bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eace_0215_orf1 Length=91 Score E Sequences producing significant alignments: (Bits) Value SPCC188.11 62.8 1e-10 CE06519 61.6 4e-10 Hs6912676 59.3 1e-09 At1g77180 59.3 2e-09 7291006 57.0 9e-09 Hs20475567_2 48.9 2e-06 CE24876 31.6 0.36 7301317 29.3 1.7 7300499_1 28.5 2.8 CE00460 28.5 3.5 > SPCC188.11 Length=557 Score = 62.8 bits (151), Expect = 1e-10, Method: Composition-based stats. Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 0/53 (0%) Query 38 IPPYLHRQGFVPKCEEDFGGGGSYPEIFVAQFPLGMGKNMDGGLSSSTLSLQV 90 IPPY R+G+ P EDFG GG++PEI VAQ+PL MG+ + +TL+LQV Sbjct 43 IPPYGQRKGWFPSSPEDFGDGGAFPEIHVAQYPLDMGRKRSAKSAGNTLALQV 95 > CE06519 Length=535 Score = 61.6 bits (148), Expect = 4e-10, Method: Composition-based stats. Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 39 PPYLHRQGFVPKCEEDFGGGGSYPEIFVAQFPLGMGKNMDGGLSSSTLSLQVG 91 PPY R F P+ EDFG GG++PEI VAQFPLG+G G +TL+LQ G Sbjct 45 PPYGKRTSFRPRGPEDFGDGGAFPEIHVAQFPLGLGLGDMRGKPENTLALQYG 97 > Hs6912676 Length=536 Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 3/64 (4%) Query 27 KSTSNNKSSISIPPYLHRQGFVPKCEEDFGGGGSYPEIFVAQFPLGMGKNMDGGLSSSTL 86 + TS S PPY +R+G++P+ EDFG GG++PEI VAQ+PL MG+ S+ L Sbjct 30 RQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEIHVAQYPLDMGRKKK---MSNAL 86 Query 87 SLQV 90 ++QV Sbjct 87 AIQV 90 > At1g77180 Length=613 Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 3/70 (4%) Query 24 RPLKSTSNNKSSIS---IPPYLHRQGFVPKCEEDFGGGGSYPEIFVAQFPLGMGKNMDGG 80 R +S + SSI +P YL+RQG PK EDFG GG++PEI + Q+PL MGKN Sbjct 29 RVTESETVKSSSIKFKVVPAYLNRQGLRPKNPEDFGDGGAFPEIHLPQYPLLMGKNKSNK 88 Query 81 LSSSTLSLQV 90 + TL + V Sbjct 89 PGAKTLPVTV 98 > 7291006 Length=360 Score = 57.0 bits (136), Expect = 9e-09, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 0/57 (0%) Query 34 SSISIPPYLHRQGFVPKCEEDFGGGGSYPEIFVAQFPLGMGKNMDGGLSSSTLSLQV 90 + I+ PPY R+ +VP + DFG GG++PEI VAQ+PLG+G + G S L++++ Sbjct 37 AKIAAPPYGQRKDWVPHTDADFGDGGAFPEIHVAQYPLGLGAPGNVGKKSDALAVRL 93 > Hs20475567_2 Length=320 Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 3/48 (6%) Query 43 HRQGFVPKCEEDFGGGGSYPEIFVAQFPLGMGKNMDGGLSSSTLSLQV 90 +R+G+ + EDFG GG++PEI VAQ+PL MG+ SS L++QV Sbjct 3 YRKGWTLRLLEDFGDGGAFPEIHVAQYPLDMGRKKK---ISSALAIQV 47 > CE24876 Length=562 Score = 31.6 bits (70), Expect = 0.36, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 0/45 (0%) Query 1 PRASRLCVSDASLGSYSLSTAPIRPLKSTSNNKSSISIPPYLHRQ 45 P +R+ +D G Y LS P+R T S+ PP+ H Q Sbjct 133 PYHNRIHAADVLHGCYYLSAHPVRSTFLTPKTPDSVLTPPHPHHQ 177 > 7301317 Length=842 Score = 29.3 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 4/41 (9%) Query 33 KSSISIPPYLHRQGFVPKCEEDFGGGGS----YPEIFVAQF 69 +S++SI P+L R+G + K EE+ G GS PE A+F Sbjct 403 RSALSIFPFLLRRGDLRKKEENTMGTGSKNYQAPEWLTAEF 443 > 7300499_1 Length=1558 Score = 28.5 bits (62), Expect = 2.8, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Query 15 SYSLSTAPIRPLKSTSNNKSSISIPPYLHRQGFVPKCEEDFG 56 S SL+ AP P K + K+ ++ PP R P E+D G Sbjct 655 SQSLAKAPKTPCKESKETKADMANPP--RRSSISPVVEDDSG 694 > CE00460 Length=632 Score = 28.5 bits (62), Expect = 3.5, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 5/40 (12%) Query 16 YSLSTA--PIRPLKSTSNNKSSISIPPYLHRQGFVPKCEE 53 YS TA P PLK + S + +P Y+H VP C++ Sbjct 346 YSEETAKIPNNPLKGSV---SDVKLPEYVHEIKMVPHCDD 382 Lambda K H 0.314 0.133 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1174483934 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40