bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_3068_orf2
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
At4g05020 65.9 2e-11
At4g28220 64.7 5e-11
At2g20800 63.2 2e-10
At4g21490 58.2 5e-09
YML120c 55.1 4e-08
YMR145c 54.7 5e-08
SPBC947.15c 52.4 3e-07
SPAC3A11.07 51.6 5e-07
At1g07180 50.4 9e-07
At2g29990 49.7 2e-06
YDL085w 46.2 2e-05
Hs22044901 31.2 0.61
At1g51300 27.7 7.4
At2g01320 27.3 8.8
> At4g05020
Length=583
Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query 24 KRLRVVVVGGGWSSSSFVSSLDPRQFEVVWISPEEHLSYTPLLPCVCGGALPAAACTTSL 83
K+ +VV++G GW+ +SF+ +L+ Q+EV ISP + ++TPLLP V G + A + +
Sbjct 57 KKKKVVLLGTGWAGTSFLKNLNNSQYEVQIISPRNYFAFTPLLPSVTCGTVEARSVVEPI 116
Query 84 RGLLSFGGKAEGRGRYYQAVVDNVDLNNNRVVCRPVLSLAETSSSGERGSWEEAYDY 140
R + G K Y +A +D + +V CR L SS+G++ + YDY
Sbjct 117 RNI---GRKKNVDTSYLEAECFKIDPASKKVYCRSKQGL---SSNGKK-EFSVDYDY 166
> At4g28220
Length=559
Score = 64.7 bits (156), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query 28 VVVVGGGWSSSSFVSSLDPRQFEVVWISPEEHLSYTPLLPCVCGGALPAAACTTSLRGLL 87
VVV+G GW+ SF+ LD ++V +SP+ + ++TPLLP V G + A + S+R +
Sbjct 52 VVVLGTGWAGISFLKDLDITSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIVESVRNIT 111
Query 88 SFGGKAEGRGRYYQAVVDNVDLNNNRVVCRPVLSLAETSSSGERGSWEEAYDY 140
K G ++A +D N +V CRPV +S + YDY
Sbjct 112 K---KKNGEIELWEADCFKIDHVNQKVHCRPVFKDDPEASQ----EFSLGYDY 157
> At2g20800
Length=582
Score = 63.2 bits (152), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query 24 KRLRVVVVGGGWSSSSFVSSLDPRQFEVVWISPEEHLSYTPLLPCVCGGALPAAACTTSL 83
++ +VVV+G GWS SF+S L+ ++V +SP +TPLLP V G + A + +
Sbjct 62 RKKKVVVLGSGWSGYSFLSYLNNPNYDVQVVSPRNFFLFTPLLPSVTNGTVEARSIVEPI 121
Query 84 RGLLSFGGKAEGRGRYYQAVVDNVDLNNNRVVCRPVLSLAETSSSGERGSWEEAYDY 140
RGL+ G Y +A +D +N ++ CR S +G+ E DY
Sbjct 122 RGLMRKKGF-----EYKEAECVKIDASNKKIHCR------SKEGSSLKGTTEFDMDY 167
> At4g21490
Length=478
Score = 58.2 bits (139), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query 21 QNKKRLRVVVVGGGWSSSSFVSSLDPRQFEVVWISPEEHLSYTPLLPCVCGGALPAAACT 80
+ +KR +VV++G GW+ +SF+ +L+ +EV ISP + ++TPLLP V G + A +
Sbjct 40 KTRKR-KVVLLGTGWAGASFLKTLNNSSYEVQVISPRNYFAFTPLLPSVTCGTVEARSVV 98
Query 81 TSLRGLLSFGGKAEGRGRYYQAVVDNVDLNNNRVVCRPVLSLAETSSSGERGSWEEAYDY 140
+R + K + +A +D + +V CR S +S G++ ++ YDY
Sbjct 99 EPIRNI---ARKQNVEMSFLEAECFKIDPGSKKVYCR---SKQGVNSKGKK-EFDVDYDY 151
> YML120c
Length=513
Score = 55.1 bits (131), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query 21 QNKKRLRVVVVGGGWSSSSFVSSLDPRQFEVVWISPEEHLSYTPLLPCVCGGALPAAACT 80
Q+ + V+++G GW + SF+ +D +++ V ISP + +TPLLP G + +
Sbjct 49 QHSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSI- 107
Query 81 TSLRGLLSFGGKAEGRGRYYQAVVDNVDLNNNRVVCRPVLSLAE 124
+ +++F K +G YY+A +++ + N V + + ++++
Sbjct 108 --IEPIVNFALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQ 149
> YMR145c
Length=560
Score = 54.7 bits (130), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query 24 KRLRVVVVGGGWSSSSFVSSLDPRQFEVVWISPEEHLSYTPLLPCVCGGALPAAACTTSL 83
KR +V++G GW S S + +LD + VV +SP + +TPLLP G + + +
Sbjct 111 KRKTLVILGSGWGSVSLLKNLDTTLYNVVVVSPRNYFLFTPLLPSTPVGTIELKSIVEPV 170
Query 84 RGLLSFGGKAEGRGRYYQAVVDNVDLNNNRV 114
R + ++ G YY+A +VD N +
Sbjct 171 R---TIARRSHGEVHYYEAEAYDVDPENKTI 198
