bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_3012_orf2
Length=119
Score E
Sequences producing significant alignments: (Bits) Value
5833.MAL3P4.18 103 2e-21
> 5833.MAL3P4.18
Length=953
Score = 103 bits (256), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/101 (45%), Positives = 70/101 (69%), Gaps = 11/101 (10%)
Query 2 YGGFAGVPATMMVEACHPAFCSRGQIEVDGDVMMSTYVRSESSPSVSWKVGSFQAFVEAK 61
Y F+ VP T+MVEAC+P F ++ +++ YV E++ + WK GS Q F++++
Sbjct 227 YNNFSNVPCTIMVEACNPHFNNKSKLK---------YVDKETN--LKWKCGSLQEFIDSR 275
Query 62 ECVGNFDARLFSVGDVHRVAIFDLRVMNLDRNGRNILVAPV 102
E VGN+D + FS+ D+H++AI D+RVMNLDRN NILV+P+
Sbjct 276 ESVGNYDYKQFSIRDIHKIAILDIRVMNLDRNDGNILVSPL 316
Lambda K H
0.321 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22381075488
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40