bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_3099_orf1
Length=68
Score E
Sequences producing significant alignments: (Bits) Value
CE28286 61.6 4e-10
SPCC830.11c 51.6 4e-07
Hs7706212 50.1 1e-06
7303434 47.0 8e-06
YDL166c 43.5 9e-05
YGR125w 28.5 2.9
At5g28740 27.3 6.7
CE28224 26.9 9.4
> CE28286
Length=182
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 0/60 (0%)
Query 1 LFDRLTARQYPQKKIDENMQAEIFQVLLDEARETFGEDKIKELQNNTIQQLNDNVTAAAE 60
L+DRL +R Y + KI EN++ EIF LL+EARE++ ED + ELQ+ T +Q+ +N+ E
Sbjct 110 LYDRLQSRGYSEFKIKENVECEIFGTLLEEARESYSEDIVHELQSETTEQMEENLERICE 169
> SPCC830.11c
Length=175
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 0/64 (0%)
Query 1 LFDRLTARQYPQKKIDENMQAEIFQVLLDEARETFGEDKIKELQNNTIQQLNDNVTAAAE 60
L++RL +R Y +KI EN +AEI Q+ L+EARE+F + EL + +I+++ N++ +
Sbjct 107 LWERLESRGYSLEKIQENNEAEIMQICLEEARESFDPKIVVELPSESIEEMESNLSRITQ 166
Query 61 AYNN 64
N
Sbjct 167 WVTN 170
> Hs7706212
Length=172
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 39/55 (70%), Gaps = 0/55 (0%)
Query 1 LFDRLTARQYPQKKIDENMQAEIFQVLLDEARETFGEDKIKELQNNTIQQLNDNV 55
L++RL R Y +KK+ +N+Q EIFQVL +EA ++ E+ + +L +N ++L +NV
Sbjct 102 LYERLETRGYNEKKLTDNIQCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNV 156
> 7303434
Length=175
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 0/47 (0%)
Query 1 LFDRLTARQYPQKKIDENMQAEIFQVLLDEARETFGEDKIKELQNNT 47
L+DRL R Y +KK+ N+Q EIF +L+EAR+++ D + EL+ T
Sbjct 108 LYDRLKERNYNEKKLASNIQCEIFGTILEEARDSYKSDIVFELKGET 154
> YDL166c
Length=197
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 0/56 (0%)
Query 1 LFDRLTARQYPQKKIDENMQAEIFQVLLDEARETFGEDKIKELQNNTIQQLNDNVT 56
L+ RL AR Y KI+EN+ AEI V+ +A E++ + ELQ++T + + NV+
Sbjct 107 LYSRLHARGYHDSKIEENLDAEIMGVVKQDAVESYEPHIVVELQSDTKEDMVSNVS 162
> YGR125w
Length=1036
Score = 28.5 bits (62), Expect = 2.9, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 0/42 (0%)
Query 12 QKKIDENMQAEIFQVLLDEARETFGEDKIKELQNNTIQQLND 53
++ IDE E ++LL A +D+ + LQN+++ +L D
Sbjct 132 EENIDEEYSDEYSRLLLSPASSNVDDDRNRGLQNSSLPELED 173
> At5g28740
Length=917
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 10/37 (27%), Positives = 21/37 (56%), Gaps = 0/37 (0%)
Query 13 KKIDENMQAEIFQVLLDEARETFGEDKIKELQNNTIQ 49
KK+ E + E++++ + A E FG + +E+ I+
Sbjct 652 KKVPEGQKLEMYEIYISRAAEIFGVPRTREIYEQAIE 688
> CE28224
Length=1088
Score = 26.9 bits (58), Expect = 9.4, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 0/35 (0%)
Query 16 DENMQAEIFQVLLDEARETFGEDKIKELQNNTIQQ 50
+ +E+ Q+ ++ ETF ED + EL NN Q+
Sbjct 248 ESQTMSEVDQLPSEQVAETFSEDNVNELDNNANQK 282
Lambda K H
0.315 0.130 0.344
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1203543208
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40