 30.0 bits (66), Expect = 5.1, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 7/89 (7%) Query 116 RVNNALNALRDNFENTPA-YNDYLEEKEEAIYELVYGTD------EQLKRRLENRLRELE 168 R N L+A R + + LEEKE + +L G E+LKR++E + Sbjct 1270 RQINDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEAKNAL 1329 Query 169 GHGRAQPQHVQQKQQQQQQQNSEARAALR 197 H +H ++Q ++ EA+A L+ Sbjct 1330 AHAVQSARHDCDLLREQFEEEQEAKAELQ 1358 > dre:799300 myhz1.2, ns:zf-e523, si:ch211-158m24.8; myosin, heavy polypeptide 1.2, skeletal muscle Length=1935 Score = 30.0 bits (66), Expect = 5.1, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 7/86 (8%) Query 119 NALNALRDNFENTPA-YNDYLEEKEEAIYELVYGTD------EQLKRRLENRLRELEGHG 171 N L+A R + + LEEKE + +L G E+LKR++E + H Sbjct 1273 NDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEAKNALAHA 1332 Query 172 RAQPQHVQQKQQQQQQQNSEARAALR 197 +H ++Q ++ EA+A L+ Sbjct 1333 VQSARHDCDLLREQFEEEQEAKAELQ 1358 > dre:492475 zgc:103481 Length=381 Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 20/73 (27%) Query 27 SCTMEQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKG 83 + ++E + C VCC K++ V C H C+ CLQ+ + T Sbjct 6 TVSVEHFSCPVCC---------KIYKDPVVLSCSHSFCQECLQKFWITCNT--------L 48 Query 84 ACPVCQRSLTRGN 96 CPVC+R +R + Sbjct 49 ECPVCRRRSSRDD 61 > dre:100330078 ret finger protein-like; K12012 tripartite motif-containing protein 35 Length=459 Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust. Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 20/70 (28%) Query 29 TMEQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKGAC 85 + ++ C VCC ++F + V C H +C+ CLQQ + TT C Sbjct 7 SADELSCPVCC---------EIFKNPVLLSCSHSVCKECLQQFWRTKTT--------QEC 49 Query 86 PVCQRSLTRG 95 PVC+R ++ Sbjct 50 PVCRRRSSKS 59 > dre:100002502 tripartite motif protein 21-like Length=459 Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 13/58 (22%) Query 42 CCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLTRGN 96 C C D +F + V C H C+ CLQQ + T CPVC+R ++G+ Sbjct 11 CPVCQD--IFKTPVILSCSHSFCQECLQQFWRSKNT--------QECPVCRRRSSKGH 58 > dre:558883 tprb, si:dkey-97o5.5, tpr, wu:fi76g05; translocated promoter region b (to activated MET oncogene); K09291 nucleoprotein TPR Length=2352 Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 0/63 (0%) Query 135 NDYLEEKEEAIYELVYGTDEQLKRRLENRLRELEGHGRAQPQHVQQKQQQQQQQNSEARA 194 N+ L++++E + V Q + RL + REL Q +H +Q+ + Q+Q +S+ + Sbjct 1582 NEELKQQKEELEVRVSALKSQYEGRLSRQERELRDLREQQERHGEQRDEPQEQGSSKTQE 1641 Query 195 ALR 197 R Sbjct 1642 PQR 1644 > dre:562814 si:ch211-284p22.1 Length=458 Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 20/65 (30%) Query 29 TMEQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKGAC 85 + ++ C VCC ++F + V C H +C+ CLQQ + TT C Sbjct 7 SADELSCPVCC---------EIFKNPVLLSCSHSVCKECLQQFWRTKTT--------LEC 49 Query 86 PVCQR 90 PVC+R Sbjct 50 PVCRR 54 > dre:555877 btr31; bloodthirsty-related gene family, member 31 Length=341 Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust. Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 42/135 (31%) Query 26 GSCTM-EQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNA 81 SC + E+ +CS+C +F+ V C H C CL Q + TN Sbjct 3 SSCGLNEELQCSICL---------DVFTDPVTTPCGHNFCRTCLDQYW---------TNT 44 Query 82 KG-ACPVCQRSLTRGNYVLIEPDIDLFSFEKQIRKRVNNALNALRDNF--ENTPAYNDYL 138 CP+C+ F KQ +VN AL + ++ E+ PA ++ + Sbjct 45 HTCCCPICKE-----------------KFSKQPDLKVNIALREVVEHLKQESRPAESETM 87 Query 139 EEKEEAIYELVYGTD 153 E++ + I E+ + D Sbjct 88 EDRLKKIQEINHSED 102 > dre:557841 zgc:172266 Length=447 Score = 29.3 bits (64), Expect = 8.8, Method: Compositional matrix adjust. Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 20/73 (27%) Query 27 SCTMEQYECSVCCTNCCYCADKKLFSSDV---CPHRLCENCLQQQFGGGTTGVISTNAKG 83 S ++++ C +CC ++F S + C H C+ C+QQ + T Sbjct 3 SLSVKEISCPICC---------EIFKSPILLSCSHSFCKECIQQFW--------RTKISR 45 Query 84 ACPVCQRSLTRGN 96 CPVC+R ++ + Sbjct 46 ECPVCRRRSSKDD 58 > hsa:79784 MYH14, DFNA4, DKFZp667A1311, FLJ13881, FLJ43092, KIAA2034, MHC16, MYH17, NMHC-II-C, myosin; myosin, heavy chain 14, non-muscle (EC:3.6.4.1); K10352 myosin heavy chain Length=2003 Score = 29.3 bits (64), Expect = 8.8, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 6/99 (6%) Query 99 LIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPA-YNDYLEEKEEAIYELVYGTDEQLK 157 L+E + FS + + +LN LR +E T A D L ++E+ EL E+LK Sbjct 1028 LLEDRLAEFSSQAAEEEEKVKSLNKLRLKYEATIADMEDRLRKEEKGRQEL-----EKLK 1082 Query 158 RRLENRLRELEGHGRAQPQHVQQKQQQQQQQNSEARAAL 196 RRL+ EL+ Q Q ++ + Q ++ E +AAL Sbjct 1083 RRLDGESSELQEQMVEQQQRAEELRAQLGRKEEELQAAL 1121 > ath:AT1G57820 VIM1; VIM1 (VARIANT IN METHYLATION 1); DNA binding / chromatin binding / double-stranded methylated DNA binding / histone binding / methyl-CpG binding / methyl-CpNpG binding / methyl-CpNpN binding / ubiquitin-protein ligase Length=645 Score = 29.3 bits (64), Expect = 9.5, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 13/110 (11%) Query 56 CPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLTRGNYVLIEP----DIDLFSFEK 111 C H C+ CL+ +F G T ++ + G R+L VL P DI F Sbjct 533 CAHNFCKACLEAKFAGKT--LVRERSTGG-----RTLRSRKNVLNCPCCPTDISDFLQNP 585 Query 112 QIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIYELVYGTDEQLKRRLE 161 Q+ + V + L+ E+T D E++ E EQ K+R++ Sbjct 586 QVNREVAEVIEKLKTQEEDTAELED--EDEGECSGTTPEEDSEQPKKRIK 633 > dre:414846 rnf141, zgc:86917; ring finger protein 141 Length=222 Score = 29.3 bits (64), Expect = 9.8, Method: Compositional matrix adjust. Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 10/62 (16%) Query 42 CCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQRSLTRGNYVLIE 101 CC C D K C H C+ C+ + G CPVC+ +T N + Sbjct 147 CCICMDGKADLILPCAHSFCQKCIDKWSGQSRN----------CPVCRIQVTAANESWVM 196 Query 102 PD 103 D Sbjct 197 SD 198 Lambda K H 0.322 0.135 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5931269072 Database: egene_temp_file_orthology_annotation_similarity_blast_database_966 Posted date: Sep 16, 2011 8:45 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40