bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eace_2744_orf1 Length=97 Score E Sequences producing significant alignments: (Bits) Value Hs13994259 32.7 0.16 CE09115 29.6 1.5 Hs22050054 29.3 2.0 7291758 28.1 3.8 YBR251w 28.1 4.3 At5g26250 27.7 5.5 At2g23200 27.7 6.2 At4g30020 27.3 7.6 > Hs13994259 Length=430 Score = 32.7 bits (73), Expect = 0.16, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query 15 LLQTNRMMAMT-RQGRVYYYRSIVGLGNGRGLFGIGIGFGSKPKDSRSSAALNAIQRMQL 73 +L+ + MT ++GR R +V +GNG+G G IG + D+ A A+ + Sbjct 222 ILEVRNVFTMTAKEGRKKSIRVLVAVGNGKGAAGFSIGKATDRMDAFRKAKNRAVHHLHY 281 Query 74 ID 75 I+ Sbjct 282 IE 283 > CE09115 Length=418 Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Query 1 PIDPQLRLTELRQTLLQTNRMMAMTRQ-GRVYYYRSIVGLGNGRGLFGIGIGFGSKPKDS 59 P+D + + L+ R MT GRV+ ++V GNGRGL G + G P Sbjct 125 PLD-GVNFDDFETYCLEVKRTSNMTNVFGRVHTMSALVVTGNGRGLAGYAV--GKAPIHR 181 Query 60 RSSAALNAI 68 ++A +N + Sbjct 182 TTTAIINGM 190 > Hs22050054 Length=175 Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%) Query 43 RGLFGIGIGFGSKPKDSRSSAALNAIQRMQLIDIDAANILNTPQH 87 +GL + G + PKDSR +AA+ +Q Q I NIL+ P+H Sbjct 6 KGLGLVETGLQTSPKDSRPTAAM--LQCGQ--TIGRGNILSAPKH 46 > 7291758 Length=2175 Score = 28.1 bits (61), Expect = 3.8, Method: Composition-based stats. Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 0/23 (0%) Query 12 RQTLLQTNRMMAMTRQGRVYYYR 34 R+ L+TN M+ M QG V YYR Sbjct 1134 REESLKTNEMLKMRIQGAVVYYR 1156 > YBR251w Length=307 Score = 28.1 bits (61), Expect = 4.3, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query 2 IDPQLRLTELRQTLLQTNRMMAMTRQGRVYYYRSIVGLGNGRGLFGIGIGFGSKPKDSRS 61 +DP +L L R+ T +G++ + ++V +G+ G+ G+G G K ++ S Sbjct 135 VDPDYITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEG---KSREEMS 191 Query 62 SAALNA 67 A A Sbjct 192 KAIFKA 197 > At5g26250 Length=507 Score = 27.7 bits (60), Expect = 5.5, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 13/65 (20%) Query 28 GRVYYYRSIVGLGNGRGLFGIGIGFG--------SKPKDSRSSAALNAI-QRMQLIDIDA 78 G V Y I+G R L G G+GFG S+ +R LN + Q M I I Sbjct 127 GAVNIYMLIIG----RILLGFGVGFGNQAVPLFLSEIAPARLRGGLNIVFQLMVTIGILI 182 Query 79 ANILN 83 ANI+N Sbjct 183 ANIVN 187 > At2g23200 Length=834 Score = 27.7 bits (60), Expect = 6.2, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Query 32 YYRSIVGLGNGRGLFGIGIGFGSKPKDSRSSAALNAIQRMQLIDIDAANILN 83 +++ +V + +G GL I IG KD + LN ++ M+++ ++ N Sbjct 346 FFKDVVNVSDGSGLLNISIGTKEANKD---AGFLNGLEMMEVLSKSGSDYSN 394 > At4g30020 Length=816 Score = 27.3 bits (59), Expect = 7.6, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 0/36 (0%) Query 33 YRSIVGLGNGRGLFGIGIGFGSKPKDSRSSAALNAI 68 Y++ + LGNG+ L GIG+ ++P S + N + Sbjct 370 YKNHLTLGNGKMLAGIGLSPSTRPHRSYKMVSANDV 405 Lambda K H 0.321 0.137 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1198045380 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40