bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_2744_orf1
Length=97
Score E
Sequences producing significant alignments: (Bits) Value
Hs13994259 32.7 0.16
CE09115 29.6 1.5
Hs22050054 29.3 2.0
7291758 28.1 3.8
YBR251w 28.1 4.3
At5g26250 27.7 5.5
At2g23200 27.7 6.2
At4g30020 27.3 7.6
> Hs13994259
Length=430
Score = 32.7 bits (73), Expect = 0.16, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query 15 LLQTNRMMAMT-RQGRVYYYRSIVGLGNGRGLFGIGIGFGSKPKDSRSSAALNAIQRMQL 73
+L+ + MT ++GR R +V +GNG+G G IG + D+ A A+ +
Sbjct 222 ILEVRNVFTMTAKEGRKKSIRVLVAVGNGKGAAGFSIGKATDRMDAFRKAKNRAVHHLHY 281
Query 74 ID 75
I+
Sbjct 282 IE 283
> CE09115
Length=418
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query 1 PIDPQLRLTELRQTLLQTNRMMAMTRQ-GRVYYYRSIVGLGNGRGLFGIGIGFGSKPKDS 59
P+D + + L+ R MT GRV+ ++V GNGRGL G + G P
Sbjct 125 PLD-GVNFDDFETYCLEVKRTSNMTNVFGRVHTMSALVVTGNGRGLAGYAV--GKAPIHR 181
Query 60 RSSAALNAI 68
++A +N +
Sbjct 182 TTTAIINGM 190
> Hs22050054
Length=175
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query 43 RGLFGIGIGFGSKPKDSRSSAALNAIQRMQLIDIDAANILNTPQH 87
+GL + G + PKDSR +AA+ +Q Q I NIL+ P+H
Sbjct 6 KGLGLVETGLQTSPKDSRPTAAM--LQCGQ--TIGRGNILSAPKH 46
> 7291758
Length=2175
Score = 28.1 bits (61), Expect = 3.8, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 0/23 (0%)
Query 12 RQTLLQTNRMMAMTRQGRVYYYR 34
R+ L+TN M+ M QG V YYR
Sbjct 1134 REESLKTNEMLKMRIQGAVVYYR 1156
> YBR251w
Length=307
Score = 28.1 bits (61), Expect = 4.3, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query 2 IDPQLRLTELRQTLLQTNRMMAMTRQGRVYYYRSIVGLGNGRGLFGIGIGFGSKPKDSRS 61
+DP +L L R+ T +G++ + ++V +G+ G+ G+G G K ++ S
Sbjct 135 VDPDYITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEG---KSREEMS 191
Query 62 SAALNA 67
A A
Sbjct 192 KAIFKA 197
> At5g26250
Length=507
Score = 27.7 bits (60), Expect = 5.5, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 13/65 (20%)
Query 28 GRVYYYRSIVGLGNGRGLFGIGIGFG--------SKPKDSRSSAALNAI-QRMQLIDIDA 78
G V Y I+G R L G G+GFG S+ +R LN + Q M I I
Sbjct 127 GAVNIYMLIIG----RILLGFGVGFGNQAVPLFLSEIAPARLRGGLNIVFQLMVTIGILI 182
Query 79 ANILN 83
ANI+N
Sbjct 183 ANIVN 187
> At2g23200
Length=834
Score = 27.7 bits (60), Expect = 6.2, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query 32 YYRSIVGLGNGRGLFGIGIGFGSKPKDSRSSAALNAIQRMQLIDIDAANILN 83
+++ +V + +G GL I IG KD + LN ++ M+++ ++ N
Sbjct 346 FFKDVVNVSDGSGLLNISIGTKEANKD---AGFLNGLEMMEVLSKSGSDYSN 394
> At4g30020
Length=816
Score = 27.3 bits (59), Expect = 7.6, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 0/36 (0%)
Query 33 YRSIVGLGNGRGLFGIGIGFGSKPKDSRSSAALNAI 68
Y++ + LGNG+ L GIG+ ++P S + N +
Sbjct 370 YKNHLTLGNGKMLAGIGLSPSTRPHRSYKMVSANDV 405
Lambda K H
0.321 0.137 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1198045380
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40