bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_3107_orf1
Length=144
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFL0895c 98.6 5e-20
> 5833.PFL0895c
Length=1061
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 91/146 (62%), Gaps = 3/146 (2%)
Query 2 MPLYLLELFSLSLEEKEKGDFSTRKASMQRQMETGLKDVEHLLTTAFDPSPD---YQTLA 58
+PLYLLELFS+ +E+KEK DF T + SM ++ G K+V LL F+ + + L
Sbjct 266 LPLYLLELFSIPIEQKEKNDFLTNRISMYSKILNGRKNVLDLLLNKFENDCNDSIKKELI 325
Query 59 DFFSPHKFKSELNNKFQALLSEQLSSLERRLTRKRRDTQKKIAELEDQLVQQSPQSIREY 118
D F KFK E+N+KF +L +QL +E +L +K+ +LE+ + + S+RE
Sbjct 326 DCFDVEKFKQEVNSKFMNILIQQLRKVEVKLEKKKAKMDFYNKKLEELYNKGNILSVREQ 385
Query 119 VKLYLRELLQIVTELMTGNYVIIRLP 144
VKLY+REL+ IV+ L+TGNY I+ LP
Sbjct 386 VKLYIRELVNIVSNLLTGNYPILNLP 411
Lambda K H
0.317 0.133 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22567178795
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40