bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_0249_orf2
Length=93
Score E
Sequences producing significant alignments: (Bits) Value
At5g19350 32.0 0.25
CE18218 32.0 0.29
At3g12640 31.6 0.36
Hs13376770 31.2 0.45
YFR023w 31.2 0.45
At2g36660 30.4 0.72
ECU03g0730 30.4 0.89
7293214 30.0 1.1
Hs13569958 29.3 1.8
CE08553 28.9 2.1
Hs14141159 28.9 2.6
Hs14141157 28.9 2.6
CE25105 28.1 4.4
At1g71770 27.3 7.5
SPBC3B9.11c 26.9 8.8
Hs4758262 26.9 9.1
Hs22057724 26.9 9.5
> At5g19350
Length=425
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query 1 TKMAAPNAFYTMRPVIPQTRSDTSSRVTIKNIPLGVTEAQLKANLSKLGDIRVHMFVPAT 60
+ +AAP Y V P T + +++ N+ VTE +LK S+LG++ +++ +PAT
Sbjct 217 SAVAAPVQAY----VAPPESDVTCTTISVANLDQNVTEEELKKAFSQLGEV-IYVKIPAT 271
Query 61 EYGLGWAWVTCEKHEDVEKML 81
+ G+ +V + E+ +
Sbjct 272 K---GYGYVQFKTRPSAEEAV 289
> CE18218
Length=1402
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query 14 PVIPQTRSDTSSRVTIKNIPLGVTEAQLKANLSKLGDIRVHMFVPATEYGLGWAWV 69
P I ++ SR++ K+IP GV EA L S+ D V +F+P GWA +
Sbjct 724 PSINESLKTAMSRISEKDIPFGVIEAILNDIASRGVDGAVLVFLP------GWAEI 773
> At3g12640
Length=674
Score = 31.6 bits (70), Expect = 0.36, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query 1 TKMAAPNAFYTMRPVIPQTRSDTSSR-VTIKNIPLGVTEAQLKANLSKLGDIRVHMFV-- 57
T + P T RP+ D SSR + + N+ G T+ L + +K G++ V
Sbjct 496 TNKSVPGTLSTTRPL-----EDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFIVTD 550
Query 58 PATEYGLGWAWVTCEKHEDVEKMLA 82
PAT G A++ + E E L+
Sbjct 551 PATGQPSGSAYIEFTRKEAAENALS 575
> Hs13376770
Length=344
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query 23 TSSRVTIKNIPLGVTEAQLKANLSKLGDIRVHMFVPATEYGLGWA-WVTCEKHEDV 77
T S++ +K++PLG EA+L+A DI M+ P T W W+ ++DV
Sbjct 189 TRSKMPLKDVPLGQLEAELQA-----PDITPDMYDPNTADDEDWKMWLGGLMNDDV 239
> YFR023w
Length=611
Score = 31.2 bits (69), Expect = 0.45, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 0/61 (0%)
Query 21 SDTSSRVTIKNIPLGVTEAQLKANLSKLGDIRVHMFVPATEYGLGWAWVTCEKHEDVEKM 80
S + + + IKN+P T + S++G I+ AT+ WA+VT + D EK
Sbjct 299 SSSQNSIFIKNLPTITTRDDILNFFSEVGPIKSIYLSNATKVKYLWAFVTYKNSSDSEKA 358
Query 81 L 81
+
Sbjct 359 I 359
> At2g36660
Length=609
Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query 17 PQTRSDTSSRVTIKNIPLGVTEAQLKANLSKLGDIRVHMFVPATEYG--LGWAWVTCEKH 74
P R + V +KN+P VT A L+ K G+I V V E G G+ +V E+
Sbjct 104 PDARRNGVGNVFVKNLPESVTNAVLQDMFKKFGNI-VSCKVATLEDGKSRGYGFVQFEQE 162
Query 75 E 75
+
Sbjct 163 D 163
> ECU03g0730
Length=293
Score = 30.4 bits (67), Expect = 0.89, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query 20 RSDTSSRVTIKNIPLGVTEAQLKANLSKLGDIRVHMFVPAT---EYGLGWAWVTCEKHED 76
R + S V IK I +TE LK+ + K+G + + +P T + G+ +V K ED
Sbjct 82 RENPSLTVFIKGISYDLTEYDLKSEMEKIGKV-ARVGIPMTNDHKRNKGFGYVEFCKEED 140
Query 77 VEKML 81
V+K L
Sbjct 141 VKKAL 145
> 7293214
Length=416
Score = 30.0 bits (66), Expect = 1.1, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 0/36 (0%)
Query 6 PNAFYTMRPVIPQTRSDTSSRVTIKNIPLGVTEAQL 41
P+ T PV+ T + + R+ + NIP GVTE ++
Sbjct 74 PDTPQTAVPVVGSTITRQARRLYVGNIPFGVTEEEM 109
> Hs13569958
Length=631
