bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_3218_orf1
Length=84
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0174 80.1 2e-14
> 5833.PF11_0174
Length=700
Score = 80.1 bits (196), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 14/78 (17%)
Query 1 GWGETDAAAATTATPAAAGDSGKL-KYWIVRNTWGSSWGKGGYFLLIRGVNAGGIESQAS 59
GWGE + +GKL KYWI RN+WG+ WGK GYF ++RG N GIESQ+
Sbjct 630 GWGEEEI-------------NGKLYKYWIGRNSWGNGWGKEGYFKILRGQNFSGIESQSL 676
Query 60 FIDPDLTRGKGKQLFDSL 77
FI+PD +RG GK L + +
Sbjct 677 FIEPDFSRGAGKILLEKM 694
Lambda K H
0.314 0.132 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22587329789
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40