bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_2239_orf2
Length=56
Score E
Sequences producing significant alignments: (Bits) Value
SPAC6G10.02c_1 33.5 0.095
YAL056w 33.5 0.11
Hs14744278 32.0 0.30
7290098 31.6 0.34
At4g03080_1 31.6 0.36
SPCC1223.06 31.6 0.38
At1g51550 31.2 0.50
Hs7019405 30.4 0.90
7301756 29.3 1.8
YOR371c 28.9 2.6
7295586 28.5 3.4
At1g03445_1 28.1 3.9
At1g74150 28.1 4.5
Hs5032015 28.1 4.6
YGR238c 28.1 4.6
At5g01660_2 27.7 5.2
At3g05420_2 27.7 6.0
At4g04670_2 27.3 7.7
> SPAC6G10.02c_1
Length=343
Score = 33.5 bits (75), Expect = 0.095, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query 2 RSCHA-SVVFEKVFVHGGMSGDTVLDDMWMWDGE--EWSQVR 40
RS H+ ++V K+FVHGG + L D+W++D E W++VR
Sbjct 248 RSNHSVTLVQGKIFVHGGHNDTGPLSDLWLFDLETLSWTEVR 289
> YAL056w
Length=847
Score = 33.5 bits (75), Expect = 0.11, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query 9 VFEKVFVHGGMSGDTVLDDMWMWD--GEEWSQV 39
V + V +HGG +G VLDDMW+ D E W+ +
Sbjct 688 VGKTVVLHGGSNGLNVLDDMWLMDLECETWTPI 720
> Hs14744278
Length=299
Score = 32.0 bits (71), Expect = 0.30, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query 2 RSCHASV-VFEKVFVHGGMSGDTVLDDMWMWDGEEWSQVRYDKST-EPMLARCG 53
R CH+ V + VF+ GG +G+ +L D+W + + + V+ + EP+ C
Sbjct 173 RRCHSCVQIKNDVFICGGYNGEVILGDIWKLNLQTFQWVKLPATMPEPVYFHCA 226
> 7290098
Length=975
Score = 31.6 bits (70), Expect = 0.34, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
Query 2 RSCHASVVFE-KVFVHGGMSGDTVLDDMWMWD--GE-EWSQV 39
RS H + V++ K++++ G G+ L+DMW + GE +W +V
Sbjct 359 RSAHGAAVYDNKMWIYAGYDGNARLNDMWTLNLTGENQWEEV 400
Score = 28.5 bits (62), Expect = 3.1, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query 1 KRSCHASVVF-EKVFVHGGMSGDTVLDDMWMWDGEEWSQVRYDKSTEPMLARCGHSA 56
KRS H V + + +FV GG +G +L+D+ + ++ S R + P R HSA
Sbjct 251 KRSKHTVVAYKDAMFVFGGDNGKNMLNDLIRFGVKDKSWGRACATGTPPAPRYHHSA 307
> At4g03080_1
Length=533
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query 2 RSCH--ASVVFEKVFVHGGMSGDTVLDDMWMWDGEEWSQVRYDKSTEPMLA 50
R C A+ V +++VHGG+ GD +LDD + E S + D S+ P+LA
Sbjct 330 RRCRHGAASVGIRIYVHGGLRGDVLLDDFLV---AENSTFQSDISS-PLLA 376
> SPCC1223.06
Length=1147
Score = 31.6 bits (70), Expect = 0.38, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query 2 RSCHASVVF-EKVFVHGGMSGDTVLDDMWMWDGEE--WSQVR-YDKSTEPMLARCGHSA 56
R+ H + F +K+++ GG G +D+W + ++ WS+V + + P R GH+A
Sbjct 243 RAGHVAFTFSDKLYIFGGTDGANFFNDLWCYHPKQSAWSKVETFGVAPNP---RAGHAA 298
> At1g51550
Length=478
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 9/55 (16%)
Query 11 EKVFVHGGMS-GDTVLDDMWMWDGEE-----WSQVRYDKSTEP---MLARCGHSA 56
+V + GG G VLDD+W+ D +E W Q+ YD P L R GHSA
Sbjct 300 NQVVLFGGRGLGYDVLDDVWILDIQEPCEEKWIQIFYDFQDVPEYASLPRVGHSA 354
> Hs7019405
Length=792
Score = 30.4 bits (67), Expect = 0.90, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 12/64 (18%)
Query 2 RSCHASVVF-------EKVFVHGGMSGDTVLDDMWMWDGE--EWSQVRYDKSTEPMLARC 52
