bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_0927_orf1
Length=223
Score E
Sequences producing significant alignments: (Bits) Value
CE05478 38.9 0.009
7299013 36.2 0.053
ECU04g1190 30.0 4.3
7299530 29.3 5.9
Hs5453870 29.3 7.4
Hs4557463 29.3 7.4
Hs19923531 28.9 9.6
> CE05478
Length=416
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 21/225 (9%)
Query 4 RYLTDPEILTSEILFLILTLSNIFVVYRLFLDV-VPFPVFVTWWQLAQGLLMAWCLGEVG 62
++ + +++T+ + + ++ +F+ L V + P+F+TW+Q + + L +
Sbjct 76 KWESYKQVITAVSAYWVFSIGLVFLNKYLLSSVQLDAPLFITWYQCLVTVFLCLFLSKTS 135
Query 63 KEYPKLAYFPRVEINKRLLRRLFVPTIVNALMLVLANVLL--------YRGQCIATLPVV 114
K Y L FP + I+ ++ R + ++V M+ N+ L Y G+ + T+ V
Sbjct 136 KAYG-LFKFPSMPIDAKISREVLPLSVVFVAMISFNNLCLKYVGVSFYYVGRSLTTVFNV 194
Query 115 VAFAVVLHHITRFMGCGEEYMPMRWQAVGLLFTAFLLGITDSKTVGSDVLPWAL--LYAI 172
V ++L T G L+ FLLG+ G+ + + A
Sbjct 195 VCTYLILGQKTSGQAIG---------CCALIIFGFLLGVDQEGVTGTLSYTGVIFGVLAS 245
Query 173 FSAAFRAAFLQKVMHEVEGKGNLLHNHQHLISVVILPVLMIICGE 217
S A A + +KV+ V L + +L ++V+ LM+ GE
Sbjct 246 LSVALNAIYTRKVLSSVGDCLWRLTMYNNLNALVLFLPLMLFNGE 290
> 7299013
Length=337
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 88/194 (45%), Gaps = 30/194 (15%)
Query 40 PVFVTWWQLAQGLLMAWCLGEVGKEYPKLAYFPRVE-INKRLLRRLFVPTIVNALMLVLA 98
P+F++W+Q ++ + + ++YP + FP ++ R++ +++ LM+
Sbjct 50 PLFMSWFQCVVSTVICFVASRLSRKYPSVFTFPEGNPLDIDTFRKILPLSVLYTLMIGAN 109
Query 99 NVLL--------YRGQCIATLPVVVAFAVVLHHITRF---MGCGEEYMPMRWQAVGLLFT 147
N+ L Y G+ + T+ VV V+L T F + CG +
Sbjct 110 NLSLSYVTVAFYYIGRSLTTVFSVVLTYVILRQRTSFKCLLCCGA------------IVV 157
Query 148 AFLLGITDSKTVGSDVLPW-ALLYAIFSAAFRAAF---LQKVMHEVEGKGNLLHNHQHLI 203
F LG+ D +++ ++V W ++ + S+ A F +K + V + LL + +L
Sbjct 158 GFWLGV-DQESL-TEVFSWRGTIFGVLSSLALAMFSIQTKKSLGYVNQEVWLLSYYNNLY 215
Query 204 SVVILPVLMIICGE 217
S ++ L+II GE
Sbjct 216 STLLFLPLIIINGE 229
> ECU04g1190
Length=403
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query 118 AVVLHHITRFMGCGEEYMPMRWQAVGLLFTAFLLGITDSKTVGSDVLPWALLYAIFSAAF 177
+ V+ +T MG G YMP +++VG + L+ I VL + LYAI AA
Sbjct 9 SAVVTMVTSMMGTGINYMPYAFKSVGYVRGILLINIV-------GVLTFFSLYAISIAAN 61
Query 178 RA 179
++
Sbjct 62 KS 63
> 7299530
Length=1346
Score = 29.3 bits (64), Expect = 5.9, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 0/33 (0%)
Query 63 KEYPKLAYFPRVEINKRLLRRLFVPTIVNALML 95
KEY K++ +V +NK+L R LF +N LM+
Sbjct 930 KEYFKISRNGKVSVNKQLDRNLFAVMRINVLMV 962
> Hs5453870
Length=1089
Score = 29.3 bits (64), Expect = 7.4, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query 95 LVLANVLLYRGQCIATLPVVVAFAVVLHHITRFMGCGEEYMPMRWQAVGLLFTAFLLGIT 154
L NVLL +G+ + +A ++ H + ++ G ++P++W A +F ++
Sbjct 819 LAARNVLLAQGKIVKICDFGLARDIM--HDSNYVSKGSTFLPVKWMAPESIFDNLYTTLS 876
Query 155 DSKTVGSDVLPWALLYAIFS 174
D + G LL+ IFS
Sbjct 877 DVWSYG------ILLWEIFS 890
> Hs4557463
Length=493
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 8/51 (15%)
Query 98 ANVLLYRGQCIATLPVVVAFAVVLHHITRFMGCGEEYMPMRWQAVGLLFTA 148
ANVL+Y G + LP + +V +T Y P WQ L+F +
Sbjct 126 ANVLVYEGGSVTWLPPAIYRSVCAVEVT--------YFPFDWQNCSLIFRS 168
> Hs19923531
Length=351
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 23/165 (13%)
Query 40 PVFVTWWQLAQGLLMAWCLGEVGKEYPKLAYFPRVEINKRLLRRLFVPTIV-------NA 92
P+FVT++Q L+ L + P FP + ++ R+ R + ++V N
Sbjct 60 PIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNN 119
Query 93 LMLVLANVLLYR-GQCIATLPVVVAFAVVLHHITRFMGCGEEYMPMRWQAVGLLFTAFLL 151
L L V Y G+ + T+ V+ ++L T F G++ F L
Sbjct 120 LCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYAL---------LTCGIIIGGFWL 170
Query 152 GITDSKTVGSDVLPW-ALLYAIFSA---AFRAAFLQKVMHEVEGK 192
G+ G+ L W ++ + ++ + A + KV+ V+G
Sbjct 171 GVDQEGAEGT--LSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGS 213
Lambda K H
0.331 0.144 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 4255059914
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40