bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_3233_orf1
Length=89
Score E
Sequences producing significant alignments: (Bits) Value
CE16654 61.2 4e-10
Hs20540987 60.5 8e-10
At2g32170 54.3 5e-08
At2g32160 48.5 3e-06
7290235 44.7 4e-05
SPBC1778.07 43.9 7e-05
YNL092w 38.1 0.004
YMR209c 29.6 1.4
Hs4758750_2 29.3 1.7
At1g24180 28.9 2.2
Hs17460223 27.7 4.9
> CE16654
Length=369
Score = 61.2 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query 4 PGGLWANVGPLLYHYAETPHEMSVEFSAEEILAVVR-NWFNLLKVEWRDCYYTSNRKSMM 62
PGG+W NVGPL +H+++TP E S+E I+ ++R F +++ D YT NR++M
Sbjct 291 PGGVWINVGPLTWHFSDTPDEASIELPYSVIMEMIRKKGFQVVEERVIDSKYTVNRRAMQ 350
Query 63 QVQYHCLHFVGIRNEE 78
Q+ C +F + E+
Sbjct 351 FNQFACAYFYARKPEK 366
> Hs20540987
Length=475
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query 3 RPGGLWANVGPLLYHYAETPHEMSVEFSAEEILAVVRNWFNLLKVEWRDCY--YTSNRKS 60
+PGG+W N+GPLLYH+ +E+S+E S E+I VV + ++VE YT N S
Sbjct 399 KPGGIWINLGPLLYHFENLANELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYTVNDLS 458
Query 61 MMQVQYHCLHFV 72
MM+ Y C+ FV
Sbjct 459 MMKYYYECVLFV 470
> At2g32170
Length=306
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 46/69 (66%), Gaps = 4/69 (5%)
Query 3 RPGGLWANVGPLLYHYAET---PHEMSVEFSAEEILAVVRNW-FNLLKVEWRDCYYTSNR 58
+ GG+W N+GPLLYH+A+T +EMS+E S E++ V ++ F + K + YT+N
Sbjct 223 KDGGVWINLGPLLYHFADTYGHENEMSIELSLEDVKRVASHFGFVIEKERTIETTYTTNP 282
Query 59 KSMMQVQYH 67
++MMQ +Y+
Sbjct 283 RAMMQNRYY 291
> At2g32160
Length=424
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query 3 RPGGLWANVGPLLYHYAETP---HEMSVEFSAEEILAVVRNW-FNLLKVEWRDCYYTSNR 58
+ GG+ N+GPLLYH+A+ +EMS+E S E++ V ++ F + K + + Y++N
Sbjct 341 KDGGVLINLGPLLYHFADEQGLENEMSIELSLEDVKRVASHYGFEMEKEKTIETTYSTNP 400
Query 59 KSMMQVQYH 67
+SMM+ +Y+
Sbjct 401 RSMMKNRYY 409
> 7290235
Length=456
Score = 44.7 bits (104), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query 4 PGGLWANVGPLLYHYAETPHEMSVEFSAEEILAVVRNWFNLLKVEWRD--CYYTSNRKSM 61
PGG+W N+GPLLYH+++ + S+E + E++ ++ + +++ Y N SM
Sbjct 321 PGGIWVNLGPLLYHFSDVSGQNSIEPAFEDLCIIMESVGFVIEKSRTGIRTKYAQNPSSM 380
Query 62 MQVQYHCLHFV 72
Q +Y L +V
Sbjct 381 KQSEYQSLFWV 391
> SPBC1778.07
Length=373
Score = 43.9 bits (102), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query 5 GGLWANVGPLLYHY---------AETPHEMSVEFSAEEILAVVRNW-FNLLKVEWRDCYY 54
GG W N+GPLLYH+ +++ + VE + E++ V+ + F +LK D Y
Sbjct 285 GGYWINLGPLLYHFESEGTSNSNSDSQQQPFVELTLEQLFYVMDSMGFEVLKHNSVDTTY 344
Query 55 TSNRKSMMQVQYHCLHFV 72
+++SM++ YH ++V
Sbjct 345 MGDKRSMLEWIYHPHYWV 362
> YNL092w
Length=400
Score = 38.1 bits (87), Expect = 0.004, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 24/70 (34%)
Query 3 RPGGLWANVGPLLYHY-----AETPHE-----------------MSVEFSAEEILAVVRN 40
+PGG+W N GPLLYH+ ET +E M +E S+++I+++ N
Sbjct 295 KPGGIWCNFGPLLYHFENDHGVETTYEVNPYSGFQDKINDYTPLMGLELSSDDIISIATN 354
Query 41 W--FNLLKVE 48
F L++ E
Sbjct 355 HLDFELIRRE 364
> YMR209c
Length=457
Score = 29.6 bits (65), Expect = 1.4, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query 8 WANVGPLLYHYAETPHEMSVEFSAEEI--LAVVRNWFNLLKVEWRDCY-----YTSNRKS 60
W NVGPL Y P V+F+ +E+ L +R W +L++ D Y ++ +S
Sbjct 386 WVNVGPL--KYGTKP---LVQFTGDELSRLRKIRGWKDLVEEYEVDSSKGLNGYLTDYES 440
Query 61 MMQVQYHCLHF 71
M Q Y L F
Sbjct 441 MYQGYYGLLKF 451
> Hs4758750_2
Length=878
Score = 29.3 bits (64), Expect = 1.7, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query 23 HEMSVEFSAEEILAVVRNWFNLLKVEWRDCYYTSNRKSMMQVQYHCLHFVGIRNEEPSPE 82
+++S+ S E+ L+ + W + C T ++K + ++Q HC + G R EP E
Sbjct 494 YQVSIPQSCEQCLSYI--WLMDKALLCSVCKMTCHKKCVHKIQSHCSYTYG-RKGEPGAE 550
Query 83 LAH-GTC 88
H G C
Sbjct 551 PGHFGVC 557
> At1g24180
Length=393
Score = 28.9 bits (63), Expect = 2.2, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query 13 PLLYHYAETPHEMSVEFSAEEILAVVRNWFNLLKVE 48
P H E+P SVE S+EEILA R+ + ++E
Sbjct 43 PFTSHLCESPSR-SVETSSEEILAFFRDMARMRRME 77
> Hs17460223
Length=598
Score = 27.7 bits (60), Expect = 4.9, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 0/26 (0%)
Query 4 PGGLWANVGPLLYHYAETPHEMSVEF 29
PG + + +GP L H TP E S+EF
Sbjct 566 PGEIPSFIGPNLSHVMMTPTEFSIEF 591
Lambda K H
0.322 0.137 0.465
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1181033294
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40