bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_2094_orf4
Length=80
Score E
Sequences producing significant alignments: (Bits) Value
YDL140c 89.4 2e-18
SPBC28F2.12 88.2 3e-18
7292659 82.0 2e-16
CE28300 80.1 9e-16
Hs4505939 79.0 2e-15
ECU03g0290 72.0 2e-13
At4g35800 70.9 5e-13
7293125 66.6 1e-11
YOR116c 66.2 1e-11
CE04196 66.2 2e-11
ECU07g0090 63.9 7e-11
SPBC4C3.05c 62.4 2e-10
At5g60040 62.4 2e-10
Hs5902062 62.0 3e-10
YOR341w 62.0 3e-10
SPBC651.08c 60.8 6e-10
7303170 60.1 1e-09
CE22157 57.4 6e-09
At3g57660 54.3 5e-08
ECU04g1400 53.1 1e-07
Hs7661686 46.2 2e-05
At1g63020_1 38.1 0.004
At2g40030 34.7 0.042
Hs20540981 29.6 1.4
Hs21362005 28.5 2.8
7293299 27.7 5.9
7294546 27.3 6.9
> YDL140c
Length=1733
Score = 89.4 bits (220), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/59 (72%), Positives = 49/59 (83%), Gaps = 0/59 (0%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYVIR 59
ARTVI+GDPNL +D VGVPKSIA TLTYPE VT NI++L +LV+ GP E PGAKYVIR
Sbjct 349 ARTVISGDPNLELDQVGVPKSIAKTLTYPEVVTPYNIDRLTQLVRNGPNEHPGAKYVIR 407
> SPBC28F2.12
Length=1752
Score = 88.2 bits (217), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/59 (71%), Positives = 49/59 (83%), Gaps = 0/59 (0%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYVIR 59
ARTVITGDPNL +D +GVP+SIA TLTYPE VT NI +L+ELV+ GP E PGAKY+IR
Sbjct 355 ARTVITGDPNLSLDELGVPRSIAKTLTYPETVTPYNIYQLQELVRNGPDEHPGAKYIIR 413
> 7292659
Length=1887
Score = 82.0 bits (201), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/59 (62%), Positives = 49/59 (83%), Gaps = 0/59 (0%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYVIR 59
ARTVIT DPNL ID VGVP+SIA LT+PE VT NI++++ELV++G ++PGAKY++R
Sbjct 355 ARTVITPDPNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMQELVRRGNSQYPGAKYIVR 413
> CE28300
Length=1852
Score = 80.1 bits (196), Expect = 9e-16, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 45/55 (81%), Gaps = 0/55 (0%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAK 55
ARTVIT DPNLPID VGVP++IA LT+PE VT N++KL+ELV +G ++PGAK
Sbjct 357 ARTVITADPNLPIDTVGVPRTIAQNLTFPEIVTPFNVDKLQELVNRGDTQYPGAK 411
> Hs4505939
Length=1970
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/59 (62%), Positives = 48/59 (81%), Gaps = 0/59 (0%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYVIR 59
ARTVIT DPNL ID VGVP+SIA +T+ E VT NI++L+ELV++G ++PGAKY+IR
Sbjct 363 ARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIR 421
> ECU03g0290
Length=1599
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 44/59 (74%), Gaps = 0/59 (0%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYVIR 59
ARTVIT DPN+ ++ VGVP IA T+PE VT NI++L++LV+ GP E PGA YV+R
Sbjct 320 ARTVITPDPNISLEEVGVPLEIAKIHTFPEKVTSFNIDRLEKLVRAGPNEHPGANYVLR 378
> At4g35800
Length=1840
Score = 70.9 bits (172), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/62 (62%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWP---GAKYV 57
ARTVIT DP + ID +GVP SIA+ LTYPE VT NI +LKELV GP P GAKY+
Sbjct 361 ARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKTGAKYI 420
Query 58 IR 59
IR
Sbjct 421 IR 422
> 7293125
Length=1259
Score = 66.6 bits (161), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 46/79 (58%), Gaps = 0/79 (0%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYVIRL 60
RTVI+ DPNL I+ VGVP +A LTYPE V NI ++ELV+ GP PGA YV +
Sbjct 364 GRTVISPDPNLMINQVGVPVRVAKILTYPERVNPANIRHMRELVRNGPSMHPGANYVQQR 423
Query 61 LLLFKALIINPTQETQEQE 79
FK + +E QE
Sbjct 424 GSSFKKYLAYGNREKVAQE 442
> YOR116c
Length=1460
Score = 66.2 bits (160), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 0/59 (0%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYVIR 59
RTVI+ DPNL ID V VP +A LTYPE VT N +KL+EL+ GP PGA Y+++
Sbjct 377 GRTVISPDPNLSIDEVAVPDRVAKVLTYPEKVTRYNRHKLQELIVNGPNVHPGANYLLK 435
> CE04196
Length=1388
Score = 66.2 bits (160), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 0/58 (0%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYVI 58
RTVI+ DPNL ID VGVP +AMTLT+PE V NI K+++LV G PGA Y++
Sbjct 361 GRTVISPDPNLRIDQVGVPIHVAMTLTFPEIVNASNIEKMRQLVINGSDVHPGANYLV 418
> ECU07g0090
Length=1349
Score = 63.9 bits (154), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 0/58 (0%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYVI 58
RTVI+ DPNL I+ VG+P+ +A LT E VT LN KL+ LV GP +PGA YV+
Sbjct 374 GRTVISPDPNLSIEEVGIPERMAKILTISERVTRLNRRKLQALVLNGPENYPGANYVV 431
> SPBC4C3.05c
Length=1689
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 0/57 (0%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYV 57
AR+VI+ DPN+ + +GVP A LTYPE VT N N+++ V GP +WPGA ++
Sbjct 488 ARSVISPDPNIETNEIGVPPVFATKLTYPEPVTLYNFNEMRNAVINGPHKWPGASHI 544
