bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_3233_orf1 Length=89 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL3P3.13 100 9e-21 > 5833.MAL3P3.13 Length=955 Score = 100 bits (250), Expect = 9e-21, Method: Composition-based stats. Identities = 42/77 (54%), Positives = 58/77 (75%), Gaps = 0/77 (0%) Query 3 RPGGLWANVGPLLYHYAETPHEMSVEFSAEEILAVVRNWFNLLKVEWRDCYYTSNRKSMM 62 +P LW+N+GPLLYHYAE P+EMS+E + +EI ++ WF + +++W D YYT+N SMM Sbjct 877 KPNSLWSNIGPLLYHYAEMPNEMSIELAWDEIQIIISKWFTIKEIKWIDNYYTTNFDSMM 936 Query 63 QVQYHCLHFVGIRNEEP 79 QVQYHC+ F IRN+ P Sbjct 937 QVQYHCVFFSAIRNDIP 953 Lambda K H 0.322 0.137 0.465 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23068210110 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40