bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_1202_orf2
Length=123
Score E
Sequences producing significant alignments: (Bits) Value
7292802 64.7 4e-11
Hs5454074 49.3 2e-06
At3g52250 44.3 6e-05
Hs5454138 43.1 1e-04
CE11040 32.3 0.24
At5g58900 30.8 0.70
At2g33610 30.4 0.77
Hs18600610 29.6 1.4
CE28536 29.3 1.9
CE28535 29.3 1.9
At1g80460 28.5 3.1
At5g40430 28.5 3.3
Hs20543026 28.1 3.7
YCR033w 28.1 3.8
7290363 28.1 4.6
Hs5032109 27.7 4.9
7292012 27.7 5.9
Hs17505907 27.3 6.3
Hs14149979 26.9 9.6
> 7292802
Length=3502
Score = 64.7 bits (156), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 0/66 (0%)
Query 40 ERECGYTCNSTRVFEPVEQEAERKAVTVWAEAEARTFVEKYLMYPKNFEKIAACLDGKTT 99
+R C Y + + + V +RKA+ +W E TF EKYL +PKNF IAA LD K+
Sbjct 982 QRRCAYHNENGLIEDMVAVHQQRKALNMWTAGEKETFKEKYLQHPKNFGAIAASLDRKSP 1041
Query 100 RDCVRF 105
+DCVR+
Sbjct 1042 QDCVRY 1047
> Hs5454074
Length=2517
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 35/52 (67%), Gaps = 0/52 (0%)
Query 54 EPVEQEAERKAVTVWAEAEARTFVEKYLMYPKNFEKIAACLDGKTTRDCVRF 105
+P++ +R+ + +W+E E TF EK++ +PKNF IA+ L+ KT +CV +
Sbjct 418 DPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLY 469
> At3g52250
Length=1677
Score = 44.3 bits (103), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 0/52 (0%)
Query 54 EPVEQEAERKAVTVWAEAEARTFVEKYLMYPKNFEKIAACLDGKTTRDCVRF 105
+P + E ER + W E F+ M+ K+F+KIA+ L KTT DC+ +
Sbjct 875 DPCDVEKERTMINPWTSEEKEIFLNLLAMHGKDFKKIASSLTQKTTADCIDY 926
Score = 28.1 bits (61), Expect = 3.7, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 25/49 (51%), Gaps = 0/49 (0%)
Query 68 WAEAEARTFVEKYLMYPKNFEKIAACLDGKTTRDCVRFCSRRVLCVVLD 116
W + E F++ + ++ KNF I+ + ++ C F S+ C+ L+
Sbjct 1111 WTDDERSAFIQGFSLFGKNFASISRYVGTRSPDQCKVFFSKVRKCLGLE 1159
> Hs5454138
Length=2440
Score = 43.1 bits (100), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 0/52 (0%)
Query 54 EPVEQEAERKAVTVWAEAEARTFVEKYLMYPKNFEKIAACLDGKTTRDCVRF 105
+P++ +R+ + VW + E F +K++ +PKNF IA+ L+ K+ DCV +
Sbjct 426 DPMKVYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERKSVPDCVLY 477
> CE11040
Length=950
Score = 32.3 bits (72), Expect = 0.24, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 0/39 (0%)
Query 67 VWAEAEARTFVEKYLMYPKNFEKIAACLDGKTTRDCVRF 105
+W E F + K+F+K+A L GK+ ++CV+F
Sbjct 614 LWTPDEIYQFQDAIYQSEKDFDKVAVELPGKSVKECVQF 652
> At5g58900
Length=288
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query 67 VWAEAEARTFVEKYLMY----PKNFEKIAACLDGKTTRDCVR 104
W AE + F +Y P ++K+AA + GKT D +R
Sbjct 33 TWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIR 74
> At2g33610
Length=432
Score = 30.4 bits (67), Expect = 0.77, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query 53 FEPVEQEAERKAVTVWAEAEARTFVEKYLMYPKNFEKIAACLDGKTTRDCV 103
F+ VE E K W++ E +E + Y +++K+A+ + G+T +DCV
Sbjct 215 FKRVEISEESKPE--WSDKEILLLLEAVMHYGDDWKKVASHVIGRTEKDCV 263
> Hs18600610
Length=512
Score = 29.6 bits (65), Expect = 1.4, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query 59 EAERKAVTVWAEAEARTFVEKYLMYPKNFEKIAAC-LDGKTTRDCVRF 105
+A R+ ++VW E E R F + Y K+F I A + ++ +CV F
