bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_3004_orf1 Length=108 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_3450 75.1 5e-13 > 5807.cgd7_3450 Length=635 Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 2/98 (2%) Query 1 FSSPMYVCVTFALCALFFEVTAIQFWSITYFQEVFRYPIGTVLIAFNITAATAPILGVLF 60 ++ +Y+ L +++ VTA+QFW+ Y Q+++ G + ++F+ TA AP G++F Sbjct 427 LANSIYMLSITTLSVIYYVVTAVQFWTTRYLQQIYTTRDGIIFMSFSATAVIAPTTGIVF 486 Query 61 GGWLIDFIGGYKDERGMRRTLLILFCFAFSCFLLGVGA 98 G++IDFIGGYK ERG+ T+ LFC + F GA Sbjct 487 SGFIIDFIGGYKSERGLFYTM--LFCMVSAIFATLFGA 522 Lambda K H 0.336 0.148 0.509 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22451482439 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40