bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_2749_orf3
Length=97
Score E
Sequences producing significant alignments: (Bits) Value
Hs17865802 70.1 1e-12
Hs7019569 66.6 1e-11
7293406 66.6 1e-11
SPAC2G11.06 60.1 1e-09
CE25235 58.2 4e-09
YPR173c 53.9 7e-08
At2g27600 45.8 2e-05
Hs4758312 29.3 1.8
YPL074w 28.9 2.3
Hs7657299 28.5 2.8
Hs21361278 28.5 3.0
HsM5032175 28.5 3.1
At2g21460 28.5 3.4
At2g34560 28.5 3.4
At3g27120 28.5 3.6
CE03750 28.1 4.1
> Hs17865802
Length=444
Score = 70.1 bits (170), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 10/78 (12%)
Query 15 FSGSDISVLVRDALFEPIRRCRTATAFKQVMVDGRA--------FYVPCRPDDSDPTTRR 66
+SG+DIS++VRDAL +P+R+ ++AT FK+V RA PC P DP
Sbjct 336 YSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNHLVDDLLTPCSP--GDPGAIE 393
Query 67 MTLMSVPSDRLLPPEVTM 84
MT M VP D+LL P V+M
Sbjct 394 MTWMDVPGDKLLEPVVSM 411
> Hs7019569
Length=437
Score = 66.6 bits (161), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query 15 FSGSDISVLVRDALFEPIRRCRTATAFKQVMVDGRA--------FYVPCRPDDSDPTTRR 66
+SG+DIS++VRD+L +P+R+ ++AT FK+V R PC P DP
Sbjct 329 YSGADISIIVRDSLMQPVRKVQSATHFKKVCGPSRTNPSMMIDDLLTPCSP--GDPGAME 386
Query 67 MTLMSVPSDRLLPPEVTM 84
MT M VP D+LL P V M
Sbjct 387 MTWMDVPGDKLLEPVVCM 404
> 7293406
Length=442
Score = 66.6 bits (161), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query 15 FSGSDISVLVRDALFEPIRRCRTATAFKQVMVDG--------RAFYVPCRPDDSDPTTRR 66
+SG+DIS++VRDAL EP+R+ +TAT FK+V VPC P D
Sbjct 334 YSGADISIVVRDALMEPVRKVQTATHFKRVSGPSPTNHEEIVNDLLVPCSPGDQGAV--E 391
Query 67 MTLMSVPSDRLLPPEVTM 84
M M VPSD+L P VTM
Sbjct 392 MNWMDVPSDKLFEPPVTM 409
> SPAC2G11.06
Length=432
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query 15 FSGSDISVLVRDALFEPIRRCRTATAFKQVMVD--GRAFYVPCRPDDSDPTTRRMTLMSV 72
+SGSDIS++VRDA+ EP+RR TAT FK+V + R PC P DP + + V
Sbjct 330 YSGSDISIVVRDAIMEPVRRIHTATHFKEVYDNKSNRTLVTPCSP--GDPDAFESSWLEV 387
Query 73 PSDRLLPPEVTM 84
+ ++ P++T+
Sbjct 388 NPEDIMEPKLTV 399
> CE25235
Length=365
Score = 58.2 bits (139), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query 15 FSGSDISVLVRDALFEPIRRCRTATAFKQVM--------VDGRAFYVPCRPDDSDPTTRR 66
+SG DIS+LV+DAL +P+RR ++AT FK V V PC P DP
Sbjct 255 YSGYDISILVKDALMQPVRRVQSATHFKHVSGPSPKDPNVIAHDLLTPCSP--GDPHAIA 312
Query 67 MTLMSVPSDRLLPPEVTMVGAKR 89
M + VP D+L P ++M R
Sbjct 313 MNWLDVPGDKLANPPLSMQDISR 335
> YPR173c
Length=437
Score = 53.9 bits (128), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query 15 FSGSDISVLVRDALFEPIRRCRTATAFKQVMV--DGRAFYVPCRPDDSDPTTRRMTLMSV 72
+SGSDI+V+V+DAL +PIR+ ++AT FK V D PC P D M+ +
Sbjct 334 YSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPCSPGDDGAI--EMSWTDI 391
Query 73 PSDRLLPPEVTM 84
+D L P++T+
Sbjct 392 EADELKEPDLTI 403
> At2g27600
Length=435
Score = 45.8 bits (107), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query 15 FSGSDISVLVRDALFEPIRRCRTATAFKQVMVDGRAFYVPCRPDDSDPTTRRMTLMSVP- 73
FSGSD+SV V+D LFEP+R+ + A F + DG ++PC P M ++
Sbjct 334 FSGSDVSVCVKDVLFEPVRKTQDAMFFFK-SPDGT--WMPCGPRHPGAIQTTMQDLATKG 390
Query 74 -SDRLLPPEVT 83
+++++PP +T
Sbjct 391 LAEKIIPPPIT 401
> Hs4758312
Length=617
Score = 29.3 bits (64), Expect = 1.8, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 13/52 (25%)
Query 58 DDSDPTTRRMTLMSVPSDRLLPPEV-------------TMVGAKRCTYCKLC 96
DDS P R +++ P R P V + A+ C +CK C
Sbjct 541 DDSIPVNRNLSIYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQNCVHCKTC 592
> YPL074w
Length=754
Score = 28.9 bits (63), Expect = 2.3, Method: Composition-based stats.
