bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2980_orf2 Length=104 Score E Sequences producing significant alignments: (Bits) Value 4952.YALI0E14399g 63.2 2e-09 > 4952.YALI0E14399g Length=814 Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 2/91 (2%) Query 3 HDHVTARHRGQKKTFLSLSKLYYWPGMRTYTTAYVESCTQCRASKPLNQKPAGFLQQLII 62 HD A H G K++ L++ YYWP M + + SC C+ +K P G L+QL + Sbjct 389 HDAPLAGHYGYFKSYERLARAYYWPRMIDHMRNHTRSCLICQTTKARRAPPQGLLKQLPV 448 Query 63 PSRRWSYVSLDFITDLQLTKTGDDSILCWLT 93 P+ W +++DFI + T G ++I W+T Sbjct 449 PTGNWQEITMDFIGGIPTTHRGHNNI--WVT 477 Lambda K H 0.322 0.133 0.445 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22759408663 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40