bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_3373_orf1 Length=121 Score E Sequences producing significant alignments: (Bits) Value 4959.DEHA0A10736g 77.8 8e-14 > 4959.DEHA0A10736g Length=2211 Score = 77.8 bits (190), Expect = 8e-14, Method: Composition-based stats. Identities = 43/87 (49%), Positives = 54/87 (62%), Gaps = 11/87 (12%) Query 40 DDPNSRNLVAEVSRKEPQVFVSPVN-----PSCHQVKVLAIDCGMKTNIYRQFLYSNFPD 94 DDPN +NLVA+VS KEP V +P N + +++LA+D GMK N R F+ Sbjct 187 DDPNVKNLVAKVSTKEP-VLYTPKNDVKVGKNGKPLRILAVDVGMKYNQIRCFIRRG--- 242 Query 95 CNVVLKAVPWDYDISNDSFDGLFISNG 121 V LK VPWDYD S + +DGLFISNG Sbjct 243 --VELKVVPWDYDFSTEEYDGLFISNG 267 Lambda K H 0.319 0.132 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22998535989 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40