bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_1239_orf1
Length=75
Score E
Sequences producing significant alignments: (Bits) Value
Hs4505651 47.8 5e-06
7298016 38.9 0.002
At2g38670 37.4 0.007
CE26830 35.4 0.028
At2g03030 27.3 6.7
At4g31040 26.9 9.1
> Hs4505651
Length=389
Score = 47.8 bits (112), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 0/65 (0%)
Query 10 DPYKVPKEMGIYREAESFSLWTTRELVSRVIQNRQTLSATIGNREKKETHFWESLSGQTA 69
DPY+ PK GI+R+ +S S TT +V R+I NR A +E KE F E+ Q A
Sbjct 320 DPYQEPKRRGIFRQIDSGSNLTTDLIVQRIITNRLEYEARNQKKEAKELAFLEAARQQAA 379
Query 70 RLIAE 74
+ + E
Sbjct 380 QPLGE 384
> 7298016
Length=363
Score = 38.9 bits (89), Expect = 0.002, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 0/58 (0%)
Query 10 DPYKVPKEMGIYREAESFSLWTTRELVSRVIQNRQTLSATIGNREKKETHFWESLSGQ 67
DPY VPK I+ +S + TT +V R+I +R +EKKE +E+L Q
Sbjct 299 DPYAVPKTRAIFELIDSGNEMTTERIVERIISHRLEYERRNQAKEKKEIEAFEALQRQ 356
> At2g38670
Length=421
Score = 37.4 bits (85), Expect = 0.007, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 0/59 (0%)
Query 7 QQEDPYKVPKEMGIYREAESFSLWTTRELVSRVIQNRQTLSATIGNREKKETHFWESLS 65
++++PY VP MGI++ +S TT ++ R++ N + +E E ++E S
Sbjct 358 EEDNPYSVPISMGIFQVLDSPLDITTSTIIRRIVANHEAYQKRNAKKEASEKKYYEQKS 416
> CE26830
Length=370
Score = 35.4 bits (80), Expect = 0.028, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 0/48 (0%)
Query 10 DPYKVPKEMGIYREAESFSLWTTRELVSRVIQNRQTLSATIGNREKKE 57
DP+ K GIY E +S S TT ++ R+I +R +EKKE
Sbjct 313 DPFAEAKRRGIYHEVDSGSDMTTDLIIDRIIHHRLEYETRNKKKEKKE 360
> At2g03030
Length=204
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query 14 VPKEMGIYREAESFSLWTTRELVSRVIQNRQTLSATIGNREKKETHF 60
+P +MG+ +S + + + V++ Q + ATIG E++E HF
Sbjct 139 IPNKMGLSLGDKS----SEADFIKEVVKAVQCVVATIGLEEEEENHF 181
> At4g31040
Length=293
Score = 26.9 bits (58), Expect = 9.1, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query 7 QQEDPYKVPKEMGIYREAESFSLW-TTRELVSRVIQNRQTLSATIGNREKKETHFWE 62
Q DP + Y+ +S SLW R+ + R + + + ++ GN K+ +W+
Sbjct 12 QNPDPESSSSSLLRYKPCDSISLWGKRRKKLWRFVPSAEKNNSHTGNNNKRRRSWWQ 68
Lambda K H
0.313 0.130 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1181410888
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40