bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eace_3134_orf2 Length=144 Score E Sequences producing significant alignments: (Bits) Value 7296186 62.0 4e-10 Hs6912654 55.5 4e-08 At5g64270 53.1 2e-07 SPAC27F1.09c 42.0 4e-04 CE03641 31.2 0.66 CE18542 28.9 3.5 At4g14330 28.1 5.4 > 7296186 Length=1349 Score = 62.0 bits (149), Expect = 4e-10, Method: Composition-based stats. Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 1/90 (1%) Query 36 SSGGDAGDAAALLERRAIAAREDMYRRQRFQRALSPERQDPFAADGGRRADVSARSYADV 95 + G + D A R IA RED YR++R +SPER DPF ADGG+ DV +R+Y D+ Sbjct 112 TQGKEDVDPMADRRRPTIADREDEYRQKRRHIIISPERADPF-ADGGKTPDVGSRTYTDI 170 Query 96 MVEQQLDREKQAAVKQIRKLQEDAAIAQQL 125 M EQ L E+ ++I + ++ + + + Sbjct 171 MREQMLKGEESELRRRILEKTKEGTLVKTV 200 > Hs6912654 Length=1304 Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 3/62 (4%) Query 53 IAAREDMYRRQRFQRALSPERQDPFAADGGRRAD--VSARSYADVMVEQQLDREKQAAVK 110 IA RED Y++ R +SPER DPF ADGG+ D ++ R+Y DVM EQ L +E++ + Sbjct 112 IADREDEYKKHRRTMIISPERLDPF-ADGGKTPDPKMNVRTYMDVMREQHLTKEEREIRQ 170 Query 111 QI 112 Q+ Sbjct 171 QL 172 > At5g64270 Length=1269 Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query 50 RRAIAAREDMYRRQRFQRALSPERQDPFAADGGRRADVSARSYADVMVEQQLDREKQAAV 109 R++IA RE YR +R R LSP+R D FA G + D S R+Y D M E L REK+ + Sbjct 96 RQSIAEREGEYRNRRLNRVLSPDRVDAFAM-GDKTPDASVRTYTDHMRETALQREKEETM 154 Query 110 KQI 112 + I Sbjct 155 RLI 157 > SPAC27F1.09c Length=1188 Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 3/56 (5%) Query 50 RRAIAAREDMYRRQRFQRALSPERQDPFAADGGRRADVSARSYADVMVEQQLDREK 105 ++ I RE Y++QR+ R L+P R D F DG + + RSYA+VM + +L++E+ Sbjct 119 KKQIQDRESDYQKQRYDRQLTPTRVDAFQPDGTQS---NGRSYAEVMRQVELEKEE 171 > CE03641 Length=1322 Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Query 51 RAIAAREDMYRRQRFQRALSPERQDPFAADGGRRADVSARSYADVMVEQQLDREK 105 + IA R+ Y + +R +SP+R D F + D R YA+VM +Q EK Sbjct 115 KTIAERQSKYHERAMRRQISPDRADAFV---DQTPDNRNRGYAEVMRDQMYHEEK 166 > CE18542 Length=2962 Score = 28.9 bits (63), Expect = 3.5, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 14/105 (13%) Query 28 SERRAMLASSGGDAGDAAALLERRAIAAREDMYRRQRFQRALSPERQDPFAADGGR---- 83 +E+R M+AS+ LE+R + D QR +R ++ F + R Sbjct 1087 AEQRRMMAST--------RRLEKRTTQKQVDPETIQRLRREDEVRKRKRFEEEDRRGMIR 1138 Query 84 --RADVSARSYADVMVEQQLDREKQAAVKQIRKLQEDAAIAQQLL 126 V+ + D M+E+ L EK ++IR+ QE+ I + + Sbjct 1139 RREERVALQEKVDRMLEEGLRLEKVREAERIRQQQEEERIEMETI 1183 > At4g14330 Length=959 Score = 28.1 bits (61), Expect = 5.4, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 0/33 (0%) Query 98 EQQLDREKQAAVKQIRKLQEDAAIAQQLLQQRQ 130 ++Q ++E+ A KQ++K +E+ A + LL QR+ Sbjct 408 KKQKEKERNEAQKQLKKKEEEVAALRSLLTQRE 440 Lambda K H 0.314 0.128 0.343 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1675978996 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40