bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_0993_orf2
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
At3g55800 47.4 7e-06
CE21023 33.5 0.11
At3g61030_2 31.6 0.34
At3g60950_2 31.6 0.34
Hs4503671 31.6 0.42
7298626 29.6 1.4
7296529 29.6 1.6
Hs22050964 28.5 3.5
At1g43670 28.1 3.7
At5g64380 26.9 9.1
7296494 26.9 9.3
> At3g55800
Length=393
Score = 47.4 bits (111), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query 11 PNDYNASPMGRQLVAAVLVIYGPRTTALLSAGG--STFDLQLDPEEGDPVVLRGPCSIQK 68
P D G VAA + IYGPRTT +L+ G T + L +EG ++ I +
Sbjct 199 PGDKLTGITGGDQVAAAMGIYGPRTTYVLAVKGFPGTHEFLL-LDEGKWQHVKETTEIAE 257
Query 69 EGAKIFSPANLRAAQDLPAYNRMVQRWMEKRFTL 102
K+FSP NLRA D Y++++ ++++++TL
Sbjct 258 --GKMFSPGNLRATFDNSEYSKLIDYYVKEKYTL 289
> CE21023
Length=341
Score = 33.5 bits (75), Expect = 0.11, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query 20 GRQLVAAVLVIYGPRTTALLSAGGSTFDLQLDPEEGDPVVLRGPCSIQKEGAKIFS 75
G+++VAA +YG T +LS G LDP G+ +L P KE I+S
Sbjct 161 GKEMVAAGYALYGSATMVVLSTGDGVNGFTLDPSIGE-FILTHPNMKCKEKGSIYS 215
> At3g61030_2
Length=303
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 0/40 (0%)
Query 50 LDPEEGDPVVLRGPCSIQKEGAKIFSPANLRAAQDLPAYN 89
LD E+ PVVL G + E IF+PA ++ LP ++
Sbjct 249 LDLEKSKPVVLTGDLNCAHEEIDIFNPAVTNSSSSLPCFS 288
> At3g60950_2
Length=303
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 0/40 (0%)
Query 50 LDPEEGDPVVLRGPCSIQKEGAKIFSPANLRAAQDLPAYN 89
LD E+ PVVL G + E IF+PA ++ LP ++
Sbjct 249 LDLEKSKPVVLTGDLNCAHEEIDIFNPAVTNSSSSLPCFS 288
> Hs4503671
Length=339
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 0/51 (0%)
Query 11 PNDYNASPMGRQLVAAVLVIYGPRTTALLSAGGSTFDLQLDPEEGDPVVLR 61
P++ +A GR +VAA +YG T LS G LDP G+ V++
Sbjct 148 PSEKDALQCGRNIVAAGYALYGSATLVALSTGQGVDLFMLDPALGEFVLVE 198
> 7298626
Length=334
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query 20 GRQLVAAVLVIYGPRTTALLSAGGSTFDLQLDPEEGDPVVLRGPCSIQKEGAKIFS 75
G QLVAA +YG T +L G DP G+ VL P E KI+S
Sbjct 159 GNQLVAAGYALYGSATAIVLGLGSGVNGFTYDPAIGE-FVLTDPNMRVPEKGKIYS 213
> 7296529
Length=1429
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query 21 RQLVAAVLVIYGP--RTTALLSAGGSTFDLQLDPEEGDPVVLRG----PCSIQKEGAKIF 74
RQ A L+++ P R ALL+A GS QLD E +L+ S++++ A++F
Sbjct 64 RQYGANQLIVWKPDSRQLALLTASGSLLLYQLDFEANGMGILQQIDPPAASLKRDSAELF 123
Query 75 SPANL 79
N+
Sbjct 124 IKENI 128
> Hs22050964
Length=1346
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query 35 TTALLSAGGSTFDLQLDPEEGDPVVLRGPCSIQKEGAKIFSPANLRAAQDLPAYNRMVQR 94
T LLS G STF L++ E G +++ PCS + + + L ++ LP Y+ V
Sbjct 100 TVTLLSCGCSTFILRIRTEHG---IIKKPCSRPPDCQTL---SILCSSHHLPGYSWNVVE 153
Query 95 WME 97
M+
Sbjct 154 VMD 156
> At1g43670
Length=341
Score = 28.1 bits (61), Expect = 3.7, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 0/51 (0%)
Query 20 GRQLVAAVLVIYGPRTTALLSAGGSTFDLQLDPEEGDPVVLRGPCSIQKEG 70
G ++VAA +YG +LS G LDP G+ ++ I +G
Sbjct 159 GNEMVAAGYCMYGSSCMLVLSTGTGVHGFTLDPSLGEFILTHPDIKIPNKG 209
> At5g64380
Length=404
Score = 26.9 bits (58), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query 13 DYNASPMGRQLVAAVLVIYGPRTTALLSAGGSTFDLQLDPEEGDPVVLRGPCSIQKEGAK 72
+ N+ G +LVA+ V+Y T ++ G T LD G+ V+ I G +
Sbjct 215 ELNSLQRGSRLVASGYVLYSSATIFCVTLGSGTHAFTLDHSTGEFVLTHQNIKIPTRG-Q 273
Query 73 IFSPANLR 80
I+S + R
Sbjct 274 IYSVNDAR 281
> 7296494
Length=274
Score = 26.9 bits (58), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 10/56 (17%)
Query 42 GGSTFDLQLD----------PEEGDPVVLRGPCSIQKEGAKIFSPANLRAAQDLPA 87
G+ DL+L PEE DP+V + +E A+ F P +L A +D A
Sbjct 96 AGTVADLELSIRTPANTYGAPEEQDPLVPDTVVVVAQEPARDFQPPSLDAVEDFAA 151
Lambda K H
0.319 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1181107380
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40