bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_1277_orf3
Length=303
Score E
Sequences producing significant alignments: (Bits) Value
SPBC12C2.12c 42.7 8e-04
Hs5729842 37.4 0.042
YML004c 35.0 0.19
HsM14211939 34.7 0.25
Hs21314762 34.3 0.31
7304232 33.1 0.71
CE08647 31.6 2.2
At1g08110 31.6 2.2
CE01624 29.6 8.0
CE18122 29.6 8.2
At1g67280 29.6 8.4
Hs22042827 29.6 8.8
> SPBC12C2.12c
Length=302
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 0/47 (0%)
Query 169 LHHIEIAATDLEDTLKFYEDVLGMTLIDKKTAAGFGFTLYFLALESP 215
L+H I DL+ +LKFY +V GM LID+ F+L FLA + P
Sbjct 12 LNHTMIRVKDLDKSLKFYTEVFGMKLIDQWVFEENEFSLSFLAFDGP 58
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query 147 VEPSHNSSTLRFDTLPLLRLPVLHHIEIAATDLEDTLKFYEDVLGMTLIDKKTAAGFGFT 206
+P N S RF+ H + D E ++ FYE LGM +IDK FT
Sbjct 156 TKPKANISNFRFN-----------HTMVRVKDPEPSIAFYEK-LGMKVIDKADHPNGKFT 203
Query 207 LYFLALES 214
YFLA S
Sbjct 204 NYFLAYPS 211
> Hs5729842
Length=184
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 0/50 (0%)
Query 168 VLHHIEIAATDLEDTLKFYEDVLGMTLIDKKTAAGFGFTLYFLALESPTN 217
+L + D + +L FY VLGMTLI K F+LYFLA E +
Sbjct 31 LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKND 80
> YML004c
Length=326
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 0/52 (0%)
Query 169 LHHIEIAATDLEDTLKFYEDVLGMTLIDKKTAAGFGFTLYFLALESPTNASL 220
+H I + +L+FY++VLGM L+ FTLYFL P S+
Sbjct 183 FNHTMIRIKNPTRSLEFYQNVLGMKLLRTSEHESAKFTLYFLGYGVPKTDSV 234
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 0/45 (0%)
Query 168 VLHHIEIAATDLEDTLKFYEDVLGMTLIDKKTAAGFGFTLYFLAL 212
+L+H + D T+KFY + GM L+ +K F+LYFL+
Sbjct 22 LLNHTCLRVKDPARTVKFYTEHFGMKLLSRKDFEEAKFSLYFLSF 66
> HsM14211939
Length=176
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query 136 LPAPTPEEVQAVEPSHNSSTLRFDTLPLLRLPVLHHIEIAATDLEDTLKFYEDVLGMTLI 195
L AP P V S S L T + L L+H+ IA DLE FY+++LG +
Sbjct 19 LQAPIP----TVRASSTSQPLDQVTGSVWNLGRLNHVAIAVPDLEKAAAFYKNILGAQVS 74
Query 196 DKKTAAGFGFTLYFLALESPTNASLH 221
+ G ++ F+ L + LH
Sbjct 75 EAVPLPEHGVSVVFVNLGNTKMELLH 100
> Hs21314762
Length=176
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query 136 LPAPTPEEVQAVEPSHNSSTLRFDTLPLLRLPVLHHIEIAATDLEDTLKFYEDVLGMTLI 195
L AP P V S S L T + L L+H+ IA DLE FY+++LG +
Sbjct 19 LQAPIP----TVRASSTSQPLDQVTGSVWNLGRLNHVAIAVPDLEKAAAFYKNILGAQVS 74
Query 196 DKKTAAGFGFTLYFLALESPTNASLH 221
+ G ++ F+ L + LH
Sbjct 75 EAVPLPEHGVSVVFVNLGNTKMELLH 100
> 7304232
Length=176
Score = 33.1 bits (74), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 0/41 (0%)
Query 178 DLEDTLKFYEDVLGMTLIDKKTAAGFGFTLYFLALESPTNA 218
D +L FY VLGMTL+ K F+LYFL E+ T+
Sbjct 37 DPRKSLPFYTGVLGMTLLVKLDFPEAKFSLYFLGYENATDV 77
> CE08647
Length=493
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 15/101 (14%)
Query 129 SSEREGCLPAPTPEE----VQAVEPSHNSSTLRFDTLPLLRL---PVLHHIEI------- 174
SS++ P TPEE V AVE S T + + P +++ P +
Sbjct 226 SSDKPATHPRITPEEKQYIVTAVEASMGKDTGKVPSTPWIKILTSPAVWACWAGHFAGDW 285
Query 175 -AATDLEDTLKFYEDVLGMTLIDKKTAAGFGFTLYFLALES 214
A T L F +DVLG+ L A + YFLA+ +
Sbjct 286 GAYTMLVSLPSFLKDVLGLNLSSLGAVASIPYIAYFLAINA 326
> At1g08110
Length=185
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 0/46 (0%)
Query 168 VLHHIEIAATDLEDTLKFYEDVLGMTLIDKKTAAGFGFTLYFLALE 213
++ D + +L FY VLGM+L+ + + F+LYFL E
Sbjct 27 IMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYE 72
> CE01624
Length=1941
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 7/108 (6%)
Query 31 QNFRGRLLQFMSEYKMASLKAHMNDESRTAS-SCSFDHLRQSPARAHDSGESKRFARGAV 89
Q F L + A LK ++E+R AS S D ++ RA DSG SK +
Sbjct 1835 QAFDAHLAVVAEQAGCADLKFSPDNENRKASQKTSADDPKRGRRRA-DSGSSKLNNSFSN 1893
Query 90 ETFGGLGGGTGERRRSPSPSAPS--RFCSMSVRESGTASLFSSEREGC 135
G+ GG ER RS + S R+ + E +L + EGC
Sbjct 1894 PKLNGMNGGRRERSRSADRAHKSVKRYDDVVCAED---ALEKANEEGC 1938
> CE18122
Length=1943
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 7/108 (6%)
Query 31 QNFRGRLLQFMSEYKMASLKAHMNDESRTAS-SCSFDHLRQSPARAHDSGESKRFARGAV 89
Q F L + A LK ++E+R AS S D ++ RA DSG SK +
Sbjct 1837 QAFDAHLAVVAEQAGCADLKFSPDNENRKASQKTSADDPKRGRRRA-DSGSSKLNNSFSN 1895
Query 90 ETFGGLGGGTGERRRSPSPSAPS--RFCSMSVRESGTASLFSSEREGC 135
G+ GG ER RS + S R+ + E +L + EGC
Sbjct 1896 PKLNGMNGGRRERSRSADRAHKSVKRYDDVVCAED---ALEKANEEGC 1940
> At1g67280
Length=350
Score = 29.6 bits (65), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 0/41 (0%)
Query 171 HIEIAATDLEDTLKFYEDVLGMTLIDKKTAAGFGFTLYFLA 211
H+ D++ T+KFY + LGM L+ K+ +T FL
Sbjct 91 HVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLG 131
> Hs22042827
Length=522
Score = 29.6 bits (65), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 0/36 (0%)
Query 208 YFLALESPTNASLHYWLWVQRFSSICIKVHTDGTQV 243
Y LA SP ++L YWLW ++ +++ T V
Sbjct 121 YLLAQTSPPESNLVYWLWEKQKVMAIVRIDTQNNPV 156
Lambda K H
0.319 0.134 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 6884499570
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40