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query 27 VTIKNIPLGVTEAQLKANLSKLGD-IRVHMFVPATEYGLGWAWVTCEKHEDVEK 79
V IKN + + +LK K G + V + + G+ +V+ E+HED +K
Sbjct 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
> CE08553
Length=461
Score = 28.9 bits (63), Expect = 2.1, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query 5 APN----AFYTMRPVIPQTRSDTSSRVTIKNIPLGVTEAQLKANLSKLGDIR--VHMFVP 58
+PN +F +R P ++ +++I L V A+ K ++KL +IR +++FV
Sbjct 143 SPNMDAVSFPILRLPQPALKNALRQMFLVEHISLSVLSAKAKQQVAKLNEIRGNIYLFVS 202
Query 59 ATEYG--LGWAWVTCEKHEDVEKMLAYAAEKREKEA 92
++ G L W+ + D++K E R+ EA
Sbjct 203 SSMVGFNLRSKWIHFDLSVDLDKS---TIEIRKHEA 235
> Hs14141159
Length=331
Score = 28.9 bits (63), Expect = 2.6, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query 27 VTIKNIPLGVTEAQLKANLSKLGDIRVHMFVPATEYGLGWAWVTCEKHEDVEKMLAYAAE 86
V ++ +P TE + S L IRVH+ + A G A V HED A AA
Sbjct 182 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGADGRATGEADVEFVTHED-----AVAAM 236
Query 87 KREK 90
++K
Sbjct 237 SKDK 240
> Hs14141157
Length=346
Score = 28.9 bits (63), Expect = 2.6, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query 27 VTIKNIPLGVTEAQLKANLSKLGDIRVHMFVPATEYGLGWAWVTCEKHEDVEKMLAYAAE 86
V ++ +P TE + S L IRVH+ + A G A V HED A AA
Sbjct 197 VHMRGLPFRATENDIANFFSPLNPIRVHIDIGADGRATGEADVEFVTHED-----AVAAM 251
Query 87 KREK 90
++K
Sbjct 252 SKDK 255
> CE25105
Length=415
Score = 28.1 bits (61), Expect = 4.4, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query 17 PQTRS--DTSSRVTIKNIPLGVTEAQLKANLSKLGDIRVHMFVPATEYGLGWAWVTCEKH 74
P T S D R+ + NIP + LK K G + + G+ +VT E+
Sbjct 143 PSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERP 202
Query 75 EDVEK 79
+D E+
Sbjct 203 QDAER 207
> At1g71770
Length=668
Score = 27.3 bits (59), Expect = 7.5, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 0/27 (0%)
Query 25 SRVTIKNIPLGVTEAQLKANLSKLGDI 51
+ V +KN+P +T+ +LK K GDI
Sbjct 225 TNVYVKNLPKEITDDELKKTFGKYGDI 251
> SPBC3B9.11c
Length=363
Score = 26.9 bits (58), Expect = 8.8, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 0/46 (0%)
Query 27 VTIKNIPLGVTEAQLKANLSKLGDIRVHMFVPATEYGLGWAWVTCE 72
V + NIP V+E Q+ +++G ++ V E G G + CE
Sbjct 9 VFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCE 54
> Hs4758262
Length=359
Score = 26.9 bits (58), Expect = 9.1, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query 14 PVIPQTRSDTSSRVTIKNIPLGVTEAQLKANLSKLGDIRVHMFV--PATEYGLGWAWVTC 71
PV D+ + + + +P +T+ +LK+ +G+I V T LG+ +V
Sbjct 28 PVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNY 87
Query 72 EKHEDVEKML 81
+D EK +
Sbjct 88 IDPKDAEKAI 97
> Hs22057724
Length=155
Score = 26.9 bits (58), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query 15 VIPQTRSDTSSRVTIKNIPLGVTEAQLKANLSKLGDIRVHMFVPATEYGLGWAWVTCEKH 74
V P T S +S T K+ PLG T A+ + S + P+T + G V C
Sbjct 20 VSPHTNSTSSYESTPKSYPLG-TAAKAASGQSPSTTSPLPETAPSTLHERGLENVVCSD- 77
Query 75 EDVEKMLAYAAEKREK 90
+D+ + Y+A ++ K
Sbjct 78 KDLRQATGYSAAEKSK 93
Lambda K H
0.316 0.128 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1167934574
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40