R H +V++ K++V GGM G LDD+W D E WS+ K T P L R
Sbjct 190 RESHTAVIYCKKDSGSPKMYVFGGMCG-ARLDDLWQLDLETMSWSKPE-TKGTVP-LPRS 246
Query 53 GHSA 56
H+A
Sbjct 247 LHTA 250
> 7301756
Length=1020
Score = 29.3 bits (64), Expect = 1.8, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query 4 CHASVVFEKVFVHGGMSGDTVLDDM--WMWDGEEWSQV 39
CH + V F+H G + D L D W+ W+++
Sbjct 380 CHTATVIANAFMHSGTTSDQFLRDNLDWLARATNWAKL 417
> YOR371c
Length=897
Score = 28.9 bits (63), Expect = 2.6, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 10/50 (20%)
Query 16 HGGMSGDTVLDDMWM--WDGEEWSQVR-YDKSTE------PM-LARCGHS 55
HGG G V DMW +D E W+++ Y K+ E P+ L GHS
Sbjct 719 HGGSDGYDVCSDMWWFDFDSETWTKIDLYAKTQEESDGLVPINLCMVGHS 768
> 7295586
Length=616
Score = 28.5 bits (62), Expect = 3.4, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query 2 RSCHASVVF-EKVFVHGGMSGDTVLDDMWMWD--GEEWSQV 39
RS HA VV +K+++ GG+ +L MW++D E W ++
Sbjct 448 RSQHAGVVVGDKLYISGGVHLANILASMWVFDTKTEVWQEL 488
> At1g03445_1
Length=472
Score = 28.1 bits (61), Expect = 3.9, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query 1 KRSCHASVVF-EKVFVHGGMSGDTVLDDM 28
+R HA+ F ++VHGG+ D +LDD+
Sbjct 321 RRCHHAAASFGSHLYVHGGIREDVLLDDL 349
> At1g74150
Length=552
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query 2 RSCHA-SVVFEKVFVHGGMSGDTVLDDMWMWDGEEWSQVRYDKSTEPMLARCGHSA 56
R H+ + V + +FV GG G L+D+ + D + +R D E R HSA
Sbjct 75 RDSHSCTTVGDNLFVFGGTDGTKYLNDVHILDTYSHTWIRPDIRGEGPRVREAHSA 130
> Hs5032015
Length=372
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 0/21 (0%)
Query 12 KVFVHGGMSGDTVLDDMWMWD 32
K+F+HGG++GD DD+ D
Sbjct 204 KLFIHGGLAGDRFYDDLHCID 224
> YGR238c
Length=882
Score = 28.1 bits (61), Expect = 4.6, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query 12 KVFVHGGMSGDTVLDDMWM----WDGEEWSQVRYDKSTEPMLARCGHSA 56
++FV GG+ +V D+W DG ++ R D R GH++
Sbjct 99 RIFVTGGLHDQSVYGDVWQIAANADGTSFTSKRIDIDQNTPPPRVGHAS 147
> At5g01660_2
Length=301
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query 1 KRSCHASVVF-EKVFVHGGMSGDTVLDDMWMWDGEEWSQVRYDKSTEPMLARCGHSA 56
+R CH+ VV EK++ GG G+T++ + +++ + + + EPM G+SA
Sbjct 196 RRGCHSLVVLNEKLYAIGGFDGETMVSSVEIYEPRTGTWM----TGEPMKDLRGYSA 248
> At3g05420_2
Length=429
Score = 27.7 bits (60), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 10/60 (16%)
Query 6 ASVVFEKVFVHGGMSGDTVLDDMWMWDGEEWSQVRY---------DKSTEPMLARC-GHS 55
A+V+ +K++++GG L D+ + D + W+ R + ST +LA C GHS
Sbjct 86 AAVIQDKMYIYGGNHNGRYLGDLHVLDLKSWTWSRVETKVATESQETSTPTLLAPCAGHS 145
> At4g04670_2
Length=506
Score = 27.3 bits (59), Expect = 7.7, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query 2 RSCHASVVF-EKVFVHGGMSGDTVLDDMWMWDGEEWS 37
R HA V + + F+ GG +G+ VL+D++ +D + S
Sbjct 226 RHSHAMVAYGSQSFMFGGYNGENVLNDLYSFDVQSCS 262
Lambda K H
0.320 0.132 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1194096762
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40