Identities = 11/19 (57%), Positives = 15/19 (78%), Gaps = 0/19 (0%)
Query 15 FSGSDISVLVRDALFEPIR 33
FSGSD++ L ++A EPIR
Sbjct 683 FSGSDLTSLAKEAAMEPIR 701
> Hs7657299
Length=479
Score = 28.5 bits (62), Expect = 2.8, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 0/30 (0%)
Query 1 YSTRFLLFCSLWFRFSGSDISVLVRDALFE 30
+ RF FC L+ FSG+D+ + RD L +
Sbjct 319 HRNRFSQFCRLFASFSGADLLKMSRDDLVQ 348
> Hs21361278
Length=502
Score = 28.5 bits (62), Expect = 3.0, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query 1 YSTRFLLFCSLWFRFSGSDISVLVRDALFE---PIRRCRTATAFKQVMVDGRAFYVPCR 56
+ RF F L+ FSG+D+ L RD + + P R A K MV R C+
Sbjct 338 HRNRFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQ 396
> HsM5032175
Length=450
Score = 28.5 bits (62), Expect = 3.1, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query 1 YSTRFLLFCSLWFRFSGSDISVLVRDALFE---PIRRCRTATAFKQVMVDGRAFYVPCR 56
+ RF F L+ FSG+D+ L RD + + P R A K MV R C+
Sbjct 287 HRNRFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQ 345
> At2g21460
Length=1333
Score = 28.5 bits (62), Expect = 3.4, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 0/59 (0%)
Query 13 FRFSGSDISVLVRDALFEPIRRCRTATAFKQVMVDGRAFYVPCRPDDSDPTTRRMTLMS 71
F+ +S++ D++ +RRC T + V + V R DD+ RR+ MS
Sbjct 369 FKLENGTLSIIAGDSVLLTVRRCYTLYLLQWRPVTEESLSVVKRQDDTILWHRRLGHMS 427
> At2g34560
Length=393
Score = 28.5 bits (62), Expect = 3.4, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 16/20 (80%), Gaps = 0/20 (0%)
Query 15 FSGSDISVLVRDALFEPIRR 34
+SGSDI +L ++A +P+RR
Sbjct 315 YSGSDIRILCKEAAMQPLRR 334
> At3g27120
Length=327
Score = 28.5 bits (62), Expect = 3.6, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 0/27 (0%)
Query 7 LFCSLWFRFSGSDISVLVRDALFEPIR 33
+ C+L +SGSD+ LV+DA P+R
Sbjct 245 IICNLTEGYSGSDMKNLVKDATMGPLR 271
> CE03750
Length=345
Score = 28.1 bits (61), Expect = 4.1, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%), Gaps = 0/22 (0%)
Query 36 RTATAFKQVMVDGRAFYVPCRP 57
+T AFK ++ GR++Y C+P
Sbjct 280 KTLEAFKDIISSGRSYYSMCKP 301
Lambda K H
0.332 0.142 0.467
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1198045380
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40