bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eace_0336_orf2 Length=153 Score E Sequences producing significant alignments: (Bits) Value SPAC2F7.14c 95.5 3e-20 Hs19923403 92.0 4e-19 CE27533 90.5 1e-18 At1g03360 85.1 5e-17 7291605 84.0 1e-16 YHR069c 80.5 1e-15 ECU10g1340 63.5 1e-10 > SPAC2F7.14c Length=329 Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 0/88 (0%) Query 10 VQRRRDDADVLIMRSMFQSADLLCCEVQKAQNDGTILLHTRSARYGRLQNGIGLRVSPQL 69 +QRR+ + D L MRS FQ DLL EVQ+ +DG++ +HTRS +YG+L+NG+ L+V P L Sbjct 150 IQRRKLETDELQMRSFFQEGDLLVAEVQQYFSDGSVSIHTRSLKYGKLRNGVFLKVPPAL 209 Query 70 IKRQSKHIGHLQCGLQLILGVNGFLWIS 97 + R H L G+ +IL VNG++W+S Sbjct 210 VVRSKSHAYALAGGVDIILSVNGYVWVS 237 > Hs19923403 Length=293 Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 43/85 (50%), Positives = 54/85 (63%), Gaps = 0/85 (0%) Query 12 RRRDDADVLIMRSMFQSADLLCCEVQKAQNDGTILLHTRSARYGRLQNGIGLRVSPQLIK 71 RRR D L MR Q DL+ EVQ +DG + LHTRS +YG+L G+ ++VSP L+K Sbjct 121 RRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVK 180 Query 72 RQSKHIGHLQCGLQLILGVNGFLWI 96 RQ H L CG +ILG NGF+WI Sbjct 181 RQKTHFHDLPCGASVILGNNGFIWI 205 > CE27533 Length=303 Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 2/101 (1%) Query 12 RRRDDADVLIMRSMFQSADLLCCEVQKAQNDGTILLHTRSARYGRLQNGIGLRVSPQLIK 71 RR+D D M ++ +L+C EVQ+ Q+DGT++LHTR+ +YG+LQ GI ++V P LIK Sbjct 127 RRKDVEDEEKMSEFLKNGELICAEVQQVQHDGTLMLHTRNNKYGKLQQGILIKVPPHLIK 186 Query 72 RQSKHIGHLQCGLQLILGVNGFLWI--SVPGGAAGGSGDGV 110 + KH L G+ +I+G NG +W+ S+P G V Sbjct 187 KSKKHFHTLPYGMAVIIGCNGSVWVTPSLPETTLEEDGSHV 227 > At1g03360 Length=322 Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 1/88 (1%) Query 10 VQRRRDDADVLIMRSMFQSADLLCCEVQKAQNDGTILLHTRSARYGRLQNGIGLRVSPQL 69 +QRRR D L MR++F D++C EV+ Q+DG++ L RS +YG+L+ G L+V P L Sbjct 132 IQRRRTSVDELNMRNIFVEHDVVCAEVRNFQHDGSLQLQARSQKYGKLEKGQLLKVDPYL 191 Query 70 IKRQSKHIGHLQC-GLQLILGVNGFLWI 96 +KR H +++ G+ LI+G NGF+W+ Sbjct 192 VKRSKHHFHYVESLGIDLIIGCNGFIWV 219 > 7291605 Length=298 Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 0/90 (0%) Query 12 RRRDDADVLIMRSMFQSADLLCCEVQKAQNDGTILLHTRSARYGRLQNGIGLRVSPQLIK 71 RRR D +MR DL+ EVQ +G++ L+TRS +YG+L GI ++V P L+K Sbjct 124 RRRSAEDEQMMRRYLDEGDLISAEVQNIFEEGSLSLYTRSLKYGKLSQGILVKVFPALVK 183 Query 72 RQSKHIGHLQCGLQLILGVNGFLWISVPGG 101 R+ H +L CG +ILG NG++WIS G Sbjct 184 RRKMHFHNLPCGASVILGNNGYIWISPTKG 213 > YHR069c Length=359 Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 0/87 (0%) Query 10 VQRRRDDADVLIMRSMFQSADLLCCEVQKAQNDGTILLHTRSARYGRLQNGIGLRVSPQL 69 + RR+ ++D L MRS + DLL EVQ DG+ LHTRS +YG+L+NG+ +V L Sbjct 147 ILRRKSESDELQMRSFLKEGDLLNAEVQSLFQDGSASLHTRSLKYGKLRNGMFCQVPSSL 206 Query 70 IKRQSKHIGHLQCGLQLILGVNGFLWI 96 I R H +L + ++LGVNG++W+ Sbjct 207 IVRAKNHTHNLPGNITVVLGVNGYIWL 233 > ECU10g1340 Length=223 Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 3/98 (3%) Query 1 LSVAAVCL--DVQRRRDDADVLIMRSMFQSADLLCCEVQKAQNDGTILLHTRSARYGRLQ 58 L ++A+ L VQRR+ ++D + MR F+ DL+ EVQK +G LHTRS +YG+L Sbjct 87 LGLSAINLPGTVQRRKQESDEISMRDFFEIDDLVVSEVQKVGRNGVAALHTRSDKYGKLG 146 Query 59 NGIGLRVSPQLIKRQSKHIGHLQCGLQLILGVNGFLWI 96 G+ L P + K +++I+G NG++W+ Sbjct 147 PGL-LVFVPHFLLEPLKTRFLSNGSVEVIVGCNGYIWV 183 Lambda K H 0.322 0.135 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1961355924 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40