bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eace_0180_orf1 Length=183 Score E Sequences producing significant alignments: (Bits) Value Hs20550209 30.8 1.5 CE01398 30.4 2.3 7301757 29.3 5.0 7298142 28.9 5.7 Hs18544848 28.9 5.9 YCR034w 28.9 6.5 SPAC2F7.03c 28.1 9.4 > Hs20550209 Length=520 Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust. Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 10/130 (7%) Query 58 ALSMAILGGLLYYYSKKPTHLSITLALGMSLAILFMSGFIWFSILLSTHLQLWLADIV-- 115 ++ +LG LY K +L++ + + S+ H L +IV Sbjct 180 CITFELLGINLYELMKNNNFQGFSLSIVRRFTLSVLKCLQMLSVEKIIHCDLKPENIVLY 239 Query 116 TQLEFILYVLDFGASCLALFQLQYVFDSPTYRGPRSFL--------PRWAESAARAEGWK 167 + + + V+DFG+SC ++ S YR P L W+ AE + Sbjct 240 QKGQASVKVIDFGSSCYEHQKVYTYIQSRFYRSPEVILGHPYDVAIDMWSLGCITAELYT 299 Query 168 GWSPFQGEGQ 177 G+ F GE + Sbjct 300 GYPLFPGENE 309 > CE01398 Length=994 Score = 30.4 bits (67), Expect = 2.3, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query 43 FLSLIAHFFVQDVGGALSMAILGGLLYYYSKKPTHL-SITLALGMSLAILFMSG 95 FL+ F + S+ ++G ++ Y +KKP + ++TL LG+ + + F SG Sbjct 448 FLAFHGKFTTVKDDPSASLELIGDIIVYLNKKPEQIFNLTLILGLVIIVGFASG 501 > 7301757 Length=1346 Score = 29.3 bits (64), Expect = 5.0, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 13/103 (12%) Query 26 DEFEKSKPRV----LSIAGYCFLSL-IAHFFVQDVGGALSMAILGGLLYYYSKKPTHLS- 79 DE ++S P V L G F+ + +A + + +L LGGL+ Y++ T +S Sbjct 40 DELKRSNPSVVRMILRAYGKIFVPMGLAFSISETICKSLMPLFLGGLVGYFATNQTDISE 99 Query 80 -------ITLALGMSLAILFMSGFIWFSILLSTHLQLWLADIV 115 + + + M + ++ FI++ + T L+L L+ ++ Sbjct 100 NTAYLYAMGIVICMLVPVITFHPFIFYIFQVGTKLRLALSGLI 142 > 7298142 Length=722 Score = 28.9 bits (63), Expect = 5.7, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 8/62 (12%) Query 124 VLDFGASCLALFQLQYVFDSPTYRGPRSFL--------PRWAESAARAEGWKGWSPFQGE 175 V+DFG+SC ++ S YR P L W+ AE + G+ F GE Sbjct 342 VIDFGSSCYVDRKIYTYIQSRFYRSPEVILGLQYGTAIDMWSLGCILAELYTGFPLFPGE 401 Query 176 GQ 177 + Sbjct 402 NE 403 > Hs18544848 Length=440 Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust. Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%) Query 150 RSFLPRWAESAARAEGW-KGWSPFQGEGQRLGG 181 R LP W S R EGW +GW + E + G Sbjct 333 REMLPFWMNSTGRREGWQRGWHGYDNELMDMRG 365 > YCR034w Length=347 Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust. Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 6/59 (10%) Query 78 LSITLALGMSLAILFMSGFIWFSILLSTHLQLWLADIVTQLEFILYVLDFGASCLALFQ 136 + I+L LG+ + + W+ L + +++W + VT+ + I +VLD G A++Q Sbjct 202 VPISLNLGVHVVMY------WYYFLAARGIRVWWKEWVTRFQIIQFVLDIGFIYFAVYQ 254 > SPAC2F7.03c Length=1087 Score = 28.1 bits (61), Expect = 9.4, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 56/148 (37%), Gaps = 11/148 (7%) Query 41 YCFLSLIAHFFVQDVGGALSMAILGGLLYYYSKKPTHLSITLALGMSLAILFMSGFIWFS 100 YC + HF+ +D ++ +LG LY K + + + S+ + + Sbjct 759 YCMVQYTDHFYFRD-HLCVATELLGKNLYELIKSNGFKGLPIVVIKSITRQLIQCLTLLN 817 Query 101 ILLSTHLQLWLADIVTQLEFI--LYVLDFGASCLALFQLQYVFDSPTYRGPRSFLPR--- 155 H L +I+ F + V+DFG+SC + S YR P L Sbjct 818 EKHVIHCDLKPENILLCHPFKSQVKVIDFGSSCFEGECVYTYIQSRFYRSPEVILGMGYG 877 Query 156 -----WAESAARAEGWKGWSPFQGEGQR 178 W+ AE + G+ F GE ++ Sbjct 878 TPIDVWSLGCIIAEMYTGFPLFPGENEQ 905 Lambda K H 0.326 0.142 0.461 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2914594326 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40