bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_3401_orf1 Length=153 Score E Sequences producing significant alignments: (Bits) Value 5833.PFE1445c 168 5e-41 > 5833.PFE1445c Length=719 Score = 168 bits (425), Expect = 5e-41, Method: Composition-based stats. Identities = 73/127 (57%), Positives = 98/127 (77%), Gaps = 0/127 (0%) Query 27 GAAAVGATFKLTVTDLNGTKTPRTGVQLPQSAHAPLSLPFELFGLGQTNNYVEEFFLGLP 86 G A G TFK+TV D+NG K+ R GVQ QSAH PL LP+ LFGLG+T+NYVEEF++G+P Sbjct 573 GGNAHGPTFKITVIDVNGVKSSRIGVQKSQSAHFPLQLPYVLFGLGRTSNYVEEFYVGMP 632 Query 87 LAQLTSHNMWVSLIPNSQVIVMPYPLEKPSSWQLELSVHPSRSFANILITTVICLLLVAL 146 + +NMWVS+IPNS +IV+PYPL + WQ++LSV+PS+ F +IL T+ICL ++ + Sbjct 633 THEQKYYNMWVSIIPNSHIIVIPYPLNNSNKWQIQLSVNPSKKFYSILYITLICLSVIGV 692 Query 147 IIFILDR 153 +IFILDR Sbjct 693 LIFILDR 699 Lambda K H 0.319 0.135 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23213563385 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40