bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eace_2470_orf1 Length=176 Score E Sequences producing significant alignments: (Bits) Value Hs20536216 157 1e-38 At1g80930 146 3e-35 SPBC13E7.01 144 1e-34 CE17753 125 4e-29 YGR278w 90.1 2e-18 > Hs20536216 Length=908 Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 72/121 (59%), Positives = 86/121 (71%), Gaps = 0/121 (0%) Query 3 FKRQYTLAHRLETAKLRNTAKFFAHLLTSDAVPWSVLEVFELTEEKTTSSGRIFLKVLLQ 62 FK QY HRLET KLRN AK FAHLL +D++PWSVLE +L+EE TTSS RIF+K+ Q Sbjct 529 FKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQ 588 Query 63 DTAETMGLKTLYERLMHPDLKPYVKGLFPEDNPRSLRFCINFFTAIGLGGLTDNQRQILA 122 + E MGL L RL L+P+ +GL P DNPR+ RF INFFT+IGLGGLTD R+ L Sbjct 589 ELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLK 648 Query 123 G 123 Sbjct 649 N 649 > At1g80930 Length=900 Score = 146 bits (368), Expect = 3e-35, Method: Composition-based stats. Identities = 71/137 (51%), Positives = 102/137 (74%), Gaps = 2/137 (1%) Query 1 EAFKRQYTLAHRLETAKLRNTAKFFAHLLTSDAVPWSVLEVFELTEEKTTSSGRIFLKVL 60 + F +QY++ HRLET KLRN AKFFAHLL +DA+PW VL LTEE TTSS RIF+K+L Sbjct 722 KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKIL 781 Query 61 LQDTAETMGLKTLYERLMHPDLKPYVKGLFPEDNPRSLRFCINFFTAIGLGGLTDNQRQI 120 Q+ +E +G++ L ERL P ++ ++ +FP+DNP++ RF INFFT+IGLGG+T+N R+ Sbjct 782 FQELSEHLGIRLLNERLQDPTMQESLESIFPKDNPKNTRFAINFFTSIGLGGITENLREY 841 Query 121 LAGLQHQAHLQQQQQQL 137 L + + + Q+Q+Q+ Sbjct 842 LKNM--PSLIMQRQKQV 856 > SPBC13E7.01 Length=628 Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 71/160 (44%), Positives = 95/160 (59%), Gaps = 15/160 (9%) Query 1 EAFKRQYTLAHRLETAKLRNTAKFFAHLLTSDAVPWSVLEVFELTEEKTTSSGRIFLKVL 60 + FK Y HR ET +LRN A FFA+LL++D++ W V + LTE+ TT+S RIFLK++ Sbjct 484 QCFKNYYETIHRYETNRLRNIALFFANLLSTDSIGWEVYDCVRLTEDDTTASSRIFLKIM 543 Query 61 LQDTAETMGLKTLYERLMHPDLKPYVKGLFPEDNPRSLRFCINFFTAIGLGGLTDNQRQI 120 Q+ E +GLK+L ERL P+L PY+ GLFP D R++RF IN+FT+IGLG LT+ R+ Sbjct 544 FQEIVEALGLKSLVERLHDPNLVPYLHGLFPVDEARNVRFSINYFTSIGLGALTEEMREY 603 Query 121 LAGLQHQAHLQQQQQQLRQPSSSSSSSSSSSSSSSSSSSS 160 L L P S S SS S + S Sbjct 604 L---------------LTMPKSEPKEQDSEGYSSGSETGS 628 > CE17753 Length=897 Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 55/108 (50%), Positives = 72/108 (66%), Gaps = 0/108 (0%) Query 7 YTLAHRLETAKLRNTAKFFAHLLTSDAVPWSVLEVFELTEEKTTSSGRIFLKVLLQDTAE 66 Y+ HR++ KLRN A+ AHLL++DA+ W +L ++TEE TTSSGRI++K + + E Sbjct 564 YSTIHRIDITKLRNLARLIAHLLSTDAIDWKILADMKMTEEDTTSSGRIYIKYIFNELVE 623 Query 67 TMGLKTLYERLMHPDLKPYVKGLFPEDNPRSLRFCINFFTAIGLGGLT 114 MG+ L+ R+ P L GLFP NP S RF INFFT IGLGGLT Sbjct 624 AMGMVKLHSRVTDPTLAHCFVGLFPRTNPNSARFSINFFTMIGLGGLT 671 > YGR278w Length=577 Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/127 (40%), Positives = 74/127 (58%), Gaps = 6/127 (4%) Query 1 EAFKRQYTL-AHRLETAKLRNTAKFFAHLLTSDAVPWSVLEVFELTEEKTTSSGRIFLKV 59 E F++ YT ET +LR KF+ HL++ + +P L++ +LTEE++ GRIF+K Sbjct 363 ETFEQNYTQDIEDYETDQLRILGKFWGHLISYEFLPMDCLKIIKLTEEESCPQGRIFIKF 422 Query 60 LLQDTAETMGLKTLYERLMHPDLKPYVKGLFP-EDNPRSLRFCINFFTAIGLGGLTDNQR 118 L Q+ +GL L RL L G+FP E + +R+ INFFTAIGLG LT++ R Sbjct 423 LFQELVNELGLDELQLRLNSSKL----DGMFPLEGDAEHIRYSINFFTAIGLGLLTEDMR 478 Query 119 QILAGLQ 125 L +Q Sbjct 479 SRLTIIQ 485 Lambda K H 0.310 0.121 0.325 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2707167450 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40