bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_3134_orf2
Length=144
Score E
Sequences producing significant alignments: (Bits) Value
7296186 62.0 4e-10
Hs6912654 55.5 4e-08
At5g64270 53.1 2e-07
SPAC27F1.09c 42.0 4e-04
CE03641 31.2 0.66
CE18542 28.9 3.5
At4g14330 28.1 5.4
> 7296186
Length=1349
Score = 62.0 bits (149), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query 36 SSGGDAGDAAALLERRAIAAREDMYRRQRFQRALSPERQDPFAADGGRRADVSARSYADV 95
+ G + D A R IA RED YR++R +SPER DPF ADGG+ DV +R+Y D+
Sbjct 112 TQGKEDVDPMADRRRPTIADREDEYRQKRRHIIISPERADPF-ADGGKTPDVGSRTYTDI 170
Query 96 MVEQQLDREKQAAVKQIRKLQEDAAIAQQL 125
M EQ L E+ ++I + ++ + + +
Sbjct 171 MREQMLKGEESELRRRILEKTKEGTLVKTV 200
> Hs6912654
Length=1304
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query 53 IAAREDMYRRQRFQRALSPERQDPFAADGGRRAD--VSARSYADVMVEQQLDREKQAAVK 110
IA RED Y++ R +SPER DPF ADGG+ D ++ R+Y DVM EQ L +E++ +
Sbjct 112 IADREDEYKKHRRTMIISPERLDPF-ADGGKTPDPKMNVRTYMDVMREQHLTKEEREIRQ 170
Query 111 QI 112
Q+
Sbjct 171 QL 172
> At5g64270
Length=1269
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query 50 RRAIAAREDMYRRQRFQRALSPERQDPFAADGGRRADVSARSYADVMVEQQLDREKQAAV 109
R++IA RE YR +R R LSP+R D FA G + D S R+Y D M E L REK+ +
Sbjct 96 RQSIAEREGEYRNRRLNRVLSPDRVDAFAM-GDKTPDASVRTYTDHMRETALQREKEETM 154
Query 110 KQI 112
+ I
Sbjct 155 RLI 157
> SPAC27F1.09c
Length=1188
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query 50 RRAIAAREDMYRRQRFQRALSPERQDPFAADGGRRADVSARSYADVMVEQQLDREK 105
++ I RE Y++QR+ R L+P R D F DG + + RSYA+VM + +L++E+
Sbjct 119 KKQIQDRESDYQKQRYDRQLTPTRVDAFQPDGTQS---NGRSYAEVMRQVELEKEE 171
> CE03641
Length=1322
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query 51 RAIAAREDMYRRQRFQRALSPERQDPFAADGGRRADVSARSYADVMVEQQLDREK 105
+ IA R+ Y + +R +SP+R D F + D R YA+VM +Q EK
Sbjct 115 KTIAERQSKYHERAMRRQISPDRADAFV---DQTPDNRNRGYAEVMRDQMYHEEK 166
> CE18542
Length=2962
Score = 28.9 bits (63), Expect = 3.5, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 14/105 (13%)
Query 28 SERRAMLASSGGDAGDAAALLERRAIAAREDMYRRQRFQRALSPERQDPFAADGGR---- 83
+E+R M+AS+ LE+R + D QR +R ++ F + R
Sbjct 1087 AEQRRMMAST--------RRLEKRTTQKQVDPETIQRLRREDEVRKRKRFEEEDRRGMIR 1138
Query 84 --RADVSARSYADVMVEQQLDREKQAAVKQIRKLQEDAAIAQQLL 126
V+ + D M+E+ L EK ++IR+ QE+ I + +
Sbjct 1139 RREERVALQEKVDRMLEEGLRLEKVREAERIRQQQEEERIEMETI 1183
> At4g14330
Length=959
Score = 28.1 bits (61), Expect = 5.4, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 0/33 (0%)
Query 98 EQQLDREKQAAVKQIRKLQEDAAIAQQLLQQRQ 130
++Q ++E+ A KQ++K +E+ A + LL QR+
Sbjct 408 KKQKEKERNEAQKQLKKKEEEVAALRSLLTQRE 440
Lambda K H
0.314 0.128 0.343
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1675978996
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40