> SPBC947.15c
Length=551
Score = 52.4 bits (124), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query 28 VVVVGGGWSSSSFVSSLDPRQFEVVWISPEEHLSYTPLLPCVCGGALPAAACTTSLRGLL 87
+VV+G GW + + + +LDP + + +SP +H +TP+LP G L + T + L
Sbjct 93 IVVLGSGWGAVAAIKNLDPSLYNITLVSPRDHFLFTPMLPSCTVGTLRLPSITEPIVAL- 151
Query 88 SFGGKAEGRGRYYQAVVDNVDLNNNRVVCR 117
F GK + +QA +D + +V R
Sbjct 152 -FKGKID-PSNIHQAECTAIDTSAKKVTIR 179
> SPAC3A11.07
Length=551
Score = 51.6 bits (122), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query 20 LQNKKRLRVVVVGGGWSSSSFVSSLDPRQFEVVWISPEEHLSYTPLLPCVCGGALPAAAC 79
L + + +VV+G GW ++S + ++D F V+ +SP + +T LLP G++ +
Sbjct 86 LPDPSKKTLVVLGAGWGATSILRTIDTSLFNVIVVSPRNYFLFTSLLPSTATGSVHTRSI 145
Query 80 TTSLRGLLSFGGKAEGRGRYYQAVVDNVDLNNNRVVCRPVLSLAETSSSGERGSWEEAYD 139
+R +L ++Y+A +VD + + V+ + +T++ G E YD
Sbjct 146 VQPIRYMLR---HKSCYVKFYEAECTDVDAD------KKVIHIKKTTTDGVDLEQEIKYD 196
Query 140 Y 140
Y
Sbjct 197 Y 197
> At1g07180
Length=510
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query 27 RVVVVGGGWSSSSFVSSLDPRQFEVVWISPEEHLSYTPLLPCVCGGALPAAACTTSLRGL 86
RV+V+G GW+ + +D ++VV +SP H+ +TPLL C G L + + +
Sbjct 75 RVLVLGSGWAGCRVLKGIDTSIYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPISRI 134
Query 87 LSFGGKAEGRGRYYQAVVDNVDLNNNRVVCRPVLSLAETSSSGERGSWEEAYD 139
+ G Y+ A +D +N+ V C V E SS+ + ++ AYD
Sbjct 135 QPAISREPG-SYYFLANCSKLDADNHEVHCETV---TEGSSTLKPWKFKIAYD 183
> At2g29990
Length=508
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 0/51 (0%)
Query 24 KRLRVVVVGGGWSSSSFVSSLDPRQFEVVWISPEEHLSYTPLLPCVCGGAL 74
++ RVVV+G GW+ + +D ++VV +SP H+ +TPLL C G L
Sbjct 70 EKPRVVVLGSGWAGCRLMKGIDTNLYDVVCVSPRNHMVFTPLLASTCVGTL 120
> YDL085w
Length=545
Score = 46.2 bits (108), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query 24 KRLRVVVVGGGWSSSSFVSSLDPRQFEVVWISPEEHLSYTPLLPCVCGGALPAAACTTSL 83
K+ +V++G GW + S + LD + V +SP +TPLLP G + + +
Sbjct 96 KKKELVILGTGWGAISLLKKLDTSLYNVTVVSPRSFFLFTPLLPSTPVGTIEMKSIVEPV 155
Query 84 RGLLSFGGKAEGRGRYYQAVVDNVDLNNNRVVCRPV 119
R S + G Y +A +VD +V+ + V
Sbjct 156 R---SIARRTPGEVHYIEAEALDVDPKAKKVMVQSV 188
> Hs22044901
Length=418
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Query 1 CCSRWVQCLSLCTIHKCSNLQNKKRLRVVVVGGGWSSSSFVSSLDPRQFEVVWISPEEHL 60
C S W++ + IHK +N + G G +S DPR+ P +
Sbjct 302 CTSEWLEANGVWIIHKLNNEPFNNQELTAAFGNGIQASGSTEPRDPREHPSSPYHP-HYS 360
Query 61 SYTPLLPCVCGGALPAAACTTSLRGLLSFGGK 92
+++P LP A P+ R GGK
Sbjct 361 AHSPALPWSQQSAAPSMQARAGGRN----GGK 388
> At1g51300
Length=212
Score = 27.7 bits (60), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Query 34 GWSSSSFVSSLDPRQFEVVWISPEEHLSYTPLLPCVCGGALPAAACTTSL 83
G+ SS V S + V WI P +PL+ V G PA AC SL
Sbjct 50 GYDSSELVKSFS--LYNVKWICPS-----SPLISNVGFGGAPARACKISL 92
> At2g01320
Length=725
Score = 27.3 bits (59), Expect = 8.8, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 0/58 (0%)
Query 83 LRGLLSFGGKAEGRGRYYQAVVDNVDLNNNRVVCRPVLSLAETSSSGERGSWEEAYDY 140
L GLL GK Y A V DL +++ R LS A E S EE +Y
Sbjct 133 LSGLLEVNGKPSSSKAYKLAFVRQEDLFFSQLTVRETLSFAAELQLPEISSAEERDEY 190
Lambda K H
0.320 0.134 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1571531578
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40