Sbjct 279 KAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAF 326
> CE28536
Length=1782
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query 51 RVFEPVEQEAERKAVTVWAEAEARTFVEKYLMYPKNFEKIAACLDGKTTRDCVRFCSRR 109
R P AER V +W V YL P++ E IA ++ + DC+ C R
Sbjct 5 RSITPFSSFAERLTVNLWHAQRNVERVTLYLQEPRHVEDIAGSMEDEW--DCIEECVNR 61
> CE28535
Length=1776
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query 51 RVFEPVEQEAERKAVTVWAEAEARTFVEKYLMYPKNFEKIAACLDGKTTRDCVRFCSRR 109
R P AER V +W V YL P++ E IA ++ + DC+ C R
Sbjct 5 RSITPFSSFAERLTVNLWHAQRNVERVTLYLQEPRHVEDIAGSMEDEW--DCIEECVNR 61
> At1g80460
Length=522
Score = 28.5 bits (62), Expect = 3.1, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query 42 ECGYTCNSTRVFEPVEQEAERKA-VTVWAEAEARTF 76
E G +++VF P +E RK V W +A RTF
Sbjct 480 ESGEKAKNSKVFRPAMEEGIRKKKVASWCKAVERTF 515
> At5g40430
Length=431
Score = 28.5 bits (62), Expect = 3.3, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 0/35 (0%)
Query 68 WAEAEARTFVEKYLMYPKNFEKIAACLDGKTTRDC 102
W E+E E + PK + K+A +G+T + C
Sbjct 232 WTESEDIKLKEMVALEPKKWTKVAKHFEGRTPKQC 266
> Hs20543026
Length=621
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query 66 TVWAEAEARTFVEKYLMYPKN----FEKIAACLDGKTTRDCVR 104
T W E + + YP N +EKIA + G+T +DC++
Sbjct 552 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMK 594
> YCR033w
Length=1226
Score = 28.1 bits (61), Expect = 3.8, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query 68 WAEAEARTFVEKYLMYPKNFEKIAACLDG-KTTRDCV 103
+ + E F+E YL++PK F KI+ + G ++ +CV
Sbjct 673 FTDHEHSLFLEGYLIHPKKFGKISHYMGGLRSPEECV 709
> 7290363
Length=982
Score = 28.1 bits (61), Expect = 4.6, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 0/35 (0%)
Query 66 TVWAEAEARTFVEKYLMYPKNFEKIAACLDGKTTR 100
T W E F + + K+FE +A C++ K R
Sbjct 112 TTWTNVERNCFFDALNEFGKDFEAVANCINAKLKR 146
> Hs5032109
Length=622
Score = 27.7 bits (60), Expect = 4.9, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Query 7 SLRQRLQKQQQESGGVHPIELIQTDPDWAIFDWERECGYTCNSTRVFEPVEQEAERKAVT 66
SL K++ E G VHP+E D D R + NS+ + P+ A
Sbjct 382 SLDSSPAKERLEDGCVHPLEEAMLSCD---MDGSRHFPESRNSSHIKRPM------NAFM 432
Query 67 VWAEAEARTFVEKY 80
VWA+ E R ++ +
Sbjct 433 VWAKDERRKILQAF 446
> 7292012
Length=816
Score = 27.7 bits (60), Expect = 5.9, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 0/38 (0%)
Query 7 SLRQRLQKQQQESGGVHPIELIQTDPDWAIFDWERECG 44
SL L QQ GG+HP+ + T + + D R+ G
Sbjct 315 SLNLELLAQQAGGGGLHPVSTLPTITESKVVDVHRQNG 352
> Hs17505907
Length=851
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query 52 VFEPVEQEAERKAVTVWAEAEARTFVEKYLMYPKNFEKI 90
VFE +ER+ WA+ ++F++ Y YP+ + I
Sbjct 696 VFEDYVHSSERR--VSWAKKALQSFIQAYATYPRELKHI 732
> Hs14149979
Length=792
Score = 26.9 bits (58), Expect = 9.6, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 0/39 (0%)
Query 67 VWAEAEARTFVEKYLMYPKNFEKIAACLDGKTTRDCVRF 105
VW E R F + + + K+F I + KT CV +
Sbjct 610 VWTPIEKRLFKKAFYAHKKDFYLIHKMIQTKTVAQCVEY 648
Lambda K H
0.322 0.134 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1191192512
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40