bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_3236_orf1 Length=158 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd3_1860 80.9 1e-14 > 5807.cgd3_1860 Length=568 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 14/126 (11%) Query 1 DIDECSKQLHACSHQCVNTHASYLCLCPPSMYLDADEKKCLHNKTCLEDPTICTGDFVCA 60 DIDEC + H+CSH CVNT S++C CP LD +++ C+ C E+ + +F C Sbjct 218 DIDECMEGSHSCSHICVNTRGSFVCECPKGYTLDKNQQDCIDINECQENSGLGPCEFGCK 277 Query 61 RDPMKGQWVCRCPEGFVEDKKTADDKNGHKCVDVDECEQGYPQRGLNPCPDPIRPSCLNI 120 P G + C+CP G+ DKKT KC+D+DEC++ N C C N Sbjct 278 NLP--GGFECQCPSGYKLDKKT------QKCIDIDECKEEK-----NLCT-GFGEVCFNK 323 Query 121 TGGFQC 126 GGF+C Sbjct 324 KGGFEC 329 Lambda K H 0.322 0.138 0.474 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 25621323489 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40