bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2990_orf1 Length=163 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0477 252 2e-66 > 5833.PF14_0477 Length=500 Score = 252 bits (644), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 114/163 (69%), Positives = 142/163 (87%), Gaps = 0/163 (0%) Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60 SGRH+QE LFEEM QV +++ P++I+FV+DSHIGQ+C+DQA AF SVS+GS+IITK+D Sbjct 192 SGRHKQENELFEEMIQVENSIQPEEIIFVIDSHIGQSCHDQAMAFKNSVSLGSIIITKID 251 Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120 G+AKGGGALSAVAATG PI F+G+GEH +DF+ F+A SFVSRLLGLGD+ GLV+T+KEVI Sbjct 252 GHAKGGGALSAVAATGCPITFIGTGEHVNDFEKFEAKSFVSRLLGLGDISGLVSTIKEVI 311 Query 121 SAEKQQEMIERISKGKFTLQDMYDQFQNVLKMGPISKVMSMIP 163 +KQ E++ R+SKGKF L+DMYDQFQNV KMG +SKVMSMIP Sbjct 312 DIDKQPELMNRLSKGKFVLRDMYDQFQNVFKMGSLSKVMSMIP 354 Lambda K H 0.319 0.135 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 28009217385 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40