bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_3026_orf1 Length=169 Score E Sequences producing significant alignments: (Bits) Value 5833.PF08_0125 236 3e-61 > 5833.PF08_0125 Length=452 Score = 236 bits (601), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 101/169 (59%), Positives = 138/169 (81%), Gaps = 0/169 (0%) Query 1 TVMAACTATLRYPSSLSSSLLSLLSCLVPVPRCHYLMCGYTPITLERCVSTVQKTTVMDI 60 VM+A T TLRYP S+++ ++SL+S L+ P+CH+L+ YTPIT+++ +S VQKTTV+D+ Sbjct 235 NVMSASTTTLRYPGSMNNDMISLISSLIINPKCHFLITSYTPITIDKHISNVQKTTVLDV 294 Query 61 MRRLTQSKNIMVSTSLRRGLYMSLLNVIRGEADPMQVHKSLQRIRERQLLQFIRWAPASP 120 M+RL +KNIMVS +RRG+Y+S+LN+IRGE DP QVHK LQRIR+R+L+ FI+W PAS Sbjct 295 MKRLLHTKNIMVSAPVRRGMYISILNIIRGETDPTQVHKGLQRIRDRKLVNFIKWNPASI 354 Query 121 QVVLARASPFNPQKHKCAGLMLANHTAITSLFERCVVQYDRLFKRKAFL 169 QV LA+ SP +HK GLM+ANHT+I++LFERCV Q+DRL+KR+AFL Sbjct 355 QVTLAKQSPHVVSQHKVCGLMMANHTSISTLFERCVTQFDRLYKRRAFL 403 Lambda K H 0.327 0.134 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 30997188850 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40