bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_2480_orf1
Length=88
Score E
Sequences producing significant alignments: (Bits) Value
At3g50670 65.1 3e-11
CE01998 48.5 3e-06
7297205 42.4 2e-04
SPAC19A8.13 40.8 6e-04
Hs22050771 39.7 0.001
Hs4507119 39.7 0.001
Hs22055158 35.4 0.029
At2g43370 33.5 0.088
7293353 31.2 0.49
At4g36690 30.4 0.89
Hs16193855 30.0 0.96
At5g16780 28.9 2.3
Hs5902144 28.1 4.0
7299212 27.3 6.4
7295594 26.9 8.5
> At3g50670
Length=427
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 56/94 (59%), Gaps = 12/94 (12%)
Query 1 KIDGRRVLVDVERARTVPGWLPRRLGGGRGQPRG------AGKNQPDISSLVAQISAPPP 54
KIDGRRVLVDVER RTVP W PRRLGGG G R G+ QP +Q P
Sbjct 203 KIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGGEEIVGEQQP--QGRTSQSEEPSR 260
Query 55 SSDSKDKTRDRDRDRERDR----ERDRDRERDTP 84
+ ++K+R++ ++RER R E+ R+R RD P
Sbjct 261 PREEREKSREKGKERERSRELSHEQPRERSRDRP 294
> CE01998
Length=328
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%), Gaps = 0/33 (0%)
Query 1 KIDGRRVLVDVERARTVPGWLPRRLGGGRGQPR 33
K+DG+R++VD ER RT WLPRRLGGG+G R
Sbjct 164 KVDGKRLVVDYERGRTQKTWLPRRLGGGKGDTR 196
> 7297205
Length=448
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/23 (86%), Positives = 21/23 (91%), Gaps = 0/23 (0%)
Query 1 KIDGRRVLVDVERARTVPGWLPR 23
KID +RVLVDVERARTV GWLPR
Sbjct 167 KIDSKRVLVDVERARTVKGWLPR 189
> SPAC19A8.13
Length=261
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 21/23 (91%), Gaps = 0/23 (0%)
Query 2 IDGRRVLVDVERARTVPGWLPRR 24
++GRR++VDVER RTV GWLPR+
Sbjct 166 LNGRRIVVDVERGRTVKGWLPRK 188
> Hs22050771
Length=437
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/20 (90%), Positives = 18/20 (90%), Gaps = 0/20 (0%)
Query 1 KIDGRRVLVDVERARTVPGW 20
KIDGRRVLVDVER RTV GW
Sbjct 168 KIDGRRVLVDVERGRTVKGW 187
> Hs4507119
Length=614
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/20 (90%), Positives = 18/20 (90%), Gaps = 0/20 (0%)
Query 1 KIDGRRVLVDVERARTVPGW 20
KIDGRRVLVDVER RTV GW
Sbjct 345 KIDGRRVLVDVERGRTVKGW 364
> Hs22055158
Length=1514
Score = 35.4 bits (80), Expect = 0.029, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query 52 PPPSSDSKDKTRDR---DRDRERDRERDRDRERDTPSQR 87
PPP S SK++ D+ D+ RER RER++ E+D ++
Sbjct 1365 PPPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERK 1403
> At2g43370
Length=292
Score = 33.5 bits (75), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 0/22 (0%)
Query 2 IDGRRVLVDVERARTVPGWLPR 23
IDGR ++VD R + +PGW+PR
Sbjct 124 IDGREIIVDYNRQQLMPGWIPR 145
> 7293353
Length=1783
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%), Gaps = 0/26 (0%)
Query 57 DSKDKTRDRDRDRERDRERDRDRERD 82
D+K R+RDR+ ERDR+R+RD+ D
Sbjct 183 DTKSPCRERDRNLERDRDRERDKNDD 208
> At4g36690
Length=573
Score = 30.4 bits (67), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Query 54 PSSDSKDKTRD--RDRDRERDRERDRDRERDTPSQR 87
P +S+D R+ R +DRER++ RD+DRERD+ R
Sbjct 37 PKRESRDHERETSRSKDREREKGRDKDRERDSEVSR 72
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 0/26 (0%)
Query 57 DSKDKTRDRDRDRERDRERDRDRERD 82
DS+ R RDRD E+ +ER RD++RD
Sbjct 67 DSEVSRRSRDRDGEKSKERSRDKDRD 92
> Hs16193855
Length=478
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 0/24 (0%)
Query 59 KDKTRDRDRDRERDRERDRDRERD 82
KD +RD DR+RER RDR+RE D
Sbjct 379 KDSSRDWDRNRERSANRDREREAD 402
> At5g16780
Length=820
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 24/30 (80%), Gaps = 0/30 (0%)
Query 58 SKDKTRDRDRDRERDRERDRDRERDTPSQR 87
S+D+ +++D+++ER+R +DR+ ERD ++
Sbjct 91 SRDRVKEKDKEKERNRHKDRENERDNEKEK 120
> Hs5902144
Length=246
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Query 2 IDGRRVLVDVERARTVPGWLPRRLGGGR------GQPRGAGKNQP 40
ID + VD E RT+ GW+PRRLGGG GQ R G+++P
Sbjct 117 IDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRP 161
> 7299212
Length=874
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 17/19 (89%), Gaps = 0/19 (0%)
Query 59 KDKTRDRDRDRERDRERDR 77
KDK +DRDRD+ ++++RDR
Sbjct 178 KDKEKDRDRDKSKEKDRDR 196
Score = 27.3 bits (59), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%), Gaps = 0/26 (0%)
Query 57 DSKDKTRDRDRDRERDRERDRDRERD 82
D + K +++DRDR++ +E+DRDR D
Sbjct 174 DIRVKDKEKDRDRDKSKEKDRDRVTD 199
> 7295594
Length=720
Score = 26.9 bits (58), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%), Gaps = 0/25 (0%)
Query 57 DSKDKTRDRDRDRERDRERDRDRER 81
D +DK RD+ R+RE+D+ RD+ RE
Sbjct 47 DHRDKERDQRREREKDKSRDKKREH 71
Lambda K H
0.313 0.135 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1184307974
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40