> At5g60040
Length=1328
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 0/57 (0%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYV 57
RTVI+ DPNL I VG+P +A LT+PE V+ NI KL++ V+ GP ++PGA+ V
Sbjct 366 GRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYPGARNV 422
> Hs5902062
Length=1391
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 0/79 (0%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYVIRL 60
RTVI+ DPNL ID V VP +A LT+PE V NIN L++LV+ GP PGA ++ +
Sbjct 365 GRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVQNGPEVHPGANFIQQR 424
Query 61 LLLFKALIINPTQETQEQE 79
K + +E QE
Sbjct 425 HTQMKRFLKYGNREKMAQE 443
> YOR341w
Length=1664
Score = 62.0 bits (149), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 0/57 (0%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYV 57
AR+VI+ DPN+ + +GVP A+ LTYPE VT NI +L++ V GP +WPGA +
Sbjct 480 ARSVISPDPNIETNEIGVPPVFAVKLTYPEPVTAYNIAELRQAVINGPDKWPGATQI 536
> SPBC651.08c
Length=1405
Score = 60.8 bits (146), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 37/58 (63%), Gaps = 0/58 (0%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYVI 58
RTVI+ DPNL ID V VP IA LT+PE VT N L++ ++ GP PGA YVI
Sbjct 359 GRTVISPDPNLRIDQVAVPYRIAKILTFPERVTTQNKKHLQDCIRNGPDVHPGANYVI 416
> 7303170
Length=1642
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 0/57 (0%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYV 57
ARTVIT DPN+ +D +G+P A L+YP VT N+ +L+++V GP PGA Y+
Sbjct 423 ARTVITPDPNINVDEIGIPDIFAKKLSYPVPVTEWNVTELRKMVMNGPDVHPGANYI 479
> CE22157
Length=1737
Score = 57.4 bits (137), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 0/57 (0%)
Query 2 RTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYVI 58
R+VIT DP L ID +G+P A LT+ E V N+N++K L+++GP + PGA + +
Sbjct 481 RSVITPDPYLDIDEIGIPDIFAKKLTFTEPVNAFNVNEMKGLLRQGPHQHPGANFFV 537
> At3g57660
Length=1670
Score = 54.3 bits (129), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 0/55 (0%)
Query 2 RTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKY 56
R+VI+ DP + ++ +G+P A+ LTYPE VT N+ KL+E + GP PGA +
Sbjct 451 RSVISPDPYIAVNDIGIPPCFALKLTYPERVTPWNVEKLREAIINGPDIHPGATH 505
> ECU04g1400
Length=1395
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYV 57
ARTVI+ DPNL +G+P A LT+PE N+++LK+ V GP +PG+ Y+
Sbjct 354 ARTVISPDPNLETREIGIPLVFAEALTFPERAASFNVDRLKKAVVNGP-TYPGSLYL 409
> Hs7661686
Length=1717
Score = 46.2 bits (108), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 0/58 (0%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYVI 58
AR+VI D + + +G+P A LTYP+ VT N+ +L++ V GP PGA VI
Sbjct 441 ARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVINGPNVHPGASMVI 498
> At1g63020_1
Length=1316
Score = 38.1 bits (87), Expect = 0.004, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 0/39 (0%)
Query 2 RTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKL 40
RTV+ GDP+L ++ +G+P+SIA L E + N +L
Sbjct 323 RTVVVGDPSLKLNEIGIPESIAKRLQVSEHLNQCNKERL 361
> At2g40030
Length=888
Score = 34.7 bits (78), Expect = 0.042, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 0/44 (0%)
Query 1 ARTVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELV 44
+R+VITGD ++ VG+P IA +T+ E V+ N L++LV
Sbjct 275 SRSVITGDAYRHVNEVGIPIEIAQRITFEERVSVHNRGYLQKLV 318
> Hs20540981
Length=366
Score = 29.6 bits (65), Expect = 1.4, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query 18 VPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYVIRLLLL 63
+ +S+ + LT+PE+ + I K ++ GP PG +Y + ++ +
Sbjct 168 IKESVELPLTHPEYYEEMGIKPPKGVIHYGP---PGTEYALSIMFI 210
> Hs21362005
Length=367
Score = 28.5 bits (62), Expect = 2.8, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 0/42 (0%)
Query 3 TVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELV 44
T ITGDPN+P V + + P+ N N+L +V
Sbjct 157 TKITGDPNIPAGQQTVEIDLRHRIQLPDLENQRNFNELSRIV 198
> 7293299
Length=351
Score = 27.7 bits (60), Expect = 5.9, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query 3 TVITGDPNLPIDVVGVPKSIAMTLTYPEFVTHLNINKLKELVKKGPLEWPGAKYVIRLLL 62
T T DP +D + +IAM HL ++E++K G K ++ +L
Sbjct 278 TFATLDPTHLVDCIRREAAIAMV--------HLEDEHVEEIIKSIDASASGCKSILAKVL 329
Query 63 LFKALIINPTQETQE 77
L+ II +Q+T +
Sbjct 330 LYGKPIIADSQDTDQ 344
> 7294546
Length=518
Score = 27.3 bits (59), Expect = 6.9, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 0/29 (0%)
Query 45 KKGPLEWPGAKYVIRLLLLFKALIINPTQ 73
KK +W K +R +LL+K++I+NP +
Sbjct 332 KKNEEKWLMLKENLRYMLLYKSIILNPNE 360
Lambda K H
0.318 0.138 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1165602088
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40