bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_2341_orf1
Length=95
Score E
Sequences producing significant alignments: (Bits) Value
Hs18570074 47.4 6e-06
Hs22066480 47.0 9e-06
CE16405 47.0 9e-06
Hs19923193 46.6 1e-05
Hs17434275 44.3 5e-05
Hs18579832 42.4 2e-04
Hs20480366 41.2 4e-04
At3g17870 38.5 0.003
Hs20536637 38.5 0.003
Hs17489322 35.8 0.018
Hs22041057 33.1 0.13
Hs22064521 28.9 2.6
7295425 26.9 8.9
> Hs18570074
Length=369
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 0/39 (0%)
Query 57 KITELEAFVTLARNDPSILHRPELAFFKEYLLSLGAKLP 95
K+ EL AFV + + DPSILH E+ F +E++ S+G K+P
Sbjct 5 KVNELRAFVKMCKQDPSILHTEEMRFLREWVESMGGKVP 43
> Hs22066480
Length=369
Score = 47.0 bits (110), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 0/39 (0%)
Query 57 KITELEAFVTLARNDPSILHRPELAFFKEYLLSLGAKLP 95
K+ EL AFV + + DPS+LH E+ F +E++ S+G K+P
Sbjct 5 KVNELRAFVKMCKQDPSVLHTEEMRFLREWVESMGGKVP 43
> CE16405
Length=422
Score = 47.0 bits (110), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 29/40 (72%), Gaps = 0/40 (0%)
Query 56 DKITELEAFVTLARNDPSILHRPELAFFKEYLLSLGAKLP 95
D + L+ FV + + +P++LH PE FFK+YL+SLGA LP
Sbjct 2 DHVALLKQFVGMCQANPAVLHAPEFGFFKDYLVSLGATLP 41
> Hs19923193
Length=369
Score = 46.6 bits (109), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 0/39 (0%)
Query 57 KITELEAFVTLARNDPSILHRPELAFFKEYLLSLGAKLP 95
K+ EL AFV + + DPS+LH E+ F +E++ S+G K+P
Sbjct 5 KVNELRAFVKMCKQDPSVLHTEEMRFLREWVESMGGKVP 43
> Hs17434275
Length=369
Score = 44.3 bits (103), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 28/39 (71%), Gaps = 0/39 (0%)
Query 57 KITELEAFVTLARNDPSILHRPELAFFKEYLLSLGAKLP 95
K+ +L AFV + + DPS+LH E+ F +E++ S+G K+P
Sbjct 5 KVNKLRAFVKMCKEDPSVLHTEEMRFLREWVESMGGKVP 43
> Hs18579832
Length=184
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 9/55 (16%)
Query 41 FPNLFPFEIMALFGEDKITELEAFVTLARNDPSILHRPELAFFKEYLLSLGAKLP 95
+PN E+ L AFV + + D S+LH E+ F +E++ S+G+K+P
Sbjct 40 YPNALQIEV---------NTLRAFVKMCKQDLSVLHTKEMCFLREWVESMGSKVP 85
> Hs20480366
Length=369
Score = 41.2 bits (95), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 0/39 (0%)
Query 57 KITELEAFVTLARNDPSILHRPELAFFKEYLLSLGAKLP 95
K+ EL AFV + + DPSILH E+ F +E++ S K+P
Sbjct 5 KVNELWAFVKMCKQDPSILHTEEMHFLREWVESTVGKVP 43
> At3g17870
Length=281
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 14/53 (26%)
Query 57 KITELEAFVTLARNDPSILHRPELAFFKEYL--------------LSLGAKLP 95
++ EL FV + +PSILH P L FFKEYL SLGA++P
Sbjct 6 QVAELRRFVEQLKLNPSILHDPSLVFFKEYLRSFFVIDARSRLIVYSLGAQVP 58
> Hs20536637
Length=236
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 0/34 (0%)
Query 57 KITELEAFVTLARNDPSILHRPELAFFKEYLLSL 90
K+ EL AFV + + D S+LH E+ F +E++ SL
Sbjct 5 KVNELRAFVNMCKQDLSVLHTEEMCFLREWVESL 38
> Hs17489322
Length=316
Score = 35.8 bits (81), Expect = 0.018, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 0/39 (0%)
Query 57 KITELEAFVTLARNDPSILHRPELAFFKEYLLSLGAKLP 95
K+ EL AFV + DPS+ H ++ F +E + S+ K+P
Sbjct 5 KVNELRAFVKTCKQDPSVPHAEKMHFLRERVESMAGKVP 43
> Hs22041057
Length=299
Score = 33.1 bits (74), Expect = 0.13, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 0/39 (0%)
Query 57 KITELEAFVTLARNDPSILHRPELAFFKEYLLSLGAKLP 95
K EL AFV + + D S+ + E+ F +E++ S+ K+P
Sbjct 181 KANELRAFVKMCKQDLSVPYTKEMRFLREWVESMAGKVP 219
> Hs22064521
Length=325
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 0/47 (0%)
Query 19 GPVPRQCGVVLSCFVTPQGERRFPNLFPFEIMALFGEDKITELEAFV 65
GP P G++ + V+P FP PF++ ALF ++ A +
Sbjct 82 GPSPPTVGMLSALAVSPARSLHFPWSLPFDLEALFQRLSVSRRWALI 128
> 7295425
Length=261
Score = 26.9 bits (58), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query 4 VSTSNK--EPVNPTRTEGPVPRQCGVVLSCFVTPQGERRFPNLFP 46
+ST N + VN R G VP C ++ + F TP R N FP
Sbjct 193 MSTGNTVLQAVNVLREHG-VPESCIILSNLFCTPIAARTVVNAFP 236
Lambda K H
0.321 0.141 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1161385214
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40