bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eace_2095_orf2 Length=104 Score E Sequences producing significant alignments: (Bits) Value At5g41010 67.8 5e-12 CE20710 63.9 7e-11 YHR143w-a 57.8 5e-09 SPBC19C2.03 56.6 1e-08 Hs4826924 55.1 3e-08 At1g53690 45.8 2e-05 At4g00450 31.2 0.46 Hs20472538 29.3 2.1 7293410 27.7 4.7 > At5g41010 Length=51 Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 28/46 (60%), Positives = 38/46 (82%), Gaps = 0/46 (0%) Query 59 EPVTYICGECGCDVTLQPTAAVRCRSCGSRILYKKRSRKMMQYEAR 104 EPVTY+CG+CG + TL+ ++CR CG RILYKKR+R+++QYEAR Sbjct 6 EPVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 51 > CE20710 Length=62 Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 0/44 (0%) Query 61 VTYICGECGCDVTLQPTAAVRCRSCGSRILYKKRSRKMMQYEAR 104 + YICGEC + ++P A+RCR CG RILYKKR RK+M Y+AR Sbjct 19 MIYICGECHAENEIKPKDAIRCRECGYRILYKKRCRKLMVYDAR 62 > YHR143w-a Length=70 Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 15/77 (19%) Query 28 PTTAGATAAAGTTTAAAAAAKMEIEDNNTQLEPVTYICGECGCDVTLQPTAAVRCRSCGS 87 PT A AAAGT+ A A K YIC EC ++L T AVRC+ CG Sbjct 9 PTNLDA-AAAGTSQARTATLK--------------YICAECSSKLSLSRTDAVRCKDCGH 53 Query 88 RILYKKRSRKMMQYEAR 104 RIL K R+++++Q+EAR Sbjct 54 RILLKARTKRLVQFEAR 70 > SPBC19C2.03 Length=63 Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 32/44 (72%), Gaps = 0/44 (0%) Query 61 VTYICGECGCDVTLQPTAAVRCRSCGSRILYKKRSRKMMQYEAR 104 + Y+C +CG T+Q +RCR CG R++YK R+++M+Q+EAR Sbjct 20 MIYLCADCGARNTIQAKEVIRCRECGHRVMYKMRTKRMVQFEAR 63 > Hs4826924 Length=58 Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 34/46 (73%), Gaps = 0/46 (0%) Query 59 EPVTYICGECGCDVTLQPTAAVRCRSCGSRILYKKRSRKMMQYEAR 104 +P+ YICGEC + ++ +RCR CG RI+YKKR+++++ ++AR Sbjct 13 QPMIYICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR 58 > At1g53690 Length=61 Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 0/42 (0%) Query 53 DNNTQLEPVTYICGECGCDVTLQPTAAVRCRSCGSRILYKKR 94 D+ + V Y+CG+CG + L+ +CR CG RILYKKR Sbjct 9 DDKQPEQLVIYVCGDCGQENILKRGDVFQCRDCGFRILYKKR 50 > At4g00450 Length=2124 Score = 31.2 bits (69), Expect = 0.46, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 8/95 (8%) Query 4 GLSTSAATVATATAAARGSAAAGTPTTAGATAAAGTTT------AAAAAAKMEIEDNNTQ 57 G ++S + +++ + R G+P+ A ++A T T AA A+ + Sbjct 1823 GTASSGSEISSNKGSTRKGLRGGSPSLARRSSANTTDTSPPPSPAALRASMSLRLQFLLR 1882 Query 58 LEPVTYICGECGCDVTLQPTAAVRCRSCGSRILYK 92 L PV ICGE T A+ R GSR++Y+ Sbjct 1883 LLPV--ICGEPSFKNTRHALASTIVRLLGSRVVYE 1915 > Hs20472538 Length=273 Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust. Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 0/27 (0%) Query 63 YICGECGCDVTLQPTAAVRCRSCGSRI 89 Y+CG+CG T + + AV RSC R+ Sbjct 245 YLCGQCGKSFTQRGSLAVHQRSCSQRL 271 > 7293410 Length=531 Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust. Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 0/34 (0%) Query 30 TAGATAAAGTTTAAAAAAKMEIEDNNTQLEPVTY 63 +AG+TAA G+TTA A A+ +N+ + P +Y Sbjct 131 SAGSTAAGGSTTAGATASSTATNNNHIYVNPHSY 164 Lambda K H 0.312 0.119 0.335 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1174332180 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40