bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2993_orf5 Length=60 Score E Sequences producing significant alignments: (Bits) Value 167879.CPS_4104 92.0 5e-18 > 167879.CPS_4104 Length=320 Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 41/59 (69%), Positives = 53/59 (89%), Gaps = 0/59 (0%) Query 2 TRERILIKIAATWEGIQAAKQLKEENINCNITLLFSLCQAIAASDAGAYLVSPFVGRIL 60 + +RILIK+A+TWEGI+AA+QL++E INCN+TLLFS QA A ++AGAYL+SPFVGRIL Sbjct 128 SNDRILIKLASTWEGIKAAEQLEQEGINCNLTLLFSFAQARACAEAGAYLISPFVGRIL 186 Lambda K H 0.322 0.135 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22504648851 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40