bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_2993_orf5
Length=60
Score E
Sequences producing significant alignments: (Bits) Value
SPCC1020.06c 90.9 5e-19
YLR354c 82.8 1e-16
Hs5803187 82.0 2e-16
7291684 80.5 7e-16
YGR043c 80.1 1e-15
CE28974 75.9 2e-14
At1g12230 46.2 1e-05
At5g13420 29.6 1.4
7300898 29.3 1.7
CE26739 28.1 3.6
> SPCC1020.06c
Length=322
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 51/58 (87%), Gaps = 0/58 (0%)
Query 3 RERILIKIAATWEGIQAAKQLKEENINCNITLLFSLCQAIAASDAGAYLVSPFVGRIL 60
RER+LIKIA+T+EGIQAAKQL+EE I+CN+TLLFS QA+A ++A L+SPFVGRIL
Sbjct 126 RERVLIKIASTYEGIQAAKQLEEEGIHCNLTLLFSFVQAVACAEANVTLISPFVGRIL 183
> YLR354c
Length=335
Score = 82.8 bits (203), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/60 (65%), Positives = 53/60 (88%), Gaps = 1/60 (1%)
Query 2 TRERILIKIAATWEGIQAAKQLKEEN-INCNITLLFSLCQAIAASDAGAYLVSPFVGRIL 60
++ER+LIKIA+TWEGIQAAK+L+E++ I+CN+TLLFS QA+A ++A L+SPFVGRIL
Sbjct 137 SKERVLIKIASTWEGIQAAKELEEKDGIHCNLTLLFSFVQAVACAEAQVTLISPFVGRIL 196
> Hs5803187
Length=337
Score = 82.0 bits (201), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 53/60 (88%), Gaps = 1/60 (1%)
Query 2 TRERILIKIAATWEGIQAAKQLKEEN-INCNITLLFSLCQAIAASDAGAYLVSPFVGRIL 60
+++RILIK+++TWEGIQA K+L+E++ I+CN+TLLFS QA+A ++AG L+SPFVGRIL
Sbjct 135 SKDRILIKLSSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTLISPFVGRIL 194
> 7291684
Length=320
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
Query 3 RERILIKIAATWEGIQAAKQLKEEN-INCNITLLFSLCQAIAASDAGAYLVSPFVGRIL 60
+ERILIK+A+TWEGI+AA+ L+ E+ ++CN+TLLFS QA+A ++AG L+SPFVGRIL
Sbjct 125 KERILIKLASTWEGIKAAEILENEHGVHCNLTLLFSFAQAVACAEAGVTLISPFVGRIL 183
> YGR043c
Length=333
Score = 80.1 bits (196), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Query 3 RERILIKIAATWEGIQAAKQLK-EENINCNITLLFSLCQAIAASDAGAYLVSPFVGRIL 60
+ER+LIKIA+TWEGIQAA++L+ + I+CN+TLLFS QA+A ++A L+SPFVGRI+
Sbjct 138 KERVLIKIASTWEGIQAARELEVKHGIHCNMTLLFSFTQAVACAEANVTLISPFVGRIM 196
> CE28974
Length=319
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query 2 TRERILIKIAATWEGIQAAKQLKEEN-INCNITLLFSLCQAIAASDAGAYLVSPFVGRIL 60
+++RILIK+A+TWEGI+AAK L+ ++ I+CN+TLLF+ QA+A +++G L+SPFVGRI+
Sbjct 124 SKDRILIKLASTWEGIRAAKFLESKHGIHCNMTLLFNFEQAVACAESGVTLISPFVGRIM 183
> At1g12230
Length=377
Score = 46.2 bits (108), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 0/56 (0%)
Query 4 ERILIKIAATWEGIQAAKQLKEENINCNITLLFSLCQAIAASDAGAYLVSPFVGRI 59
+R+L KI ATW+GI+AA+ L+ E I ++T ++S QA AAS AGA ++ FVGR+
Sbjct 168 DRLLFKIPATWQGIEAARLLESEGIQTHMTFVYSFAQAAAASQAGASVIQIFVGRL 223
> At5g13420
Length=438
Score = 29.6 bits (65), Expect = 1.4, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 0/45 (0%)
Query 3 RERILIKIAATWEGIQAAKQLKEENINCNITLLFSLCQAIAASDA 47
R + IKI AT I + + + I+ N+TL+FS+ + A DA
Sbjct 203 RRNVYIKIPATAPCIPSIRDVIAAGISVNVTLIFSIARYEAVIDA 247
> 7300898
Length=1638
Score = 29.3 bits (64), Expect = 1.7, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Query 7 LIKIAATWEGIQAAKQLKEENINCNI----TLLFSLCQ---AIAASDAGAYLVSPF 55
L+K+A TWE +++ + E N+ + LL ++CQ A+ +D G P
Sbjct 856 LMKVACTWEDVKSLRSDMERNLTSAVHFRTKLLSAVCQMQSALGITDLGQLYYKPL 911
> CE26739
Length=502
Score = 28.1 bits (61), Expect = 3.6, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 0/47 (0%)
Query 10 IAATWEGIQAAKQLKEENINCNITLLFSLCQAIAASDAGAYLVSPFV 56
+ A GI +A ++E NC +T++ SD A L+ PF+
Sbjct 7 LGAGINGIASALAIQERLPNCEVTIIAEKFSPNTTSDVAAGLIEPFL 53
Lambda K H
0.322 0.135 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1181901402
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40